RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 RPAP1Q9BWH6 1393 aaPredicted RBP21.47■■□□□ 1.03
IFFO1-201ENST00000336604 GIGYF1O75420 1035 aaPredicted RBP21.46■■□□□ 1.03
IFFO1-201ENST00000336604 R3HCC1Q9Y3T6 440 aaKnown RBP21.46■■□□□ 1.03
IFFO1-201ENST00000336604 TTC41PQ6P2S7 1318 aa21.46■■□□□ 1.03
IFFO1-201ENST00000336604 OFD1O75665 1012 aa21.46■■□□□ 1.03
IFFO1-201ENST00000336604 MTX1Q13505 466 aa21.46■■□□□ 1.03
IFFO1-201ENST00000336604 DIAPH3Q9NSV4 1193 aa21.46■■□□□ 1.03
IFFO1-201ENST00000336604 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
IFFO1-201ENST00000336604 DTNBO60941 627 aa21.45■■□□□ 1.02
IFFO1-201ENST00000336604 GCP02774 474 aa21.45■■□□□ 1.02
IFFO1-201ENST00000336604 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
IFFO1-201ENST00000336604 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
IFFO1-201ENST00000336604 PTH1RQ03431 593 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 TPRNQ4KMQ1 711 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 KSR2Q6VAB6 950 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 ORAI2Q96SN7 254 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 ECHDC1Q9NTX5 307 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 LIMCH1Q9UPQ0 1083 aa21.44■■□□□ 1.02
IFFO1-201ENST00000336604 HS1BP3Q53T59 392 aa21.43■■□□□ 1.02
IFFO1-201ENST00000336604 ANKLE2Q86XL3 938 aa21.43■■□□□ 1.02
IFFO1-201ENST00000336604 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.43■■□□□ 1.02
IFFO1-201ENST00000336604 ARHGEF25Q86VW2 580 aa21.43■■□□□ 1.02
IFFO1-201ENST00000336604 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.43■■□□□ 1.02
IFFO1-201ENST00000336604 NOL7Q9UMY1 257 aaKnown RBP21.43■■□□□ 1.02
IFFO1-201ENST00000336604 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
IFFO1-201ENST00000336604 LARGE1O95461 756 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 IFIT2P09913 472 aaKnown RBP21.42■■□□□ 1.02
IFFO1-201ENST00000336604 ADCK5Q3MIX3 580 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 ANKRD24Q8TF21 1146 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 CNPY2Q9Y2B0 182 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 LMO7Q8WWI1 1683 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 ALDH1L1O75891 902 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 SYT1P21579 422 aa21.42■■□□□ 1.02
IFFO1-201ENST00000336604 SYAP1Q96A49 352 aaPredicted RBP21.42■■□□□ 1.02
IFFO1-201ENST00000336604 AIMP1Q12904 312 aaKnown RBP21.41■■□□□ 1.02
IFFO1-201ENST00000336604 PRPF40BQ6NWY9 871 aaKnown RBP21.41■■□□□ 1.02
IFFO1-201ENST00000336604 AACSQ86V21 672 aa21.41■■□□□ 1.02
IFFO1-201ENST00000336604 TSPY26PQ9H489 355 aa21.41■■□□□ 1.02
IFFO1-201ENST00000336604 AXIN2Q9Y2T1 843 aa21.41■■□□□ 1.02
IFFO1-201ENST00000336604 ZSCAN22P10073 491 aaPredicted RBP21.41■■□□□ 1.02
IFFO1-201ENST00000336604 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
IFFO1-201ENST00000336604 STX6O43752 255 aa21.4■■□□□ 1.02
IFFO1-201ENST00000336604 DDX54Q8TDD1 881 aaKnown RBP21.4■■□□□ 1.02
IFFO1-201ENST00000336604 KAZALD1Q96I82 304 aa21.4■■□□□ 1.02
IFFO1-201ENST00000336604 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
IFFO1-201ENST00000336604 JAKMIP1Q96N16 626 aaKnown RBP21.4■■□□□ 1.02
IFFO1-201ENST00000336604 ADGRL3Q9HAR2 1447 aa21.4■■□□□ 1.02
IFFO1-201ENST00000336604 GPATCH3Q96I76 525 aa21.39■■□□□ 1.01
IFFO1-201ENST00000336604 SUCLG2Q96I99 432 aa21.39■■□□□ 1.01
IFFO1-201ENST00000336604 HEG1Q9ULI3 1381 aa21.39■■□□□ 1.01
IFFO1-201ENST00000336604 SMC3Q9UQE7 1217 aa21.39■■□□□ 1.01
IFFO1-201ENST00000336604 CRYBG1Q9Y4K1 1723 aa21.39■■□□□ 1.01
IFFO1-201ENST00000336604 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.39■■□□□ 1.01
IFFO1-201ENST00000336604 CHD2O14647 1828 aaKnown RBP21.39■■□□□ 1.01
IFFO1-201ENST00000336604 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.01
IFFO1-201ENST00000336604 TCHHQ07283 1943 aa21.38■■□□□ 1.01
IFFO1-201ENST00000336604 GRM8O00222 908 aa21.38■■□□□ 1.01
IFFO1-201ENST00000336604 CCDC83Q8IWF9 413 aa21.38■■□□□ 1.01
IFFO1-201ENST00000336604 SASH1O94885 1247 aa21.38■■□□□ 1.01
IFFO1-201ENST00000336604 ERC1Q8IUD2 1116 aa21.38■■□□□ 1.01
IFFO1-201ENST00000336604 LINS1Q8NG48 757 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 EAF2Q96CJ1 260 aaPredicted RBP21.37■■□□□ 1.01
IFFO1-201ENST00000336604 FAM227BQ96M60 508 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 TMEM87AQ8NBN3 555 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 EVI5LQ96CN4 794 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 CCDC8Q9H0W5 538 aaPredicted RBP21.37■■□□□ 1.01
IFFO1-201ENST00000336604 PDRG1Q9NUG6 133 aa21.37■■□□□ 1.01
IFFO1-201ENST00000336604 SIL1Q9H173 461 aa21.36■■□□□ 1.01
IFFO1-201ENST00000336604 ZKSCAN5Q9Y2L8 839 aa21.36■■□□□ 1.01
IFFO1-201ENST00000336604 PHF14O94880 888 aa21.36■■□□□ 1.01
IFFO1-201ENST00000336604 TLR7Q9NYK1 1049 aaKnown RBP21.36■■□□□ 1.01
IFFO1-201ENST00000336604 FIBPO43427 364 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 F13A1P00488 732 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 COL9A3Q14050 684 aaPredicted RBP21.35■■□□□ 1.01
IFFO1-201ENST00000336604 KLHDC4Q8TBB5 520 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 GJB2P29033 226 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 SLC39A6Q13433 755 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 VPS53Q5VIR6 699 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 ZSWIM6Q9HCJ5 1215 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 CYP46A1Q9Y6A2 500 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 PHRF1Q9P1Y6 1649 aaKnown RBP21.35■■□□□ 1.01
IFFO1-201ENST00000336604 CCDC171Q6TFL3 1326 aa21.35■■□□□ 1.01
IFFO1-201ENST00000336604 ZNF500O60304 480 aaPredicted RBP21.34■■□□□ 1.01
IFFO1-201ENST00000336604 PDIA6Q15084 440 aa21.34■■□□□ 1.01
IFFO1-201ENST00000336604 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
IFFO1-201ENST00000336604 UQCRHLA0A096LP55 91 aa21.34■■□□□ 1.01
IFFO1-201ENST00000336604 UQCRHP07919 91 aa21.34■■□□□ 1.01
IFFO1-201ENST00000336604 DDX21Q9NR30 783 aaKnown RBP eCLIP21.34■■□□□ 1.01
IFFO1-201ENST00000336604 IGKV5-2P06315 115 aa21.33■■□□□ 1.01
IFFO1-201ENST00000336604 G3BP1Q13283 466 aaKnown RBP eCLIP21.33■■□□□ 1.01
IFFO1-201ENST00000336604 HDAC5Q9UQL6 1122 aa21.33■■□□□ 1.01
IFFO1-201ENST00000336604 RBM8AQ9Y5S9 174 aaKnown RBP21.33■■□□□ 1.01
IFFO1-201ENST00000336604 DDX58O95786 925 aaKnown RBP21.33■■□□□ 1.01
IFFO1-201ENST00000336604 ST3GAL1Q11201 340 aa21.33■■□□□ 1.01
IFFO1-201ENST00000336604 NMIQ13287 307 aaPredicted RBP21.33■■□□□ 1.01
IFFO1-201ENST00000336604 MYL6BP14649 208 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 KCNJ4P48050 445 aa21.32■■□□□ 1
IFFO1-201ENST00000336604 ME3Q16798 604 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms