RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 NUP188Q5SRE5 1749 aa17.54■□□□□ 0.4
PMS1-201ENST00000342075 CCDC87Q9NVE4 849 aa17.54■□□□□ 0.4
PMS1-201ENST00000342075 N4BP2Q86UW6 1770 aaPredicted RBP17.54■□□□□ 0.4
PMS1-201ENST00000342075 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
PMS1-201ENST00000342075 CHMP4AQ9BY43 222 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 GOLGB1Q14789 3259 aaKnown RBP17.53■□□□□ 0.4
PMS1-201ENST00000342075 NBPF7P0C2Y1 421 aaPredicted RBP17.53■□□□□ 0.4
PMS1-201ENST00000342075 CCT4P50991 539 aaKnown RBP17.53■□□□□ 0.4
PMS1-201ENST00000342075 HLFQ16534 295 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 USP44Q9H0E7 712 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 ERBB4Q15303 1308 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 PROM2Q8N271 834 aa17.53■□□□□ 0.4
PMS1-201ENST00000342075 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
PMS1-201ENST00000342075 RTL5Q5HYW3 569 aaPredicted RBP17.52■□□□□ 0.4
PMS1-201ENST00000342075 AFDNP55196 1824 aaKnown RBP17.52■□□□□ 0.39
PMS1-201ENST00000342075 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
PMS1-201ENST00000342075 APBA3O96018 575 aa17.51■□□□□ 0.39
PMS1-201ENST00000342075 SIRT2Q8IXJ6 389 aa17.51■□□□□ 0.39
PMS1-201ENST00000342075 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
PMS1-201ENST00000342075 CICQ96RK0 1608 aaPredicted RBP17.51■□□□□ 0.39
PMS1-201ENST00000342075 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
PMS1-201ENST00000342075 EIF5P55010 431 aaKnown RBP17.5■□□□□ 0.39
PMS1-201ENST00000342075 TNS1Q9HBL0 1735 aaKnown RBP17.5■□□□□ 0.39
PMS1-201ENST00000342075 RREB1Q92766 1687 aa17.5■□□□□ 0.39
PMS1-201ENST00000342075 GNPATO15228 680 aa17.49■□□□□ 0.39
PMS1-201ENST00000342075 PHF14O94880 888 aa17.49■□□□□ 0.39
PMS1-201ENST00000342075 DZIP3Q86Y13 1208 aaKnown RBP17.49■□□□□ 0.39
PMS1-201ENST00000342075 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
PMS1-201ENST00000342075 GPTP24298 496 aa17.49■□□□□ 0.39
PMS1-201ENST00000342075 IL6STP40189 918 aaPredicted RBP17.48■□□□□ 0.39
PMS1-201ENST00000342075 ATP10DQ9P241 1426 aa17.48■□□□□ 0.39
PMS1-201ENST00000342075 LRRFIP2Q9Y608 721 aaKnown RBP17.48■□□□□ 0.39
PMS1-201ENST00000342075 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
PMS1-201ENST00000342075 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
PMS1-201ENST00000342075 C4BP0C0L5 1744 aa17.48■□□□□ 0.39
PMS1-201ENST00000342075 LINS1Q8NG48 757 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 NUP98P52948 1817 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 KIF6Q6ZMV9 814 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 COL15A1P39059 1388 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 BCL11AQ9H165 835 aa17.47■□□□□ 0.39
PMS1-201ENST00000342075 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
PMS1-201ENST00000342075 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
PMS1-201ENST00000342075 SRP68Q9UHB9 627 aaKnown RBP17.46■□□□□ 0.39
PMS1-201ENST00000342075 UBTFL1P0CB47 393 aaPredicted RBP17.45■□□□□ 0.38
PMS1-201ENST00000342075 GCKRQ14397 625 aa17.45■□□□□ 0.38
PMS1-201ENST00000342075 SYNE4Q8N205 404 aa17.45■□□□□ 0.38
PMS1-201ENST00000342075 CEP85Q6P2H3 762 aa17.45■□□□□ 0.38
PMS1-201ENST00000342075 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
PMS1-201ENST00000342075 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
PMS1-201ENST00000342075 PNMA6EA0A0J9YXQ4 647 aa17.44■□□□□ 0.38
PMS1-201ENST00000342075 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
PMS1-201ENST00000342075 EN1Q05925 392 aaPredicted RBP17.44■□□□□ 0.38
PMS1-201ENST00000342075 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
PMS1-201ENST00000342075 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
PMS1-201ENST00000342075 KAZALD1Q96I82 304 aa17.44■□□□□ 0.38
PMS1-201ENST00000342075 GRM8O00222 908 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 SUCLG2Q96I99 432 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 GNAI2P04899 355 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 GIGYF2Q6Y7W6 1299 aaKnown RBP17.43■□□□□ 0.38
PMS1-201ENST00000342075 DEFB132Q7Z7B7 95 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
PMS1-201ENST00000342075 A0A087WZG4 1122 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 ALDH1L1O75891 902 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 ZNF827Q17R98 1081 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 EZH2Q15910 746 aaKnown RBP17.42■□□□□ 0.38
PMS1-201ENST00000342075 AK7Q96M32 723 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
PMS1-201ENST00000342075 UBR3Q6ZT12 1888 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 GNAI3P08754 354 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 ARHGEF1Q92888 912 aaKnown RBP17.41■□□□□ 0.38
PMS1-201ENST00000342075 APBB1O00213 710 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 ANKRD36CQ5JPF3 1778 aa17.41■□□□□ 0.38
PMS1-201ENST00000342075 FAM89AQ96GI7 184 aa17.4■□□□□ 0.38
PMS1-201ENST00000342075 ISCA1Q9BUE6 129 aa17.4■□□□□ 0.38
PMS1-201ENST00000342075 BICC1Q9H694 974 aaKnown RBP17.4■□□□□ 0.38
PMS1-201ENST00000342075 RTCBQ9Y3I0 505 aaKnown RBP17.4■□□□□ 0.38
PMS1-201ENST00000342075 ANKRD44Q8N8A2 993 aa17.4■□□□□ 0.38
PMS1-201ENST00000342075 BCL2L12Q9HB09 334 aa17.4■□□□□ 0.38
PMS1-201ENST00000342075 PLSCR1O15162 318 aa17.39■□□□□ 0.38
PMS1-201ENST00000342075 CENPQQ7L2Z9 268 aaPredicted RBP17.39■□□□□ 0.38
PMS1-201ENST00000342075 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.38
PMS1-201ENST00000342075 BCORQ6W2J9 1755 aa17.39■□□□□ 0.37
PMS1-201ENST00000342075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.39■□□□□ 0.37
PMS1-201ENST00000342075 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
PMS1-201ENST00000342075 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
PMS1-201ENST00000342075 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
PMS1-201ENST00000342075 HDAC1Q13547 482 aaPredicted RBP17.39■□□□□ 0.37
PMS1-201ENST00000342075 AAMPQ13685 434 aa17.39■□□□□ 0.37
PMS1-201ENST00000342075 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
PMS1-201ENST00000342075 CASP7P55210 303 aa17.38■□□□□ 0.37
PMS1-201ENST00000342075 PPP1R42Q7Z4L9 355 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms