RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 KIF4AO95239 1232 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 SKILP12757 684 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 SLMAPQ14BN4 828 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 PIBF1Q8WXW3 757 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 VEZTQ9HBM0 779 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC65Q8IXS2 484 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC155Q8N6L0 562 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 COG3Q96JB2 828 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 NUP88Q99567 741 aaPredicted RBP11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 FGFR1OPO95684 399 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 TRIM7Q9C029 511 aa11.84□□□□□ -0.51
SPTBN1-201ENST00000333896 ZNF500O60304 480 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 RFC1P35251 1148 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 GNAI1P63096 354 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 MAP7D1Q3KQU3 841 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 PHLDB2Q86SQ0 1253 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 SAMD15Q9P1V8 674 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 FAM200AQ8TCP9 573 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 SSX2IPQ9Y2D8 614 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 AEBP2Q6ZN18 517 aaPredicted RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 RIPK4P57078 832 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 IFI16Q16666 785 aaKnown RBP11.83□□□□□ -0.52
SPTBN1-201ENST00000333896 YEATS4O95619 227 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 PCK1P35558 622 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 SNX21Q969T3 373 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 MAP3K7CLP57077 242 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 FKBP15Q5T1M5 1219 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 RAD50Q92878 1312 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 SEPT10Q9P0V9 454 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 NEDD9Q14511 834 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 ZNF76P36508 570 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 CCDC129Q6ZRS4 1044 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 CNPY4Q8N129 248 aa11.82□□□□□ -0.52
SPTBN1-201ENST00000333896 CCDC110Q8TBZ0 833 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 CTAGE1Q96RT6 745 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 LARSQ9P2J5 1176 aaKnown RBP11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 ST20-MTHFSA0A0A6YYL1 179 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 FAM114A2Q9NRY5 505 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 MX1P20591 662 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 SATB1Q01826 763 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 STMN2Q93045 179 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 THEGQ9P2T0 379 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 ZNF165P49910 485 aa11.81□□□□□ -0.52
SPTBN1-201ENST00000333896 APAF1O14727 1248 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 CCDC12Q8WUD4 166 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 SMC6Q96SB8 1091 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 PYM1Q9BRP8 204 aaKnown RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 EPSTI1Q96J88 318 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 RBM26Q5T8P6 1007 aaKnown RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 TSPYL4Q9UJ04 414 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 GNG11P61952 73 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 LRRC23Q53EV4 343 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 ATRIPQ8WXE1 791 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 ZBTB16Q05516 673 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 CPLX4Q7Z7G2 160 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 JADE2Q9NQC1 790 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 SETDB1Q15047 1291 aa11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 RRAGDQ9NQL2 400 aaPredicted RBP11.8□□□□□ -0.52
SPTBN1-201ENST00000333896 GNAI3P08754 354 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 RASSF2P50749 326 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 DDX27Q96GQ7 796 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 IQCGQ9H095 443 aaKnown RBP11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 WASF1Q92558 559 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 MED4Q9NPJ6 270 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 TSG101Q99816 390 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 PANK2Q9BZ23 570 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 VCX3AQ9NNX9 186 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 PPFIA1Q13136 1202 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 ODF2LQ9ULJ1 636 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 CROCCP2Q86T23 111 aa11.79□□□□□ -0.52
SPTBN1-201ENST00000333896 MAP4K4O95819 1239 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 ATP5DP30049 168 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 IRX4P78413 519 aa11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 RAB3IPQ96QF0 476 aaPredicted RBP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPTBN1-201ENST00000333896 ALDH3A1P30838 453 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms