RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 NLRP3Q96P20 1036 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 CFAP45Q9UL16 551 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 LMBR1LQ6UX01 489 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 ANKRD18AQ8IVF6 992 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 RNF214Q8ND24 703 aa23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 ZNF622Q969S3 477 aaKnown RBP eCLIP23.07■■□□□ 1.28
SEMA6C-201ENST00000341697 PTPRTO14522 1441 aa23.06■■□□□ 1.28
SEMA6C-201ENST00000341697 ATP8B2P98198 1209 aa23.06■■□□□ 1.28
SEMA6C-201ENST00000341697 CCAR2Q8N163 923 aaKnown RBP23.06■■□□□ 1.28
SEMA6C-201ENST00000341697 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
SEMA6C-201ENST00000341697 IQCA1Q86XH1 822 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 CCDC196A0A1B0GTZ2 297 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 MRE11P49959 708 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 DDX11Q96FC9 970 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 UTP14AQ9BVJ6 771 aaKnown RBP23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 FAM13BQ9NYF5 915 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 HOMER1Q86YM7 354 aa23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 ZNF444Q8N0Y2 327 aaPredicted RBP23.05■■□□□ 1.28
SEMA6C-201ENST00000341697 TTC22Q5TAA0 569 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 SPTY2D1Q68D10 685 aaPredicted RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 PREX2Q70Z35 1606 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 BABAM1Q9NWV8 329 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 EFCAB6Q5THR3 1501 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 NASPP49321 788 aaPredicted RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 A0A0U1RQG5 324 aaPredicted RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 RANBP6O60518 1105 aaKnown RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 SPATA32Q96LK8 384 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 TSPY26PQ9H489 355 aa23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 SH2B1Q9NRF2 756 aaPredicted RBP23.04■■□□□ 1.28
SEMA6C-201ENST00000341697 NUCB1Q02818 461 aa23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 PIBF1Q8WXW3 757 aa23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 ZNF592Q92610 1267 aa23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 CCDC83Q8IWF9 413 aa23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 IL15P40933 162 aaPredicted RBP23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 CCDC70Q6NSX1 233 aa23.03■■□□□ 1.28
SEMA6C-201ENST00000341697 NYXQ9GZU5 481 aa23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 PCDHB15Q9Y5E8 787 aa23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 BAG3O95817 575 aa23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 ATP2B3Q16720 1220 aa23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 TBC1D9Q6ZT07 1266 aa23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 CTCFLQ8NI51 663 aaPredicted RBP23.02■■□□□ 1.28
SEMA6C-201ENST00000341697 PLEKHG1Q9ULL1 1385 aa23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 TSHZ3Q63HK5 1081 aa23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 GOLGA6L1Q8N7Z2 621 aa23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 DDX21Q9NR30 783 aaKnown RBP eCLIP23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 TRIM5Q9C035 493 aa23.01■■□□□ 1.27
SEMA6C-201ENST00000341697 OFD1O75665 1012 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 TPTE2Q6XPS3 522 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 SEC63Q9UGP8 760 aaKnown RBP23■■□□□ 1.27
SEMA6C-201ENST00000341697 ZNF790Q6PG37 636 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 TNMDQ9H2S6 317 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 FILIP1LQ4L180 1135 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 MAGEC2Q9UBF1 373 aaPredicted RBP23■■□□□ 1.27
SEMA6C-201ENST00000341697 HECW2Q9P2P5 1572 aa23■■□□□ 1.27
SEMA6C-201ENST00000341697 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
SEMA6C-201ENST00000341697 SLC12A7Q9Y666 1083 aa22.99■■□□□ 1.27
SEMA6C-201ENST00000341697 PDILTQ8N807 584 aa22.99■■□□□ 1.27
SEMA6C-201ENST00000341697 TMEM132AQ24JP5 1023 aa22.99■■□□□ 1.27
SEMA6C-201ENST00000341697 CWF19L2Q2TBE0 894 aaKnown RBP22.98■■□□□ 1.27
SEMA6C-201ENST00000341697 IFIT3O14879 490 aaKnown RBP22.98■■□□□ 1.27
SEMA6C-201ENST00000341697 CCDC192P0DO97 292 aa22.98■■□□□ 1.27
SEMA6C-201ENST00000341697 ZNF76P36508 570 aa22.98■■□□□ 1.27
SEMA6C-201ENST00000341697 LIMCH1Q9UPQ0 1083 aa22.98■■□□□ 1.27
SEMA6C-201ENST00000341697 TFCP2L1Q9NZI6 479 aa22.97■■□□□ 1.27
SEMA6C-201ENST00000341697 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
SEMA6C-201ENST00000341697 SBNO2Q9Y2G9 1366 aa22.97■■□□□ 1.27
SEMA6C-201ENST00000341697 KAT6BQ8WYB5 2073 aa22.97■■□□□ 1.27
SEMA6C-201ENST00000341697 ZFYP08048 801 aaPredicted RBP22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 DACH1Q9UI36 760 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 PDE1AP54750 535 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 STIM1Q13586 685 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 SMC2O95347 1197 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 CEP131Q9UPN4 1083 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 HOXB7P09629 217 aa22.96■■□□□ 1.27
SEMA6C-201ENST00000341697 IRS4O14654 1257 aaPredicted RBP22.95■■□□□ 1.27
SEMA6C-201ENST00000341697 GSTO1P78417 241 aa22.95■■□□□ 1.27
SEMA6C-201ENST00000341697 ARID3AQ99856 593 aa22.95■■□□□ 1.27
SEMA6C-201ENST00000341697 PHAXQ9H814 394 aaKnown RBP22.95■■□□□ 1.27
SEMA6C-201ENST00000341697 METP08581 1390 aa22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 NAP1L1P55209 391 aaKnown RBP22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 UGGT1Q9NYU2 1555 aa22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 HMGN5P82970 282 aaKnown RBP22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 ZHX3Q9H4I2 956 aa22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 HMG20BQ9P0W2 317 aa22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 BMP2KQ9NSY1 1161 aaPredicted RBP22.95■■□□□ 1.26
SEMA6C-201ENST00000341697 FERMT3Q86UX7 667 aa22.94■■□□□ 1.26
SEMA6C-201ENST00000341697 PDE4BQ07343 736 aa22.94■■□□□ 1.26
SEMA6C-201ENST00000341697 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
SEMA6C-201ENST00000341697 CATIPQ7Z7H3 387 aa22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 ZGPATQ8N5A5 531 aaKnown RBP22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 C8orf76Q96K31 380 aa22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 SDSP20132 328 aa22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 PA2G4Q9UQ80 394 aaKnown RBP22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 NPHP4O75161 1426 aaPredicted RBP22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 CRNKL1Q9BZJ0 848 aaKnown RBP22.93■■□□□ 1.26
SEMA6C-201ENST00000341697 LGR6Q9HBX8 967 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms