RNA–Protein interactions for RNA: ENST00000337004.8

PTDSS1-201, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 1 (best)

Gene PTDSS1, Length 2,366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-201ENST00000337004 IFIT2P09913 472 aaKnown RBP25.86■■□□□ 1.73
PTDSS1-201ENST00000337004 ZSCAN22P10073 491 aaPredicted RBP25.86■■□□□ 1.73
PTDSS1-201ENST00000337004 RUFY3Q7L099 469 aa25.86■■□□□ 1.73
PTDSS1-201ENST00000337004 PRKCSHP14314 528 aaPredicted RBP25.85■■□□□ 1.73
PTDSS1-201ENST00000337004 SMC3Q9UQE7 1217 aa25.85■■□□□ 1.73
PTDSS1-201ENST00000337004 LTN1O94822 1766 aa25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 STX6O43752 255 aa25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 GIGYF1O75420 1035 aaPredicted RBP25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 ZKSCAN5Q9Y2L8 839 aa25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 ATP6V1DQ9Y5K8 247 aa25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 CASTP20810 708 aaKnown RBP25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 KDM3BQ7LBC6 1761 aa25.84■■□□□ 1.73
PTDSS1-201ENST00000337004 RRP9O43818 475 aaKnown RBP25.83■■□□□ 1.73
PTDSS1-201ENST00000337004 FER1L4A9Z1Z3 1794 aa25.83■■□□□ 1.73
PTDSS1-201ENST00000337004 NCAPD2Q15021 1401 aa25.83■■□□□ 1.73
PTDSS1-201ENST00000337004 EVI5LQ96CN4 794 aa25.83■■□□□ 1.73
PTDSS1-201ENST00000337004 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.83■■□□□ 1.73
PTDSS1-201ENST00000337004 SYT1P21579 422 aa25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 ANKLE2Q86XL3 938 aa25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 HSP90AA2PQ14568 343 aaPredicted RBP25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 VPS53Q5VIR6 699 aa25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 FAM184AQ8NB25 1140 aa25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 HYPKQ9NX55 129 aa25.82■■□□□ 1.72
PTDSS1-201ENST00000337004 TERF1P54274 439 aa25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 ZSCAN31Q96LW9 406 aaPredicted RBP25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 TM6SF1Q9BZW5 370 aa25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 LETM1O95202 739 aaPredicted RBP25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 UBE2Q2Q8WVN8 375 aa25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 RBM33Q96EV2 1170 aaKnown RBP25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 PDRG1Q9NUG6 133 aa25.81■■□□□ 1.72
PTDSS1-201ENST00000337004 GCP02774 474 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 CCDC183Q5T5S1 534 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 LARP6Q9BRS8 491 aaKnown RBP25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 CNPY2Q9Y2B0 182 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 OVOS2A0A0G2JMS6 1433 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 PTH1RQ03431 593 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 PROSER3Q2NL68 480 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 KCNB2Q92953 911 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 JAKMIP1Q96N16 626 aaKnown RBP25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 PA2G4Q9UQ80 394 aaKnown RBP25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 CYP46A1Q9Y6A2 500 aa25.8■■□□□ 1.72
PTDSS1-201ENST00000337004 DDX58O95786 925 aaKnown RBP25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 F13A1P00488 732 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 UBE2HP62256 183 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 CWF19L2Q2TBE0 894 aaKnown RBP25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 PRPF40BQ6NWY9 871 aaKnown RBP25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 AACSQ86V21 672 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 ARHGEF25Q86VW2 580 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 LINS1Q8NG48 757 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 ZSWIM6Q9HCJ5 1215 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 SH2B1Q9NRF2 756 aaPredicted RBP25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 HEG1Q9ULI3 1381 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 LMO7Q8WWI1 1683 aa25.79■■□□□ 1.72
PTDSS1-201ENST00000337004 ZKSCAN1P17029 563 aaPredicted RBP25.78■■□□□ 1.72
PTDSS1-201ENST00000337004 HIP1O00291 1037 aa25.78■■□□□ 1.72
PTDSS1-201ENST00000337004 UVSSAQ2YD98 709 aa25.78■■□□□ 1.72
PTDSS1-201ENST00000337004 CPA1P15085 419 aa25.77■■□□□ 1.72
PTDSS1-201ENST00000337004 CSPP1Q1MSJ5 1256 aa25.77■■□□□ 1.72
PTDSS1-201ENST00000337004 GRM8O00222 908 aa25.77■■□□□ 1.72
PTDSS1-201ENST00000337004 G3BP1Q13283 466 aaKnown RBP eCLIP25.77■■□□□ 1.72
PTDSS1-201ENST00000337004 CRYBG1Q9Y4K1 1723 aa25.76■■□□□ 1.71
PTDSS1-201ENST00000337004 ANKRD24Q8TF21 1146 aa25.76■■□□□ 1.71
PTDSS1-201ENST00000337004 NECTIN1Q15223 517 aa25.76■■□□□ 1.71
PTDSS1-201ENST00000337004 ADCK5Q3MIX3 580 aa25.76■■□□□ 1.71
PTDSS1-201ENST00000337004 CCDC83Q8IWF9 413 aa25.76■■□□□ 1.71
PTDSS1-201ENST00000337004 PTMAP06454 111 aaKnown RBP25.75■■□□□ 1.71
PTDSS1-201ENST00000337004 UTYO14607 1347 aa25.75■■□□□ 1.71
PTDSS1-201ENST00000337004 GJB2P29033 226 aa25.75■■□□□ 1.71
PTDSS1-201ENST00000337004 XPCQ01831 940 aaPredicted RBP25.75■■□□□ 1.71
PTDSS1-201ENST00000337004 CCDC171Q6TFL3 1326 aa25.75■■□□□ 1.71
PTDSS1-201ENST00000337004 LARGE1O95461 756 aa25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 KLHL34Q8N239 644 aa25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 SUCLG2Q96I99 432 aa25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 DDX21Q9NR30 783 aaKnown RBP eCLIP25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 PRAMEF22A3QJZ6 481 aa25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 PXDNQ92626 1479 aa25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 PHRF1Q9P1Y6 1649 aaKnown RBP25.74■■□□□ 1.71
PTDSS1-201ENST00000337004 KCNJ4P48050 445 aa25.73■■□□□ 1.71
PTDSS1-201ENST00000337004 SASH1O94885 1247 aa25.72■■□□□ 1.71
PTDSS1-201ENST00000337004 BICC1Q9H694 974 aaKnown RBP25.72■■□□□ 1.71
PTDSS1-201ENST00000337004 FIBPO43427 364 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 PDIA4P13667 645 aaKnown RBP25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 PSMA5P28066 241 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 MAP4K1Q92918 833 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 EAF2Q96CJ1 260 aaPredicted RBP25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 R3HCC1Q9Y3T6 440 aaKnown RBP25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 RBM8AQ9Y5S9 174 aaKnown RBP25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 AIMP1Q12904 312 aaKnown RBP25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 CREB3L3Q68CJ9 461 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 KAZALD1Q96I82 304 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 MTMR6Q9Y217 621 aa25.71■■□□□ 1.71
PTDSS1-201ENST00000337004 LMOD2Q6P5Q4 547 aa25.7■■□□□ 1.71
PTDSS1-201ENST00000337004 NMIQ13287 307 aaPredicted RBP25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 RIC3Q7Z5B4 369 aa25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 CCDC8Q9H0W5 538 aaPredicted RBP25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 SNRKQ9NRH2 765 aa25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 CHD2O14647 1828 aaKnown RBP25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 ME3Q16798 604 aa25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 GLIPR1L2Q4G1C9 344 aa25.69■■□□□ 1.7
PTDSS1-201ENST00000337004 LARP1Q6PKG0 1096 aaKnown RBP25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms