RNA–Protein interactions for RNA: ENST00000334557.10

FMR1-202, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-202ENST00000334557 CNKSR1Q969H4 720 aa27.05■■□□□ 1.92
FMR1-202ENST00000334557 FMNL2Q96PY5 1086 aa27.05■■□□□ 1.92
FMR1-202ENST00000334557 CREBZFQ9NS37 354 aa27.05■■□□□ 1.92
FMR1-202ENST00000334557 USP16Q9Y5T5 823 aa27.05■■□□□ 1.92
FMR1-202ENST00000334557 PRAMEF22A3QJZ6 481 aa27.04■■□□□ 1.92
FMR1-202ENST00000334557 GAS2L2Q8NHY3 880 aa27.04■■□□□ 1.92
FMR1-202ENST00000334557 PHACTR3Q96KR7 559 aa27.04■■□□□ 1.92
FMR1-202ENST00000334557 NPHP1O15259 732 aa27.03■■□□□ 1.92
FMR1-202ENST00000334557 DZIP3Q86Y13 1208 aaKnown RBP27.03■■□□□ 1.92
FMR1-202ENST00000334557 C7orf43Q8WVR3 580 aa27.02■■□□□ 1.92
FMR1-202ENST00000334557 MASTLQ96GX5 879 aa27.02■■□□□ 1.92
FMR1-202ENST00000334557 CACNA1SQ13698 1873 aa27.02■■□□□ 1.92
FMR1-202ENST00000334557 CEMIPQ8WUJ3 1361 aa27.01■■□□□ 1.91
FMR1-202ENST00000334557 ST5P78524 1137 aa27.01■■□□□ 1.91
FMR1-202ENST00000334557 BTBD11A6QL63 1104 aa27■■□□□ 1.91
FMR1-202ENST00000334557 OLFM4Q6UX06 510 aa27■■□□□ 1.91
FMR1-202ENST00000334557 PASKQ96RG2 1323 aa26.98■■□□□ 1.91
FMR1-202ENST00000334557 NPM2Q86SE8 214 aaKnown RBP26.98■■□□□ 1.91
FMR1-202ENST00000334557 CCER1Q8TC90 406 aaPredicted RBP26.98■■□□□ 1.91
FMR1-202ENST00000334557 TAF1DQ9H5J8 278 aaPredicted RBP26.98■■□□□ 1.91
FMR1-202ENST00000334557 FOXN1O15353 648 aa26.97■■□□□ 1.91
FMR1-202ENST00000334557 BCORQ6W2J9 1755 aa26.97■■□□□ 1.91
FMR1-202ENST00000334557 NBPF5PQ86XG9 351 aaPredicted RBP26.96■■□□□ 1.91
FMR1-202ENST00000334557 CNTNAP1P78357 1384 aa26.96■■□□□ 1.91
FMR1-202ENST00000334557 PRKAR2BP31323 418 aa26.95■■□□□ 1.9
FMR1-202ENST00000334557 SOGA3Q5TF21 947 aa26.95■■□□□ 1.9
FMR1-202ENST00000334557 L3MBTL3Q96JM7 780 aaPredicted RBP26.95■■□□□ 1.9
FMR1-202ENST00000334557 ZNF277Q9NRM2 450 aaPredicted RBP26.95■■□□□ 1.9
FMR1-202ENST00000334557 ARFGEF2Q9Y6D5 1785 aa26.94■■□□□ 1.9
FMR1-202ENST00000334557 ZNF541Q9H0D2 1346 aa26.94■■□□□ 1.9
FMR1-202ENST00000334557 ITGBL1O95965 494 aaPredicted RBP26.94■■□□□ 1.9
FMR1-202ENST00000334557 LDHDQ86WU2 507 aa26.94■■□□□ 1.9
FMR1-202ENST00000334557 RSPH6AQ9H0K4 717 aa26.94■■□□□ 1.9
FMR1-202ENST00000334557 KLRG2A4D1S0 409 aaPredicted RBP26.93■■□□□ 1.9
FMR1-202ENST00000334557 IQCA1LA6NCM1 817 aa26.93■■□□□ 1.9
FMR1-202ENST00000334557 NBPF26B4DH59 902 aa26.93■■□□□ 1.9
FMR1-202ENST00000334557 CCDC93Q567U6 631 aa26.93■■□□□ 1.9
FMR1-202ENST00000334557 NBPF10Q6P3W6 841 aaKnown RBP26.93■■□□□ 1.9
FMR1-202ENST00000334557 CLEC4GQ6UXB4 293 aa26.93■■□□□ 1.9
FMR1-202ENST00000334557 NBPF15Q8N660 670 aa26.93■■□□□ 1.9
FMR1-202ENST00000334557 FAM177BA6PVY3 158 aa26.92■■□□□ 1.9
FMR1-202ENST00000334557 NPR1P16066 1061 aa26.92■■□□□ 1.9
FMR1-202ENST00000334557 VEGFBP49765 207 aa26.92■■□□□ 1.9
FMR1-202ENST00000334557 FKBP4Q02790 459 aaKnown RBP eCLIP26.91■■□□□ 1.9
FMR1-202ENST00000334557 EAPPQ56P03 285 aaPredicted RBP26.91■■□□□ 1.9
FMR1-202ENST00000334557 MCM10Q7L590 875 aa26.91■■□□□ 1.9
FMR1-202ENST00000334557 NPC1L1Q9UHC9 1359 aa26.9■■□□□ 1.9
FMR1-202ENST00000334557 SNRPA1P09661 255 aaKnown RBP26.89■■□□□ 1.9
FMR1-202ENST00000334557 DCTN1Q14203 1278 aa26.89■■□□□ 1.9
FMR1-202ENST00000334557 NIP7Q9Y221 180 aaKnown RBP eCLIP26.89■■□□□ 1.9
FMR1-202ENST00000334557 SCN4AP35499 1836 aa26.88■■□□□ 1.89
FMR1-202ENST00000334557 TMEM88BA6NKF7 163 aa26.88■■□□□ 1.89
FMR1-202ENST00000334557 HLFQ16534 295 aa26.88■■□□□ 1.89
FMR1-202ENST00000334557 TPTE2Q6XPS3 522 aa26.88■■□□□ 1.89
FMR1-202ENST00000334557 HACL1Q9UJ83 578 aa26.87■■□□□ 1.89
FMR1-202ENST00000334557 CLEC11AQ9Y240 323 aa26.87■■□□□ 1.89
FMR1-202ENST00000334557 ZNF652Q9Y2D9 606 aa26.87■■□□□ 1.89
FMR1-202ENST00000334557 EPHX2P34913 555 aa26.85■■□□□ 1.89
FMR1-202ENST00000334557 MAP1SQ66K74 1059 aaPredicted RBP26.85■■□□□ 1.89
FMR1-202ENST00000334557 SYNE4Q8N205 404 aa26.85■■□□□ 1.89
FMR1-202ENST00000334557 PRDM10Q9NQV6 1147 aa26.85■■□□□ 1.89
FMR1-202ENST00000334557 RNF123Q5XPI4 1314 aa26.85■■□□□ 1.89
FMR1-202ENST00000334557 FZD9O00144 591 aa26.84■■□□□ 1.89
FMR1-202ENST00000334557 RTKN2Q8IZC4 609 aa26.84■■□□□ 1.89
FMR1-202ENST00000334557 IARSP41252 1262 aaKnown RBP26.83■■□□□ 1.89
FMR1-202ENST00000334557 MIS18AQ9NYP9 233 aa26.83■■□□□ 1.89
FMR1-202ENST00000334557 ADAMTSL1Q8N6G6 1762 aa26.83■■□□□ 1.89
FMR1-202ENST00000334557 CNTROBQ8N137 903 aa26.82■■□□□ 1.88
FMR1-202ENST00000334557 WBP1LQ9NX94 342 aa26.82■■□□□ 1.88
FMR1-202ENST00000334557 CTCFP49711 727 aaPredicted RBP26.81■■□□□ 1.88
FMR1-202ENST00000334557 LBX1P52954 281 aa26.81■■□□□ 1.88
FMR1-202ENST00000334557 SLC51AQ86UW1 340 aa26.81■■□□□ 1.88
FMR1-202ENST00000334557 RTF1Q92541 710 aaKnown RBP26.81■■□□□ 1.88
FMR1-202ENST00000334557 U2AF1L5P0DN76 240 aaPredicted RBP26.8■■□□□ 1.88
FMR1-202ENST00000334557 U2AF1Q01081 240 aaKnown RBP eCLIP26.8■■□□□ 1.88
FMR1-202ENST00000334557 SNED1Q8TER0 1413 aa26.8■■□□□ 1.88
FMR1-202ENST00000334557 ALDH1B1P30837 517 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 NUTM1Q86Y26 1132 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 NGEFQ8N5V2 710 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 AIDAQ96BJ3 306 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 CFAP53Q96M91 514 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 COL4A5P29400 1685 aa26.79■■□□□ 1.88
FMR1-202ENST00000334557 RASSF10A6NK89 507 aa26.78■■□□□ 1.88
FMR1-202ENST00000334557 FMR1Q06787 632 aaKnown RBP eCLIP26.78■■□□□ 1.88
FMR1-202ENST00000334557 DEFB115Q30KQ5 88 aa26.78■■□□□ 1.88
FMR1-202ENST00000334557 ABCC12Q96J65 1359 aa26.78■■□□□ 1.88
FMR1-202ENST00000334557 RGL2O15211 777 aa26.77■■□□□ 1.88
FMR1-202ENST00000334557 GTF2E1P29083 439 aaPredicted RBP26.77■■□□□ 1.88
FMR1-202ENST00000334557 PNMA8AQ86V59 439 aaPredicted RBP26.77■■□□□ 1.88
FMR1-202ENST00000334557 GPC2Q8N158 579 aa26.77■■□□□ 1.88
FMR1-202ENST00000334557 CRY2Q49AN0 593 aa26.76■■□□□ 1.87
FMR1-202ENST00000334557 NUDCQ9Y266 331 aa26.76■■□□□ 1.87
FMR1-202ENST00000334557 TAF7Q15545 349 aaPredicted RBP26.75■■□□□ 1.87
FMR1-202ENST00000334557 PSMD1Q99460 953 aa26.75■■□□□ 1.87
FMR1-202ENST00000334557 GJA3Q9Y6H8 435 aa26.75■■□□□ 1.87
FMR1-202ENST00000334557 PPP2R1AP30153 589 aa26.74■■□□□ 1.87
FMR1-202ENST00000334557 LTBP1Q14766 1721 aa26.73■■□□□ 1.87
FMR1-202ENST00000334557 WDR33Q9C0J8 1336 aaKnown RBP26.73■■□□□ 1.87
FMR1-202ENST00000334557 HSPA8P11142 646 aaKnown RBP26.73■■□□□ 1.87
FMR1-202ENST00000334557 TTLL7Q6ZT98 887 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms