RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 HCLS1P14317 486 aaPredicted RBP18.38■□□□□ 0.53
HDAC5-202ENST00000336057 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
HDAC5-202ENST00000336057 TMOD3Q9NYL9 352 aa18.38■□□□□ 0.53
HDAC5-202ENST00000336057 GOLIM4O00461 696 aa18.37■□□□□ 0.53
HDAC5-202ENST00000336057 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
HDAC5-202ENST00000336057 IKQ13123 557 aaPredicted RBP18.37■□□□□ 0.53
HDAC5-202ENST00000336057 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
HDAC5-202ENST00000336057 FSIP1Q8NA03 581 aa18.37■□□□□ 0.53
HDAC5-202ENST00000336057 NAPBQ9H115 298 aa18.37■□□□□ 0.53
HDAC5-202ENST00000336057 ABCF2Q9UG63 623 aa18.37■□□□□ 0.53
HDAC5-202ENST00000336057 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
HDAC5-202ENST00000336057 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 ALDH1L1O75891 902 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 ZNF165P49910 485 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 ANKRD24Q8TF21 1146 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 TRIM35Q9UPQ4 493 aa18.36■□□□□ 0.53
HDAC5-202ENST00000336057 YTHDC2Q9H6S0 1430 aaKnown RBP18.36■□□□□ 0.53
HDAC5-202ENST00000336057 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 KIF18AQ8NI77 898 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 UBXN4Q92575 508 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 USP26Q9BXU7 913 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 FLT4P35916 1363 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
HDAC5-202ENST00000336057 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 NECAB1Q8N987 351 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 ERLIN1O75477 346 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 CAVIN2O95810 425 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 SOGA3Q5TF21 947 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 GIMAP6Q6P9H5 292 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
HDAC5-202ENST00000336057 NEMFO60524 1076 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 ADGBQ8N7X0 1667 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 RBM8AQ9Y5S9 174 aaKnown RBP18.34■□□□□ 0.53
HDAC5-202ENST00000336057 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 KRT28Q7Z3Y7 464 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 KRT18P05783 430 aaKnown RBP18.34■□□□□ 0.53
HDAC5-202ENST00000336057 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
HDAC5-202ENST00000336057 STX1AQ16623 288 aa18.34■□□□□ 0.53
HDAC5-202ENST00000336057 MAP3K12Q12852 859 aa18.33■□□□□ 0.53
HDAC5-202ENST00000336057 PDCL3Q9H2J4 239 aa18.33■□□□□ 0.53
HDAC5-202ENST00000336057 KSR2Q6VAB6 950 aa18.33■□□□□ 0.53
HDAC5-202ENST00000336057 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.53
HDAC5-202ENST00000336057 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.53
HDAC5-202ENST00000336057 TNNT1P13805 278 aa18.33■□□□□ 0.52
HDAC5-202ENST00000336057 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
HDAC5-202ENST00000336057 PTPRTO14522 1441 aa18.33■□□□□ 0.52
HDAC5-202ENST00000336057 CT47A1Q5JQC4 288 aaPredicted RBP18.32■□□□□ 0.52
HDAC5-202ENST00000336057 GRM8O00222 908 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 ZSCAN12O43309 604 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
HDAC5-202ENST00000336057 HSP90AB3PQ58FF7 597 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 C16orf45Q96MC5 204 aaPredicted RBP18.32■□□□□ 0.52
HDAC5-202ENST00000336057 DEF6Q9H4E7 631 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
HDAC5-202ENST00000336057 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 LEKR1Q6ZMV7 388 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 BRF1Q92994 677 aa18.32■□□□□ 0.52
HDAC5-202ENST00000336057 MINDY4BA8MYZ0 360 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 F13A1P00488 732 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 USP16Q9Y5T5 823 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 ARHGAP29Q52LW3 1261 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 AKAP4Q5JQC9 854 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
HDAC5-202ENST00000336057 LUC7LQ9NQ29 371 aaKnown RBP18.31■□□□□ 0.52
HDAC5-202ENST00000336057 TTC41PQ6P2S7 1318 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 CHMLP26374 656 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
HDAC5-202ENST00000336057 TOP1P11387 765 aaKnown RBP18.31■□□□□ 0.52
HDAC5-202ENST00000336057 DDX46Q7L014 1031 aaKnown RBP18.31■□□□□ 0.52
HDAC5-202ENST00000336057 SNRKQ9NRH2 765 aa18.31■□□□□ 0.52
HDAC5-202ENST00000336057 JARID2Q92833 1246 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-202ENST00000336057 IL13P35225 146 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 GSDMDP57764 484 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 EYA1Q99502 592 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 ORC3Q9UBD5 711 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-202ENST00000336057 KDM6BO15054 1643 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 MSH6P52701 1360 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-202ENST00000336057 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
HDAC5-202ENST00000336057 ATP7AQ04656 1500 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 GOLGA8AA7E2F4 631 aa18.3■□□□□ 0.52
HDAC5-202ENST00000336057 EIF3JO75822 258 aaKnown RBP18.3■□□□□ 0.52
HDAC5-202ENST00000336057 IFIT3O14879 490 aaKnown RBP18.29■□□□□ 0.52
HDAC5-202ENST00000336057 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 XAGE3Q8WTP9 111 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 CCDC82Q8N4S0 544 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 CNNM3Q8NE01 707 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 TXLNBQ8N3L3 684 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 TANGO6Q9C0B7 1094 aa18.29■□□□□ 0.52
HDAC5-202ENST00000336057 SLC5A1P13866 664 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 HAND2P61296 217 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 COPS6Q7L5N1 327 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 PRIMPOLQ96LW4 560 aa18.28■□□□□ 0.52
HDAC5-202ENST00000336057 SSRP1Q08945 709 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms