RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
RANBP3-202ENST00000340578 KLHL40Q2TBA0 621 aa13.76□□□□□ -0.21
RANBP3-202ENST00000340578 CLASRPQ8N2M8 674 aaKnown RBP13.76□□□□□ -0.21
RANBP3-202ENST00000340578 CSB-PGBD3P0DP91 1061 aa13.76□□□□□ -0.21
RANBP3-202ENST00000340578 MCM2P49736 904 aa13.76□□□□□ -0.21
RANBP3-202ENST00000340578 ANAPC15P60006 121 aa13.76□□□□□ -0.21
RANBP3-202ENST00000340578 CWC27Q6UX04 472 aaKnown RBP13.76□□□□□ -0.21
RANBP3-202ENST00000340578 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
RANBP3-202ENST00000340578 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
RANBP3-202ENST00000340578 MYL6BP14649 208 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 ZDHHC9Q9Y397 364 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 CAVIN1Q6NZI2 390 aaKnown RBP13.75□□□□□ -0.21
RANBP3-202ENST00000340578 HYPKQ9NX55 129 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 ERBB3P21860 1342 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 ALDH1L1O75891 902 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
RANBP3-202ENST00000340578 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
RANBP3-202ENST00000340578 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
RANBP3-202ENST00000340578 MED1Q15648 1581 aaPredicted RBP13.75□□□□□ -0.21
RANBP3-202ENST00000340578 IFIT2P09913 472 aaKnown RBP13.74□□□□□ -0.21
RANBP3-202ENST00000340578 ATF3P18847 181 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 LMBRD1Q9NUN5 540 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 AK9Q5TCS8 1911 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
RANBP3-202ENST00000340578 NFATC2IPQ8NCF5 419 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 SGSM2O43147 1006 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 MAPK8IP2Q13387 824 aaPredicted RBP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 FOXD4L6Q3SYB3 417 aaPredicted RBP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 FOXD4L3Q6VB84 417 aaPredicted RBP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 GLRX3O76003 335 aaKnown RBP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 HSPA4P34932 840 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 TPRNQ4KMQ1 711 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 DDX21Q9NR30 783 aaKnown RBP eCLIP13.73□□□□□ -0.21
RANBP3-202ENST00000340578 DIAPH3Q9NSV4 1193 aa13.73□□□□□ -0.21
RANBP3-202ENST00000340578 GRM8O00222 908 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 SUCLG2Q96I99 432 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 SIL1Q9H173 461 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 CHRNA2Q15822 529 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 AACSQ86V21 672 aa13.72□□□□□ -0.21
RANBP3-202ENST00000340578 LARP6Q9BRS8 491 aaKnown RBP13.72□□□□□ -0.21
RANBP3-202ENST00000340578 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.21
RANBP3-202ENST00000340578 MTX1Q13505 466 aa13.71□□□□□ -0.21
RANBP3-202ENST00000340578 GPATCH3Q96I76 525 aa13.71□□□□□ -0.21
RANBP3-202ENST00000340578 BICC1Q9H694 974 aaKnown RBP13.71□□□□□ -0.21
RANBP3-202ENST00000340578 IRX3P78415 501 aaPredicted RBP13.71□□□□□ -0.21
RANBP3-202ENST00000340578 G3BP1Q13283 466 aaKnown RBP eCLIP13.71□□□□□ -0.21
RANBP3-202ENST00000340578 ECHDC1Q9NTX5 307 aa13.71□□□□□ -0.21
RANBP3-202ENST00000340578 SLIT3O75094 1523 aa13.71□□□□□ -0.22
RANBP3-202ENST00000340578 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.22
RANBP3-202ENST00000340578 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.22
RANBP3-202ENST00000340578 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 RAD50Q92878 1312 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 CUL4AQ13619 759 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 TRIM44Q96DX7 344 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-202ENST00000340578 KDM3BQ7LBC6 1761 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-202ENST00000340578 CLCN1P35523 988 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 PDIA6Q15084 440 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-202ENST00000340578 XAGE3Q8WTP9 111 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
RANBP3-202ENST00000340578 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
RANBP3-202ENST00000340578 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 HEG1Q9ULI3 1381 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 LMO7Q8WWI1 1683 aa13.7□□□□□ -0.22
RANBP3-202ENST00000340578 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 ZSCAN23Q3MJ62 389 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 COPS6Q7L5N1 327 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 RASEFQ8IZ41 740 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 TTC5Q8N0Z6 440 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 PHKG2P15735 406 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 JARID2Q92833 1246 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 MYD88Q99836 296 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 GPT2Q8TD30 523 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 RUFY2Q8WXA3 655 aa13.69□□□□□ -0.22
RANBP3-202ENST00000340578 INTS4Q96HW7 963 aaKnown RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
RANBP3-202ENST00000340578 IGKV5-2P06315 115 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 CPA1P15085 419 aa13.68□□□□□ -0.22
RANBP3-202ENST00000340578 PPP4R3BQ5MIZ7 849 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms