RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 ARHGAP45Q92619 1136 aa13.25□□□□□ -0.29
CCDC87-201ENST00000333861 SMC3Q9UQE7 1217 aa13.25□□□□□ -0.29
CCDC87-201ENST00000333861 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 ELF2Q15723 593 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 TAF3Q5VWG9 929 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 TRIM5Q9C035 493 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 TAF6LQ9Y6J9 622 aa13.24□□□□□ -0.29
CCDC87-201ENST00000333861 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 ZSCAN22P10073 491 aaPredicted RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 CUL4AQ13619 759 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 CCDC144BQ3MJ40 725 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 LTV1Q96GA3 475 aaPredicted RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 LRRCC1Q9C099 1032 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 MCCP23508 829 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 ANO6Q4KMQ2 910 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 PRPF40BQ6NWY9 871 aaKnown RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 FBXO38Q6PIJ6 1188 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 SNX14Q9Y5W7 946 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 WDR33Q9C0J8 1336 aaKnown RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 CHGBP05060 677 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 PTH1RQ03431 593 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 GABPB1Q06547 395 aaPredicted RBP13.23□□□□□ -0.29
CCDC87-201ENST00000333861 LRRN4CLQ8ND94 238 aa13.23□□□□□ -0.29
CCDC87-201ENST00000333861 SURF6O75683 361 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 GORABQ5T7V8 394 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 KRT222Q8N1A0 295 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 TSPYL4Q9UJ04 414 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 FAM135BQ49AJ0 1406 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 F13A1P00488 732 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 RBM6P78332 1123 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 JAKMIP1Q96N16 626 aaKnown RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 FUCA2Q9BTY2 467 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 NDUFB9Q9Y6M9 179 aa13.22□□□□□ -0.29
CCDC87-201ENST00000333861 MORC2Q9Y6X9 1032 aaPredicted RBP13.22□□□□□ -0.29
CCDC87-201ENST00000333861 NSD2O96028 1365 aa13.21□□□□□ -0.29
CCDC87-201ENST00000333861 HNRNPH2P55795 449 aaKnown RBP13.21□□□□□ -0.29
CCDC87-201ENST00000333861 CDC37L1Q7L3B6 337 aa13.21□□□□□ -0.29
CCDC87-201ENST00000333861 C14orf37Q86TY3 774 aa13.21□□□□□ -0.29
CCDC87-201ENST00000333861 FTOQ9C0B1 505 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC87-201ENST00000333861 CCDC66A2RUB6 948 aa13.21□□□□□ -0.3
CCDC87-201ENST00000333861 SMTNL1A8MU46 457 aa13.21□□□□□ -0.3
CCDC87-201ENST00000333861 POLR3GO15318 223 aaPredicted RBP13.21□□□□□ -0.3
CCDC87-201ENST00000333861 UBE2HP62256 183 aa13.21□□□□□ -0.3
CCDC87-201ENST00000333861 TTC6Q86TZ1 520 aa13.21□□□□□ -0.3
CCDC87-201ENST00000333861 NUDT16Q96DE0 195 aaKnown RBP13.21□□□□□ -0.3
CCDC87-201ENST00000333861 PUS7Q96PZ0 661 aaKnown RBP13.21□□□□□ -0.3
CCDC87-201ENST00000333861 PHAXQ9H814 394 aaKnown RBP13.21□□□□□ -0.3
CCDC87-201ENST00000333861 GOLGA6L6A8MZA4 724 aa13.2□□□□□ -0.3
CCDC87-201ENST00000333861 DACT1Q9NYF0 836 aa13.2□□□□□ -0.3
CCDC87-201ENST00000333861 ZSCAN25Q6NSZ9 544 aa13.2□□□□□ -0.3
CCDC87-201ENST00000333861 NEK11Q8NG66 645 aa13.2□□□□□ -0.3
CCDC87-201ENST00000333861 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 LRRC2Q9BYS8 371 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 RGS12O14924 1447 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 CD163L1Q9NR16 1453 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 GNAI2P04899 355 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 ST3GAL1Q11201 340 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 EIF4A2Q14240 407 aaKnown RBP13.19□□□□□ -0.3
CCDC87-201ENST00000333861 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
CCDC87-201ENST00000333861 ZNF446Q9NWS9 450 aa13.18□□□□□ -0.3
CCDC87-201ENST00000333861 PA2G4Q9UQ80 394 aaKnown RBP13.18□□□□□ -0.3
CCDC87-201ENST00000333861 HMMRO75330 724 aa13.18□□□□□ -0.3
CCDC87-201ENST00000333861 TYRO3Q06418 890 aa13.18□□□□□ -0.3
CCDC87-201ENST00000333861 ME3Q16798 604 aa13.18□□□□□ -0.3
CCDC87-201ENST00000333861 MTMR6Q9Y217 621 aa13.18□□□□□ -0.3
CCDC87-201ENST00000333861 NPHP4O75161 1426 aaPredicted RBP13.17□□□□□ -0.3
CCDC87-201ENST00000333861 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 OS9Q13438 667 aaPredicted RBP13.17□□□□□ -0.3
CCDC87-201ENST00000333861 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
CCDC87-201ENST00000333861 DLC1Q96QB1 1528 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 PRR36Q9H6K5 1346 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 USHBP1Q8N6Y0 703 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 COG3Q96JB2 828 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
CCDC87-201ENST00000333861 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
CCDC87-201ENST00000333861 NR1I2O75469 434 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 TAF7LQ5H9L4 462 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 EDC3Q96F86 508 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 CLIP2Q9UDT6 1046 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 USP32Q8NFA0 1604 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 TECPR2O15040 1411 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 BRPF1P55201 1214 aaPredicted RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
CCDC87-201ENST00000333861 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
CCDC87-201ENST00000333861 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms