RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 PRELPP51888 382 aa18.92■□□□□ 0.62
COMMD4-202ENST00000338995 TNRC6CQ9HCJ0 1690 aaKnown RBP18.92■□□□□ 0.62
COMMD4-202ENST00000338995 SRGNP10124 158 aa18.91■□□□□ 0.62
COMMD4-202ENST00000338995 LTBP3Q9NS15 1303 aa18.91■□□□□ 0.62
COMMD4-202ENST00000338995 RGL2O15211 777 aa18.9■□□□□ 0.62
COMMD4-202ENST00000338995 PPP2R1AP30153 589 aa18.9■□□□□ 0.62
COMMD4-202ENST00000338995 TAF7Q15545 349 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-202ENST00000338995 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
COMMD4-202ENST00000338995 GTF2E1P29083 439 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-202ENST00000338995 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
COMMD4-202ENST00000338995 MCM10Q7L590 875 aa18.89■□□□□ 0.61
COMMD4-202ENST00000338995 NPR1P16066 1061 aa18.88■□□□□ 0.61
COMMD4-202ENST00000338995 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
COMMD4-202ENST00000338995 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
COMMD4-202ENST00000338995 NIP7Q9Y221 180 aaKnown RBP eCLIP18.87■□□□□ 0.61
COMMD4-202ENST00000338995 CCDC88AQ3V6T2 1871 aa18.86■□□□□ 0.61
COMMD4-202ENST00000338995 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
COMMD4-202ENST00000338995 POTECB2RU33 542 aa18.86■□□□□ 0.61
COMMD4-202ENST00000338995 ALDH1B1P30837 517 aa18.86■□□□□ 0.61
COMMD4-202ENST00000338995 PIP4K2AP48426 406 aaPredicted RBP18.86■□□□□ 0.61
COMMD4-202ENST00000338995 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
COMMD4-202ENST00000338995 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
COMMD4-202ENST00000338995 CHADLQ6NUI6 762 aa18.85■□□□□ 0.61
COMMD4-202ENST00000338995 RTKN2Q8IZC4 609 aa18.85■□□□□ 0.61
COMMD4-202ENST00000338995 PRAMEF22A3QJZ6 481 aa18.84■□□□□ 0.61
COMMD4-202ENST00000338995 DDNO94850 711 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-202ENST00000338995 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
COMMD4-202ENST00000338995 SIPA1L3O60292 1781 aaPredicted RBP18.83■□□□□ 0.61
COMMD4-202ENST00000338995 KLRG2A4D1S0 409 aaPredicted RBP18.83■□□□□ 0.6
COMMD4-202ENST00000338995 NYXQ9GZU5 481 aa18.83■□□□□ 0.6
COMMD4-202ENST00000338995 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
COMMD4-202ENST00000338995 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
COMMD4-202ENST00000338995 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
COMMD4-202ENST00000338995 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
COMMD4-202ENST00000338995 SCN7AQ01118 1682 aa18.82■□□□□ 0.6
COMMD4-202ENST00000338995 FKBP4Q02790 459 aaKnown RBP eCLIP18.81■□□□□ 0.6
COMMD4-202ENST00000338995 COL13A1Q5TAT6 717 aaPredicted RBP18.81■□□□□ 0.6
COMMD4-202ENST00000338995 C7orf43Q8WVR3 580 aa18.81■□□□□ 0.6
COMMD4-202ENST00000338995 CREBZFQ9NS37 354 aa18.81■□□□□ 0.6
COMMD4-202ENST00000338995 ANKRD31Q8N7Z5 1873 aa18.81■□□□□ 0.6
COMMD4-202ENST00000338995 ERVV-1B6SEH8 477 aa18.8■□□□□ 0.6
COMMD4-202ENST00000338995 TNS4Q8IZW8 715 aa18.8■□□□□ 0.6
COMMD4-202ENST00000338995 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
COMMD4-202ENST00000338995 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
COMMD4-202ENST00000338995 KIF6Q6ZMV9 814 aa18.79■□□□□ 0.6
COMMD4-202ENST00000338995 LDHDQ86WU2 507 aa18.79■□□□□ 0.6
COMMD4-202ENST00000338995 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
COMMD4-202ENST00000338995 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
COMMD4-202ENST00000338995 DICER1Q9UPY3 1922 aaKnown RBP18.78■□□□□ 0.6
COMMD4-202ENST00000338995 HSPA1AP0DMV8 641 aaKnown RBP18.78■□□□□ 0.6
COMMD4-202ENST00000338995 HSPA1BP0DMV9 641 aaKnown RBP18.78■□□□□ 0.6
COMMD4-202ENST00000338995 HLFQ16534 295 aa18.78■□□□□ 0.6
COMMD4-202ENST00000338995 GRIPAP1Q4V328 841 aa18.78■□□□□ 0.6
COMMD4-202ENST00000338995 CC2D2BQ6DHV5 1058 aa18.78■□□□□ 0.6
COMMD4-202ENST00000338995 L3MBTL3Q96JM7 780 aaPredicted RBP18.78■□□□□ 0.6
COMMD4-202ENST00000338995 RRP7AQ9Y3A4 280 aaKnown RBP18.78■□□□□ 0.6
COMMD4-202ENST00000338995 TIAM2Q8IVF5 1701 aa18.77■□□□□ 0.6
COMMD4-202ENST00000338995 SYNE4Q8N205 404 aa18.77■□□□□ 0.6
COMMD4-202ENST00000338995 JDP2Q8WYK2 163 aa18.77■□□□□ 0.6
COMMD4-202ENST00000338995 TAF1DQ9H5J8 278 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-202ENST00000338995 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-202ENST00000338995 CLEC11AQ9Y240 323 aa18.77■□□□□ 0.6
COMMD4-202ENST00000338995 PNMA8AQ86V59 439 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-202ENST00000338995 RPGRQ92834 1020 aaKnown RBP18.76■□□□□ 0.59
COMMD4-202ENST00000338995 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
COMMD4-202ENST00000338995 HACL1Q9UJ83 578 aa18.76■□□□□ 0.59
COMMD4-202ENST00000338995 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
COMMD4-202ENST00000338995 IARSP41252 1262 aaKnown RBP18.75■□□□□ 0.59
COMMD4-202ENST00000338995 NFE2L2Q16236 605 aa18.75■□□□□ 0.59
COMMD4-202ENST00000338995 EAPPQ56P03 285 aaPredicted RBP18.75■□□□□ 0.59
COMMD4-202ENST00000338995 MAP3K15Q6ZN16 1313 aa18.74■□□□□ 0.59
COMMD4-202ENST00000338995 EIF4A1P60842 406 aaKnown RBP18.74■□□□□ 0.59
COMMD4-202ENST00000338995 MKRN1Q9UHC7 482 aaKnown RBP18.74■□□□□ 0.59
COMMD4-202ENST00000338995 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-202ENST00000338995 MYL6BP14649 208 aa18.73■□□□□ 0.59
COMMD4-202ENST00000338995 EIF6P56537 245 aaKnown RBP18.73■□□□□ 0.59
COMMD4-202ENST00000338995 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
COMMD4-202ENST00000338995 PSMD1Q99460 953 aa18.73■□□□□ 0.59
COMMD4-202ENST00000338995 BCORQ6W2J9 1755 aa18.73■□□□□ 0.59
COMMD4-202ENST00000338995 TMEM88BA6NKF7 163 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 EPHX2P34913 555 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 CRY2Q49AN0 593 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 PPP1R42Q7Z4L9 355 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 NUTM1Q86Y26 1132 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 GPC2Q8N158 579 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 ERBB4Q15303 1308 aa18.72■□□□□ 0.59
COMMD4-202ENST00000338995 FZD9O00144 591 aa18.71■□□□□ 0.59
COMMD4-202ENST00000338995 CAPN15O75808 1086 aa18.71■□□□□ 0.59
COMMD4-202ENST00000338995 PLEKHF1Q96S99 279 aa18.71■□□□□ 0.59
COMMD4-202ENST00000338995 GPTP24298 496 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 HOXA10P31260 410 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-202ENST00000338995 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 OLFM4Q6UX06 510 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 TTLL7Q6ZT98 887 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 NLRP3Q96P20 1036 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 CRAMP1Q96RY5 1269 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
COMMD4-202ENST00000338995 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms