RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 KIF6Q6ZMV9 814 aa33.32■■■□□ 2.92
SMDT1-201ENST00000331479 G2E3Q7L622 706 aa33.32■■■□□ 2.92
SMDT1-201ENST00000331479 ZBTB3Q9H5J0 574 aa33.32■■■□□ 2.92
SMDT1-201ENST00000331479 MAP3K15Q6ZN16 1313 aa33.32■■■□□ 2.92
SMDT1-201ENST00000331479 HLFQ16534 295 aa33.31■■■□□ 2.92
SMDT1-201ENST00000331479 COL24A1Q17RW2 1714 aa33.31■■■□□ 2.92
SMDT1-201ENST00000331479 CT47B1P0C2W7 299 aaPredicted RBP33.3■■■□□ 2.92
SMDT1-201ENST00000331479 NLGN1Q8N2Q7 840 aa33.3■■■□□ 2.92
SMDT1-201ENST00000331479 SPON1Q9HCB6 807 aa33.3■■■□□ 2.92
SMDT1-201ENST00000331479 PTGER2P43116 358 aa33.29■■■□□ 2.92
SMDT1-201ENST00000331479 SSH1Q8WYL5 1049 aa33.29■■■□□ 2.92
SMDT1-201ENST00000331479 SGIP1Q9BQI5 828 aa33.29■■■□□ 2.92
SMDT1-201ENST00000331479 ERVV-1B6SEH8 477 aa33.28■■■□□ 2.92
SMDT1-201ENST00000331479 ZNF428Q96B54 188 aa33.27■■■□□ 2.92
SMDT1-201ENST00000331479 BCL2L13Q9BXK5 485 aa33.27■■■□□ 2.92
SMDT1-201ENST00000331479 CACNA1FO60840 1977 aa33.26■■■□□ 2.92
SMDT1-201ENST00000331479 TBC1D9BQ66K14 1250 aa33.26■■■□□ 2.91
SMDT1-201ENST00000331479 CLEC4GQ6UXB4 293 aa33.26■■■□□ 2.91
SMDT1-201ENST00000331479 ANKRD13DQ6ZTN6 518 aa33.25■■■□□ 2.91
SMDT1-201ENST00000331479 MRPL50Q8N5N7 158 aaKnown RBP33.25■■■□□ 2.91
SMDT1-201ENST00000331479 NUP98P52948 1817 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 MMP10P09238 476 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 TM4SF1P30408 202 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 FLIIQ13045 1269 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 NFIXQ14938 502 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 ZNF652Q9Y2D9 606 aa33.24■■■□□ 2.91
SMDT1-201ENST00000331479 RARSP54136 660 aaKnown RBP33.23■■■□□ 2.91
SMDT1-201ENST00000331479 ALDH1L2Q3SY69 923 aa33.23■■■□□ 2.91
SMDT1-201ENST00000331479 BICDL1Q6ZP65 573 aa33.23■■■□□ 2.91
SMDT1-201ENST00000331479 PLBD2Q8NHP8 589 aa33.23■■■□□ 2.91
SMDT1-201ENST00000331479 GIGYF2Q6Y7W6 1299 aaKnown RBP33.22■■■□□ 2.91
SMDT1-201ENST00000331479 RGL2O15211 777 aa33.21■■■□□ 2.91
SMDT1-201ENST00000331479 DDR1Q08345 913 aa33.21■■■□□ 2.91
SMDT1-201ENST00000331479 POLD1P28340 1107 aa33.21■■■□□ 2.91
SMDT1-201ENST00000331479 SMC4Q9NTJ3 1288 aa33.21■■■□□ 2.91
SMDT1-201ENST00000331479 ARFGEF2Q9Y6D5 1785 aa33.19■■■□□ 2.9
SMDT1-201ENST00000331479 RIC3Q7Z5B4 369 aa33.19■■■□□ 2.9
SMDT1-201ENST00000331479 DDX58O95786 925 aaKnown RBP33.18■■■□□ 2.9
SMDT1-201ENST00000331479 ADCY9O60503 1353 aa33.18■■■□□ 2.9
SMDT1-201ENST00000331479 PI4KAP2A4QPH2 592 aa33.17■■■□□ 2.9
SMDT1-201ENST00000331479 POLRMTO00411 1230 aaKnown RBP33.17■■■□□ 2.9
SMDT1-201ENST00000331479 FKBP5Q13451 457 aaPredicted RBP33.17■■■□□ 2.9
SMDT1-201ENST00000331479 PI4KAP1Q8N8J0 262 aa33.17■■■□□ 2.9
SMDT1-201ENST00000331479 NIP7Q9Y221 180 aaKnown RBP eCLIP33.17■■■□□ 2.9
SMDT1-201ENST00000331479 KSR2Q6VAB6 950 aa33.17■■■□□ 2.9
SMDT1-201ENST00000331479 SETDB2Q96T68 719 aa33.17■■■□□ 2.9
SMDT1-201ENST00000331479 ATP10DQ9P241 1426 aa33.17■■■□□ 2.9
SMDT1-201ENST00000331479 GPTP24298 496 aa33.16■■■□□ 2.9
SMDT1-201ENST00000331479 MAP3K2Q9Y2U5 619 aa33.16■■■□□ 2.9
SMDT1-201ENST00000331479 LRP5O75197 1615 aa33.16■■■□□ 2.9
SMDT1-201ENST00000331479 ZNF34Q8IZ26 560 aa33.15■■■□□ 2.9
SMDT1-201ENST00000331479 PARP3Q9Y6F1 533 aa33.15■■■□□ 2.9
SMDT1-201ENST00000331479 BCAR3O75815 825 aa33.14■■■□□ 2.9
SMDT1-201ENST00000331479 TCIRG1Q13488 830 aa33.14■■■□□ 2.9
SMDT1-201ENST00000331479 UBN2Q6ZU65 1347 aa33.14■■■□□ 2.9
SMDT1-201ENST00000331479 ANKRD36CQ5JPF3 1778 aa33.13■■■□□ 2.89
SMDT1-201ENST00000331479 CARMIL3Q8ND23 1372 aa33.13■■■□□ 2.89
SMDT1-201ENST00000331479 SERPINB2P05120 415 aa33.12■■■□□ 2.89
SMDT1-201ENST00000331479 BRPF1P55201 1214 aaPredicted RBP33.12■■■□□ 2.89
SMDT1-201ENST00000331479 HSP90AB3PQ58FF7 597 aa33.12■■■□□ 2.89
SMDT1-201ENST00000331479 F6X3S4 739 aa33.11■■■□□ 2.89
SMDT1-201ENST00000331479 METTL22Q9BUU2 404 aaPredicted RBP33.11■■■□□ 2.89
SMDT1-201ENST00000331479 AFDNP55196 1824 aaKnown RBP33.11■■■□□ 2.89
SMDT1-201ENST00000331479 ATP5J2-PTCD1G3V325 749 aa33.1■■■□□ 2.89
SMDT1-201ENST00000331479 MYD88Q99836 296 aa33.1■■■□□ 2.89
SMDT1-201ENST00000331479 FAM177BA6PVY3 158 aa33.09■■■□□ 2.89
SMDT1-201ENST00000331479 NOB1Q9ULX3 412 aaKnown RBP33.09■■■□□ 2.89
SMDT1-201ENST00000331479 ISCA1Q9BUE6 129 aa33.09■■■□□ 2.89
SMDT1-201ENST00000331479 NRXN2Q9P2S2 1712 aa33.08■■■□□ 2.89
SMDT1-201ENST00000331479 DNAAF4Q8WXU2 420 aa33.08■■■□□ 2.89
SMDT1-201ENST00000331479 PPP1R1BQ9UD71 204 aaPredicted RBP33.08■■■□□ 2.89
SMDT1-201ENST00000331479 PTPRCP08575 1304 aa33.08■■■□□ 2.89
SMDT1-201ENST00000331479 SUSD4Q5VX71 490 aa33.07■■■□□ 2.88
SMDT1-201ENST00000331479 NLRP10Q86W26 655 aa33.07■■■□□ 2.88
SMDT1-201ENST00000331479 NBPF5PQ86XG9 351 aaPredicted RBP33.05■■■□□ 2.88
SMDT1-201ENST00000331479 IGKV5-2P06315 115 aa33.04■■■□□ 2.88
SMDT1-201ENST00000331479 PARP10Q53GL7 1025 aa33.04■■■□□ 2.88
SMDT1-201ENST00000331479 CCDC24Q8N4L8 307 aa33.04■■■□□ 2.88
SMDT1-201ENST00000331479 PRR5LQ6MZQ0 368 aa33.04■■■□□ 2.88
SMDT1-201ENST00000331479 RCAN3Q9UKA8 241 aa33.04■■■□□ 2.88
SMDT1-201ENST00000331479 TRIM28Q13263 835 aaKnown RBP33.03■■■□□ 2.88
SMDT1-201ENST00000331479 KIF16BQ96L93 1317 aa33.03■■■□□ 2.88
SMDT1-201ENST00000331479 CNBD1Q8NA66 436 aa33.02■■■□□ 2.88
SMDT1-201ENST00000331479 NTSR2O95665 410 aa33.01■■■□□ 2.88
SMDT1-201ENST00000331479 NEXNQ0ZGT2 675 aa33.01■■■□□ 2.88
SMDT1-201ENST00000331479 CWF19L2Q2TBE0 894 aaKnown RBP33.01■■■□□ 2.88
SMDT1-201ENST00000331479 KLHL34Q8N239 644 aa33.01■■■□□ 2.88
SMDT1-201ENST00000331479 C10orf71Q711Q0 1435 aa33.01■■■□□ 2.87
SMDT1-201ENST00000331479 TPTE2Q6XPS3 522 aa33■■■□□ 2.87
SMDT1-201ENST00000331479 NUTM1Q86Y26 1132 aa33■■■□□ 2.87
SMDT1-201ENST00000331479 FRAT1Q92837 279 aaPredicted RBP33■■■□□ 2.87
SMDT1-201ENST00000331479 FHDC1Q9C0D6 1143 aaPredicted RBP33■■■□□ 2.87
SMDT1-201ENST00000331479 SLC4A10Q6U841 1118 aa33■■■□□ 2.87
SMDT1-201ENST00000331479 PPP1R42Q7Z4L9 355 aa33■■■□□ 2.87
SMDT1-201ENST00000331479 UTP14AQ9BVJ6 771 aaKnown RBP33■■■□□ 2.87
SMDT1-201ENST00000331479 NEURL1BA8MQ27 555 aa32.99■■■□□ 2.87
SMDT1-201ENST00000331479 BEND3Q5T5X7 828 aa32.99■■■□□ 2.87
SMDT1-201ENST00000331479 NYXQ9GZU5 481 aa32.99■■■□□ 2.87
SMDT1-201ENST00000331479 IBTKQ9P2D0 1353 aaPredicted RBP32.98■■■□□ 2.87
SMDT1-201ENST00000331479 NPHP1O15259 732 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms