RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 DBF4Q9UBU7 674 aaPredicted RBP27.03■■□□□ 1.92
YBX1-202ENST00000332220 VAMP4O75379 141 aa27.02■■□□□ 1.92
YBX1-202ENST00000332220 MMP10P09238 476 aa27.02■■□□□ 1.92
YBX1-202ENST00000332220 TCERG1O14776 1098 aaKnown RBP27.01■■□□□ 1.91
YBX1-202ENST00000332220 CCDC30Q5VVM6 783 aa27■■□□□ 1.91
YBX1-202ENST00000332220 XAGE3Q8WTP9 111 aa27■■□□□ 1.91
YBX1-202ENST00000332220 ZBED9Q6R2W3 1325 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 MAP3K15Q6ZN16 1313 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 TM4SF1P30408 202 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 DDR1Q08345 913 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 NFIXQ14938 502 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 HLFQ16534 295 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 COPS6Q7L5N1 327 aa26.99■■□□□ 1.91
YBX1-202ENST00000332220 PPP1R1BQ9UD71 204 aaPredicted RBP26.99■■□□□ 1.91
YBX1-202ENST00000332220 AIMP1Q12904 312 aaKnown RBP26.98■■□□□ 1.91
YBX1-202ENST00000332220 TBC1D9BQ66K14 1250 aa26.98■■□□□ 1.91
YBX1-202ENST00000332220 KIF6Q6ZMV9 814 aa26.98■■□□□ 1.91
YBX1-202ENST00000332220 ZBTB3Q9H5J0 574 aa26.98■■□□□ 1.91
YBX1-202ENST00000332220 HYPKQ9NX55 129 aa26.98■■□□□ 1.91
YBX1-202ENST00000332220 ANKRD31Q8N7Z5 1873 aa26.96■■□□□ 1.91
YBX1-202ENST00000332220 BICDL1Q6ZP65 573 aa26.96■■□□□ 1.91
YBX1-202ENST00000332220 CHMP4AQ9BY43 222 aa26.96■■□□□ 1.91
YBX1-202ENST00000332220 PHAXQ9H814 394 aaKnown RBP26.96■■□□□ 1.91
YBX1-202ENST00000332220 KIAA1551Q9HCM1 1747 aa26.96■■□□□ 1.91
YBX1-202ENST00000332220 ERVV-1B6SEH8 477 aa26.95■■□□□ 1.9
YBX1-202ENST00000332220 POLRMTO00411 1230 aaKnown RBP26.95■■□□□ 1.9
YBX1-202ENST00000332220 N4BP2Q86UW6 1770 aaPredicted RBP26.94■■□□□ 1.9
YBX1-202ENST00000332220 CLEC4GQ6UXB4 293 aa26.94■■□□□ 1.9
YBX1-202ENST00000332220 STK31Q9BXU1 1019 aa26.94■■□□□ 1.9
YBX1-202ENST00000332220 ZNF652Q9Y2D9 606 aa26.94■■□□□ 1.9
YBX1-202ENST00000332220 PARP3Q9Y6F1 533 aa26.94■■□□□ 1.9
YBX1-202ENST00000332220 RGL2O15211 777 aa26.93■■□□□ 1.9
YBX1-202ENST00000332220 FHDC1Q9C0D6 1143 aaPredicted RBP26.92■■□□□ 1.9
YBX1-202ENST00000332220 ATP10DQ9P241 1426 aa26.91■■□□□ 1.9
YBX1-202ENST00000332220 GIGYF2Q6Y7W6 1299 aaKnown RBP26.91■■□□□ 1.9
YBX1-202ENST00000332220 G2E3Q7L622 706 aa26.91■■□□□ 1.9
YBX1-202ENST00000332220 CARMIL3Q8ND23 1372 aa26.9■■□□□ 1.9
YBX1-202ENST00000332220 SLC4A2P04920 1241 aa26.9■■□□□ 1.9
YBX1-202ENST00000332220 KLHL34Q8N239 644 aa26.9■■□□□ 1.9
YBX1-202ENST00000332220 C10orf71Q711Q0 1435 aa26.9■■□□□ 1.9
YBX1-202ENST00000332220 SERPINB2P05120 415 aa26.89■■□□□ 1.9
YBX1-202ENST00000332220 SETDB2Q96T68 719 aa26.89■■□□□ 1.9
YBX1-202ENST00000332220 NIP7Q9Y221 180 aaKnown RBP eCLIP26.89■■□□□ 1.9
YBX1-202ENST00000332220 BRCA1P38398 1863 aaKnown RBP26.88■■□□□ 1.89
YBX1-202ENST00000332220 ANKRD13DQ6ZTN6 518 aa26.88■■□□□ 1.89
YBX1-202ENST00000332220 PLBD2Q8NHP8 589 aa26.88■■□□□ 1.89
YBX1-202ENST00000332220 GPTP24298 496 aa26.87■■□□□ 1.89
YBX1-202ENST00000332220 SYT17Q9BSW7 474 aa26.86■■□□□ 1.89
YBX1-202ENST00000332220 DLEC1Q9Y238 1755 aa26.86■■□□□ 1.89
YBX1-202ENST00000332220 UBN2Q6ZU65 1347 aa26.86■■□□□ 1.89
YBX1-202ENST00000332220 ZNF34Q8IZ26 560 aa26.85■■□□□ 1.89
YBX1-202ENST00000332220 COL11A2P13942 1736 aaPredicted RBP26.85■■□□□ 1.89
YBX1-202ENST00000332220 FLIIQ13045 1269 aa26.84■■□□□ 1.89
YBX1-202ENST00000332220 CD2APQ9Y5K6 639 aa26.84■■□□□ 1.89
YBX1-202ENST00000332220 CACNA1SQ13698 1873 aa26.83■■□□□ 1.89
YBX1-202ENST00000332220 RIC3Q7Z5B4 369 aa26.83■■□□□ 1.89
YBX1-202ENST00000332220 NLGN2Q8NFZ4 835 aa26.83■■□□□ 1.89
YBX1-202ENST00000332220 ADCY9O60503 1353 aa26.83■■□□□ 1.88
YBX1-202ENST00000332220 LAMB2P55268 1798 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 FAM177BA6PVY3 158 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 TCIRG1Q13488 830 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 PRR5LQ6MZQ0 368 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 CCDC24Q8N4L8 307 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 SSH1Q8WYL5 1049 aa26.82■■□□□ 1.88
YBX1-202ENST00000332220 TNRC6CQ9HCJ0 1690 aaKnown RBP26.82■■□□□ 1.88
YBX1-202ENST00000332220 DDX58O95786 925 aaKnown RBP26.81■■□□□ 1.88
YBX1-202ENST00000332220 CT47B1P0C2W7 299 aaPredicted RBP26.81■■□□□ 1.88
YBX1-202ENST00000332220 HSP90AB3PQ58FF7 597 aa26.81■■□□□ 1.88
YBX1-202ENST00000332220 MRPL50Q8N5N7 158 aaKnown RBP26.81■■□□□ 1.88
YBX1-202ENST00000332220 PI4KAP2A4QPH2 592 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 KSR2Q6VAB6 950 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 NBPF5PQ86XG9 351 aaPredicted RBP26.8■■□□□ 1.88
YBX1-202ENST00000332220 PI4KAP1Q8N8J0 262 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 ZNF428Q96B54 188 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 BCL2L13Q9BXK5 485 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 PXDNLA1KZ92 1463 aa26.8■■□□□ 1.88
YBX1-202ENST00000332220 DDX60Q8IY21 1712 aaKnown RBP26.79■■□□□ 1.88
YBX1-202ENST00000332220 SUSD4Q5VX71 490 aa26.79■■□□□ 1.88
YBX1-202ENST00000332220 CNBD1Q8NA66 436 aa26.79■■□□□ 1.88
YBX1-202ENST00000332220 MAP3K2Q9Y2U5 619 aa26.79■■□□□ 1.88
YBX1-202ENST00000332220 ATP5J2-PTCD1G3V325 749 aa26.78■■□□□ 1.88
YBX1-202ENST00000332220 FKBP5Q13451 457 aaPredicted RBP26.78■■□□□ 1.88
YBX1-202ENST00000332220 ALDH1L2Q3SY69 923 aa26.78■■□□□ 1.88
YBX1-202ENST00000332220 NLRP10Q86W26 655 aa26.78■■□□□ 1.88
YBX1-202ENST00000332220 YTHDC1Q96MU7 727 aaKnown RBP26.78■■□□□ 1.88
YBX1-202ENST00000332220 ISCA1Q9BUE6 129 aa26.78■■□□□ 1.88
YBX1-202ENST00000332220 IBTKQ9P2D0 1353 aaPredicted RBP26.78■■□□□ 1.88
YBX1-202ENST00000332220 PARP10Q53GL7 1025 aa26.77■■□□□ 1.88
YBX1-202ENST00000332220 MYD88Q99836 296 aa26.77■■□□□ 1.88
YBX1-202ENST00000332220 METTL22Q9BUU2 404 aaPredicted RBP26.77■■□□□ 1.88
YBX1-202ENST00000332220 NTSR2O95665 410 aa26.76■■□□□ 1.87
YBX1-202ENST00000332220 ABCC12Q96J65 1359 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 NPHP1O15259 732 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 RARSP54136 660 aaKnown RBP26.75■■□□□ 1.87
YBX1-202ENST00000332220 TPTE2Q6XPS3 522 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 NUTM1Q86Y26 1132 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 SMC4Q9NTJ3 1288 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 MYH3P11055 1940 aa26.75■■□□□ 1.87
YBX1-202ENST00000332220 NYXQ9GZU5 481 aa26.74■■□□□ 1.87
YBX1-202ENST00000332220 ARFGEF1Q9Y6D6 1849 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms