RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
UBE2D3-202ENST00000338145 USP6P35125 1406 aa13.4□□□□□ -0.26
UBE2D3-202ENST00000338145 MS4A1P11836 297 aa13.4□□□□□ -0.26
UBE2D3-202ENST00000338145 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
UBE2D3-202ENST00000338145 CCDC7Q96M83 1385 aa13.4□□□□□ -0.26
UBE2D3-202ENST00000338145 USP46P62068 366 aa13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 CABP1Q9NZU7 370 aa13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 WNK3Q9BYP7 1800 aa13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
UBE2D3-202ENST00000338145 COL18A1P39060 1754 aa13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 RAB3GAP2Q9H2M9 1393 aa13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 POLD1P28340 1107 aa13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 APLP1P51693 650 aa13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 DDRGK1Q96HY6 314 aa13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
UBE2D3-202ENST00000338145 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
UBE2D3-202ENST00000338145 KIAA1210Q9ULL0 1709 aa13.36□□□□□ -0.27
UBE2D3-202ENST00000338145 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
UBE2D3-202ENST00000338145 GRIN3BO60391 1043 aa13.35□□□□□ -0.27
UBE2D3-202ENST00000338145 KDM4AO75164 1064 aa13.35□□□□□ -0.27
UBE2D3-202ENST00000338145 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
UBE2D3-202ENST00000338145 SLC27A3Q5K4L6 730 aa13.34□□□□□ -0.27
UBE2D3-202ENST00000338145 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
UBE2D3-202ENST00000338145 NHSQ6T4R5 1651 aa13.34□□□□□ -0.27
UBE2D3-202ENST00000338145 PAPPAQ13219 1627 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 ZNF827Q17R98 1081 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 ACSBG1Q96GR2 724 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 ABCC6O95255 1503 aa13.33□□□□□ -0.28
UBE2D3-202ENST00000338145 IL2RBP14784 551 aa13.32□□□□□ -0.28
UBE2D3-202ENST00000338145 NBPF1Q3BBV0 1214 aa13.32□□□□□ -0.28
UBE2D3-202ENST00000338145 NUTM1Q86Y26 1132 aa13.32□□□□□ -0.28
UBE2D3-202ENST00000338145 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
UBE2D3-202ENST00000338145 EVC2Q86UK5 1308 aa13.32□□□□□ -0.28
UBE2D3-202ENST00000338145 PIK3C2AO00443 1686 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 ATP6V1AP38606 617 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 CEP350Q5VT06 3117 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
UBE2D3-202ENST00000338145 GOLGB1Q14789 3259 aaKnown RBP13.3□□□□□ -0.28
UBE2D3-202ENST00000338145 ITGBL1O95965 494 aaPredicted RBP13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 GJA5P36382 358 aa13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 FUT2Q10981 343 aa13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
UBE2D3-202ENST00000338145 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
UBE2D3-202ENST00000338145 RGPD5Q99666 1765 aa13.28□□□□□ -0.28
UBE2D3-202ENST00000338145 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
UBE2D3-202ENST00000338145 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
UBE2D3-202ENST00000338145 QSER1Q2KHR3 1735 aa13.27□□□□□ -0.28
UBE2D3-202ENST00000338145 HOXA2O43364 376 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 HMGB2P26583 209 aaKnown RBP13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 NLGN2Q8NFZ4 835 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 FAM117AQ9C073 453 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 NFAT5O94916 1531 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 COL24A1Q17RW2 1714 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 BTAF1O14981 1849 aa13.27□□□□□ -0.29
UBE2D3-202ENST00000338145 NR1I2O75469 434 aa13.26□□□□□ -0.29
UBE2D3-202ENST00000338145 MORN1Q5T089 497 aa13.26□□□□□ -0.29
UBE2D3-202ENST00000338145 TBC1D2Q9BYX2 928 aa13.26□□□□□ -0.29
UBE2D3-202ENST00000338145 IL21Q9HBE4 155 aa13.26□□□□□ -0.29
UBE2D3-202ENST00000338145 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.294e-8■□□□□ 8.6
UBE2D3-202ENST00000338145 HSPA6P17066 643 aa13.25□□□□□ -0.29
UBE2D3-202ENST00000338145 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
UBE2D3-202ENST00000338145 MTRQ99707 1265 aa13.25□□□□□ -0.29
UBE2D3-202ENST00000338145 ATP10DQ9P241 1426 aa13.24□□□□□ -0.29
UBE2D3-202ENST00000338145 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
UBE2D3-202ENST00000338145 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-202ENST00000338145 SALL2Q9Y467 1007 aaPredicted RBP13.24□□□□□ -0.29
UBE2D3-202ENST00000338145 ANKRD24Q8TF21 1146 aa13.23□□□□□ -0.29
UBE2D3-202ENST00000338145 GOPCQ9HD26 462 aa13.23□□□□□ -0.29
UBE2D3-202ENST00000338145 TUSC1Q2TAM9 212 aa13.22□□□□□ -0.29
UBE2D3-202ENST00000338145 SH3D19Q5HYK7 790 aa13.22□□□□□ -0.29
UBE2D3-202ENST00000338145 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
UBE2D3-202ENST00000338145 CD2APQ9Y5K6 639 aa13.22□□□□□ -0.29
UBE2D3-202ENST00000338145 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
UBE2D3-202ENST00000338145 DDX54Q8TDD1 881 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-202ENST00000338145 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 SPTLC1O15269 473 aa13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 KCNC4Q03721 635 aa13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 Q3C1V9 767 aa13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 MYSM1Q5VVJ2 828 aa13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 SYTL4Q96C24 671 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-202ENST00000338145 ZPR1O75312 459 aa13.19□□□□□ -0.3
UBE2D3-202ENST00000338145 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
UBE2D3-202ENST00000338145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
UBE2D3-202ENST00000338145 FLAD1Q8NFF5 587 aa13.19□□□□□ -0.3
UBE2D3-202ENST00000338145 MOXD2PA6NHM9 499 aa13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 COPS2P61201 443 aa13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 RSBN1LQ6PCB5 846 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
UBE2D3-202ENST00000338145 SLC27A5Q9Y2P5 690 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms