RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 A1BGP04217 495 aa15.46■□□□□ 0.07
CSMD2-202ENST00000338325 STYK1Q6J9G0 422 aa15.46■□□□□ 0.07
CSMD2-202ENST00000338325 CNKSR1Q969H4 720 aa15.46■□□□□ 0.07
CSMD2-202ENST00000338325 SOGA3Q5TF21 947 aa15.45■□□□□ 0.06
CSMD2-202ENST00000338325 PRPF40BQ6NWY9 871 aaKnown RBP15.45■□□□□ 0.06
CSMD2-202ENST00000338325 BTBD11A6QL63 1104 aa15.44■□□□□ 0.06
CSMD2-202ENST00000338325 SRGNP10124 158 aa15.44■□□□□ 0.06
CSMD2-202ENST00000338325 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
CSMD2-202ENST00000338325 DZIP3Q86Y13 1208 aaKnown RBP15.44■□□□□ 0.06
CSMD2-202ENST00000338325 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
CSMD2-202ENST00000338325 KCNQ3O43525 872 aa15.43■□□□□ 0.06
CSMD2-202ENST00000338325 DDNO94850 711 aaPredicted RBP15.43■□□□□ 0.06
CSMD2-202ENST00000338325 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
CSMD2-202ENST00000338325 CREBZFQ9NS37 354 aa15.43■□□□□ 0.06
CSMD2-202ENST00000338325 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
CSMD2-202ENST00000338325 RSPH6AQ9H0K4 717 aa15.42■□□□□ 0.06
CSMD2-202ENST00000338325 LAMB4A4D0S4 1761 aa15.42■□□□□ 0.06
CSMD2-202ENST00000338325 POTEIP0CG38 1075 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 POTEJP0CG39 1038 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 CLEC4GQ6UXB4 293 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 NBPF5PQ86XG9 351 aaPredicted RBP15.41■□□□□ 0.06
CSMD2-202ENST00000338325 PHACTR3Q96KR7 559 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 ZNF652Q9Y2D9 606 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 USP16Q9Y5T5 823 aa15.41■□□□□ 0.06
CSMD2-202ENST00000338325 IQCA1LA6NCM1 817 aa15.4■□□□□ 0.06
CSMD2-202ENST00000338325 PIP4K2AP48426 406 aaPredicted RBP15.4■□□□□ 0.06
CSMD2-202ENST00000338325 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
CSMD2-202ENST00000338325 L3MBTL3Q96JM7 780 aaPredicted RBP15.39■□□□□ 0.05
CSMD2-202ENST00000338325 CFAP53Q96M91 514 aa15.39■□□□□ 0.05
CSMD2-202ENST00000338325 MKRN1Q9UHC7 482 aaKnown RBP15.39■□□□□ 0.05
CSMD2-202ENST00000338325 ADAMTSL1Q8N6G6 1762 aa15.39■□□□□ 0.05
CSMD2-202ENST00000338325 PRAMEF22A3QJZ6 481 aa15.38■□□□□ 0.05
CSMD2-202ENST00000338325 SNRPA1P09661 255 aaKnown RBP15.38■□□□□ 0.05
CSMD2-202ENST00000338325 NPR1P16066 1061 aa15.38■□□□□ 0.05
CSMD2-202ENST00000338325 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
CSMD2-202ENST00000338325 C7orf43Q8WVR3 580 aa15.38■□□□□ 0.05
CSMD2-202ENST00000338325 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSMD2-202ENST00000338325 CNTNAP1P78357 1384 aa15.37■□□□□ 0.05
CSMD2-202ENST00000338325 KLRG2A4D1S0 409 aaPredicted RBP15.37■□□□□ 0.05
CSMD2-202ENST00000338325 RGL2O15211 777 aa15.37■□□□□ 0.05
CSMD2-202ENST00000338325 RTF1Q92541 710 aaKnown RBP15.37■□□□□ 0.05
CSMD2-202ENST00000338325 TAF1DQ9H5J8 278 aaPredicted RBP15.37■□□□□ 0.05
CSMD2-202ENST00000338325 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
CSMD2-202ENST00000338325 PASKQ96RG2 1323 aa15.37■□□□□ 0.05
CSMD2-202ENST00000338325 TPTE2Q6XPS3 522 aa15.36■□□□□ 0.05
CSMD2-202ENST00000338325 MCM10Q7L590 875 aa15.36■□□□□ 0.05
CSMD2-202ENST00000338325 NIP7Q9Y221 180 aaKnown RBP eCLIP15.36■□□□□ 0.05
CSMD2-202ENST00000338325 NUP98P52948 1817 aa15.36■□□□□ 0.05
CSMD2-202ENST00000338325 KDM3BQ7LBC6 1761 aa15.35■□□□□ 0.05
CSMD2-202ENST00000338325 DLG5Q8TDM6 1919 aa15.35■□□□□ 0.05
CSMD2-202ENST00000338325 ZNF541Q9H0D2 1346 aa15.35■□□□□ 0.05
CSMD2-202ENST00000338325 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
CSMD2-202ENST00000338325 NBPF26B4DH59 902 aa15.34■□□□□ 0.05
CSMD2-202ENST00000338325 NBPF10Q6P3W6 841 aaKnown RBP15.34■□□□□ 0.05
CSMD2-202ENST00000338325 RTKN2Q8IZC4 609 aa15.34■□□□□ 0.05
CSMD2-202ENST00000338325 NBPF15Q8N660 670 aa15.34■□□□□ 0.05
CSMD2-202ENST00000338325 U2AF1L5P0DN76 240 aaPredicted RBP15.33■□□□□ 0.05
CSMD2-202ENST00000338325 U2AF1Q01081 240 aaKnown RBP eCLIP15.33■□□□□ 0.05
CSMD2-202ENST00000338325 EAPPQ56P03 285 aaPredicted RBP15.33■□□□□ 0.05
CSMD2-202ENST00000338325 OLFM4Q6UX06 510 aa15.33■□□□□ 0.05
CSMD2-202ENST00000338325 HACL1Q9UJ83 578 aa15.33■□□□□ 0.05
CSMD2-202ENST00000338325 TMEM88BA6NKF7 163 aa15.33■□□□□ 0.04
CSMD2-202ENST00000338325 FAM177BA6PVY3 158 aa15.33■□□□□ 0.04
CSMD2-202ENST00000338325 FOXN1O15353 648 aa15.33■□□□□ 0.04
CSMD2-202ENST00000338325 HTATSF1O43719 755 aaKnown RBP15.33■□□□□ 0.04
CSMD2-202ENST00000338325 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
CSMD2-202ENST00000338325 DCTN1Q14203 1278 aa15.33■□□□□ 0.04
CSMD2-202ENST00000338325 ITGBL1O95965 494 aaPredicted RBP15.32■□□□□ 0.04
CSMD2-202ENST00000338325 EPHX2P34913 555 aa15.32■□□□□ 0.04
CSMD2-202ENST00000338325 IARSP41252 1262 aaKnown RBP15.32■□□□□ 0.04
CSMD2-202ENST00000338325 SNED1Q8TER0 1413 aa15.31■□□□□ 0.04
CSMD2-202ENST00000338325 HLFQ16534 295 aa15.31■□□□□ 0.04
CSMD2-202ENST00000338325 SYNE4Q8N205 404 aa15.31■□□□□ 0.04
CSMD2-202ENST00000338325 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
CSMD2-202ENST00000338325 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
CSMD2-202ENST00000338325 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 FZD9O00144 591 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 GTF2E1P29083 439 aaPredicted RBP15.3■□□□□ 0.04
CSMD2-202ENST00000338325 PPP2R1AP30153 589 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 VEGFBP49765 207 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 TAF7Q15545 349 aaPredicted RBP15.3■□□□□ 0.04
CSMD2-202ENST00000338325 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
CSMD2-202ENST00000338325 AIDAQ96BJ3 306 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 ABCC12Q96J65 1359 aa15.3■□□□□ 0.04
CSMD2-202ENST00000338325 GPC2Q8N158 579 aa15.29■□□□□ 0.04
CSMD2-202ENST00000338325 PSMD1Q99460 953 aa15.29■□□□□ 0.04
CSMD2-202ENST00000338325 NYXQ9GZU5 481 aa15.29■□□□□ 0.04
CSMD2-202ENST00000338325 RIC1Q4ADV7 1423 aa15.29■□□□□ 0.04
CSMD2-202ENST00000338325 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
CSMD2-202ENST00000338325 CRY2Q49AN0 593 aa15.28■□□□□ 0.04
CSMD2-202ENST00000338325 LTBP1Q14766 1721 aa15.28■□□□□ 0.04
CSMD2-202ENST00000338325 COL4A5P29400 1685 aa15.28■□□□□ 0.04
CSMD2-202ENST00000338325 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
CSMD2-202ENST00000338325 JDP2Q8WYK2 163 aa15.27■□□□□ 0.04
CSMD2-202ENST00000338325 MIS18AQ9NYP9 233 aa15.27■□□□□ 0.04
CSMD2-202ENST00000338325 IBTKQ9P2D0 1353 aaPredicted RBP15.27■□□□□ 0.04
CSMD2-202ENST00000338325 TRPM7Q96QT4 1865 aa15.27■□□□□ 0.04
CSMD2-202ENST00000338325 RASSF10A6NK89 507 aa15.27■□□□□ 0.03
CSMD2-202ENST00000338325 ERVV-1B6SEH8 477 aa15.27■□□□□ 0.03
CSMD2-202ENST00000338325 MAP1SQ66K74 1059 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms