RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PDIA6Q15084 440 aa26.38■■□□□ 1.81
MRPL40-201ENST00000333130 CLEC4GQ6UXB4 293 aa26.38■■□□□ 1.81
MRPL40-201ENST00000333130 NUP98P52948 1817 aa26.38■■□□□ 1.81
MRPL40-201ENST00000333130 MAP3K15Q6ZN16 1313 aa26.37■■□□□ 1.81
MRPL40-201ENST00000333130 ERVV-1B6SEH8 477 aa26.35■■□□□ 1.81
MRPL40-201ENST00000333130 ANXA1P04083 346 aa26.35■■□□□ 1.81
MRPL40-201ENST00000333130 PROSER3Q2NL68 480 aa26.35■■□□□ 1.81
MRPL40-201ENST00000333130 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
MRPL40-201ENST00000333130 YTHDC1Q96MU7 727 aaKnown RBP26.34■■□□□ 1.81
MRPL40-201ENST00000333130 BCL2L12Q9HB09 334 aa26.34■■□□□ 1.81
MRPL40-201ENST00000333130 VAMP4O75379 141 aa26.33■■□□□ 1.81
MRPL40-201ENST00000333130 AIMP1Q12904 312 aaKnown RBP26.33■■□□□ 1.81
MRPL40-201ENST00000333130 TTLL7Q6ZT98 887 aa26.33■■□□□ 1.81
MRPL40-201ENST00000333130 XAGE3Q8WTP9 111 aa26.33■■□□□ 1.81
MRPL40-201ENST00000333130 CARMIL3Q8ND23 1372 aa26.33■■□□□ 1.81
MRPL40-201ENST00000333130 AFDNP55196 1824 aaKnown RBP26.33■■□□□ 1.81
MRPL40-201ENST00000333130 NFIXQ14938 502 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 BICDL1Q6ZP65 573 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 COPS6Q7L5N1 327 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 LRP10Q7Z4F1 713 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 SETDB2Q96T68 719 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 ZBTB3Q9H5J0 574 aa26.33■■□□□ 1.8
MRPL40-201ENST00000333130 ANKRD36CQ5JPF3 1778 aa26.32■■□□□ 1.8
MRPL40-201ENST00000333130 TM4SF1P30408 202 aa26.32■■□□□ 1.8
MRPL40-201ENST00000333130 TBC1D9BQ66K14 1250 aa26.31■■□□□ 1.8
MRPL40-201ENST00000333130 FHDC1Q9C0D6 1143 aaPredicted RBP26.31■■□□□ 1.8
MRPL40-201ENST00000333130 POLRMTO00411 1230 aaKnown RBP26.3■■□□□ 1.8
MRPL40-201ENST00000333130 NPHP1O15259 732 aa26.3■■□□□ 1.8
MRPL40-201ENST00000333130 DDX58O95786 925 aaKnown RBP26.3■■□□□ 1.8
MRPL40-201ENST00000333130 KIF13BQ9NQT8 1826 aa26.29■■□□□ 1.8
MRPL40-201ENST00000333130 CT47B1P0C2W7 299 aaPredicted RBP26.29■■□□□ 1.8
MRPL40-201ENST00000333130 DDR1Q08345 913 aa26.29■■□□□ 1.8
MRPL40-201ENST00000333130 HSP90AB3PQ58FF7 597 aa26.29■■□□□ 1.8
MRPL40-201ENST00000333130 CD2APQ9Y5K6 639 aa26.29■■□□□ 1.8
MRPL40-201ENST00000333130 NRXN2Q9P2S2 1712 aa26.28■■□□□ 1.8
MRPL40-201ENST00000333130 ATP10DQ9P241 1426 aa26.28■■□□□ 1.8
MRPL40-201ENST00000333130 ARFGEF2Q9Y6D5 1785 aa26.28■■□□□ 1.8
MRPL40-201ENST00000333130 GIGYF2Q6Y7W6 1299 aaKnown RBP26.28■■□□□ 1.8
MRPL40-201ENST00000333130 NIP7Q9Y221 180 aaKnown RBP eCLIP26.28■■□□□ 1.8
MRPL40-201ENST00000333130 HLFQ16534 295 aa26.27■■□□□ 1.8
MRPL40-201ENST00000333130 PLBD2Q8NHP8 589 aa26.27■■□□□ 1.8
MRPL40-201ENST00000333130 ZNF428Q96B54 188 aa26.27■■□□□ 1.8
MRPL40-201ENST00000333130 SLC4A2P04920 1241 aa26.26■■□□□ 1.79
MRPL40-201ENST00000333130 SERPINB2P05120 415 aa26.26■■□□□ 1.79
MRPL40-201ENST00000333130 ANKRD13DQ6ZTN6 518 aa26.26■■□□□ 1.79
MRPL40-201ENST00000333130 SYT17Q9BSW7 474 aa26.25■■□□□ 1.79
MRPL40-201ENST00000333130 C10orf71Q711Q0 1435 aa26.25■■□□□ 1.79
MRPL40-201ENST00000333130 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
MRPL40-201ENST00000333130 RIC3Q7Z5B4 369 aa26.24■■□□□ 1.79
MRPL40-201ENST00000333130 NBPF5PQ86XG9 351 aaPredicted RBP26.24■■□□□ 1.79
MRPL40-201ENST00000333130 PHAXQ9H814 394 aaKnown RBP26.24■■□□□ 1.79
MRPL40-201ENST00000333130 CNBD1Q8NA66 436 aa26.23■■□□□ 1.79
MRPL40-201ENST00000333130 ST5P78524 1137 aa26.22■■□□□ 1.79
MRPL40-201ENST00000333130 PARP10Q53GL7 1025 aa26.22■■□□□ 1.79
MRPL40-201ENST00000333130 NYXQ9GZU5 481 aa26.22■■□□□ 1.79
MRPL40-201ENST00000333130 GPTP24298 496 aa26.2■■□□□ 1.79
MRPL40-201ENST00000333130 GTF2E1P29083 439 aaPredicted RBP26.2■■□□□ 1.79
MRPL40-201ENST00000333130 TPTE2Q6XPS3 522 aa26.2■■□□□ 1.79
MRPL40-201ENST00000333130 IBTKQ9P2D0 1353 aaPredicted RBP26.2■■□□□ 1.78
MRPL40-201ENST00000333130 DCAF8L1A6NGE4 600 aa26.2■■□□□ 1.78
MRPL40-201ENST00000333130 FLIIQ13045 1269 aa26.2■■□□□ 1.78
MRPL40-201ENST00000333130 PPP1R42Q7Z4L9 355 aa26.2■■□□□ 1.78
MRPL40-201ENST00000333130 TGFB2P61812 414 aa26.19■■□□□ 1.78
MRPL40-201ENST00000333130 FKBP5Q13451 457 aaPredicted RBP26.19■■□□□ 1.78
MRPL40-201ENST00000333130 TCIRG1Q13488 830 aa26.19■■□□□ 1.78
MRPL40-201ENST00000333130 ALDH1L2Q3SY69 923 aa26.19■■□□□ 1.78
MRPL40-201ENST00000333130 ZNF34Q8IZ26 560 aa26.19■■□□□ 1.78
MRPL40-201ENST00000333130 N4BP2Q86UW6 1770 aaPredicted RBP26.17■■□□□ 1.78
MRPL40-201ENST00000333130 FAM177BA6PVY3 158 aa26.17■■□□□ 1.78
MRPL40-201ENST00000333130 PRR5LQ6MZQ0 368 aa26.17■■□□□ 1.78
MRPL40-201ENST00000333130 KSR2Q6VAB6 950 aa26.17■■□□□ 1.78
MRPL40-201ENST00000333130 NEXNQ0ZGT2 675 aa26.16■■□□□ 1.78
MRPL40-201ENST00000333130 SSH1Q8WYL5 1049 aa26.16■■□□□ 1.78
MRPL40-201ENST00000333130 RNF123Q5XPI4 1314 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 UBN2Q6ZU65 1347 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 RARSP54136 660 aaKnown RBP26.15■■□□□ 1.78
MRPL40-201ENST00000333130 NLGN2Q8NFZ4 835 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 PDZRN3Q9UPQ7 1066 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 MAP3K2Q9Y2U5 619 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 ANKRD31Q8N7Z5 1873 aa26.15■■□□□ 1.78
MRPL40-201ENST00000333130 PI4KAP2A4QPH2 592 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 PDE6BP35913 854 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 G2E3Q7L622 706 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 MRPL50Q8N5N7 158 aaKnown RBP26.14■■□□□ 1.78
MRPL40-201ENST00000333130 PI4KAP1Q8N8J0 262 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 BRIP1Q9BX63 1249 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 SMC4Q9NTJ3 1288 aa26.14■■□□□ 1.78
MRPL40-201ENST00000333130 KIAA1551Q9HCM1 1747 aa26.13■■□□□ 1.77
MRPL40-201ENST00000333130 BRPF1P55201 1214 aaPredicted RBP26.13■■□□□ 1.77
MRPL40-201ENST00000333130 METTL22Q9BUU2 404 aaPredicted RBP26.13■■□□□ 1.77
MRPL40-201ENST00000333130 UTP14AQ9BVJ6 771 aaKnown RBP26.13■■□□□ 1.77
MRPL40-201ENST00000333130 PXDNLA1KZ92 1463 aa26.13■■□□□ 1.77
MRPL40-201ENST00000333130 DLEC1Q9Y238 1755 aa26.12■■□□□ 1.77
MRPL40-201ENST00000333130 NLRP10Q86W26 655 aa26.12■■□□□ 1.77
MRPL40-201ENST00000333130 MYD88Q99836 296 aa26.12■■□□□ 1.77
MRPL40-201ENST00000333130 ADCY9O60503 1353 aa26.11■■□□□ 1.77
MRPL40-201ENST00000333130 SUSD4Q5VX71 490 aa26.11■■□□□ 1.77
MRPL40-201ENST00000333130 TRIM28Q13263 835 aaKnown RBP26.1■■□□□ 1.77
MRPL40-201ENST00000333130 ISCA1Q9BUE6 129 aa26.1■■□□□ 1.77
MRPL40-201ENST00000333130 BCL2L13Q9BXK5 485 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms