RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CHD4Q14839 1912 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 HIP1O00291 1037 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 AMOTQ4VCS5 1084 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 G2E3Q7L622 706 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 LRP10Q7Z4F1 713 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 C16orf71Q8IYS4 520 aaPredicted RBP10.65□□□□□ -0.7
CPNE8-201ENST00000331366 ZBTB22O15209 634 aa10.65□□□□□ -0.7
CPNE8-201ENST00000331366 NECTIN1Q15223 517 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 HMGN5P82970 282 aaKnown RBP10.64□□□□□ -0.71
CPNE8-201ENST00000331366 KCNH5Q8NCM2 988 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 PRIMPOLQ96LW4 560 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 AGXT2Q9BYV1 514 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 PHLPP1O60346 1717 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 CDC25BP30305 580 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 KDM6AO15550 1401 aaPredicted RBP10.64□□□□□ -0.71
CPNE8-201ENST00000331366 ATRNO75882 1429 aa10.64□□□□□ -0.71
CPNE8-201ENST00000331366 PNMA6EA0A0J9YXQ4 647 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 CAVIN2O95810 425 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 TSPYL4Q9UJ04 414 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 MORC2Q9Y6X9 1032 aaPredicted RBP10.63□□□□□ -0.71
CPNE8-201ENST00000331366 AKAP11Q9UKA4 1901 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 UBE2HP62256 183 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 THEMISQ8N1K5 641 aaPredicted RBP10.63□□□□□ -0.71
CPNE8-201ENST00000331366 SNX14Q9Y5W7 946 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 DDX49Q9Y6V7 483 aaKnown RBP10.63□□□□□ -0.71
CPNE8-201ENST00000331366 NID2Q14112 1375 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 CCDC183Q5T5S1 534 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 MCM10Q7L590 875 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 HYPKQ9NX55 129 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 CARMIL3Q8ND23 1372 aa10.63□□□□□ -0.71
CPNE8-201ENST00000331366 SAFB2Q14151 953 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 RABL6Q3YEC7 729 aaPredicted RBP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 AMOTL2Q9Y2J4 779 aa10.62□□□□□ -0.71
CPNE8-201ENST00000331366 PRIM1P49642 420 aaKnown RBP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 ATL3Q6DD88 541 aa10.62□□□□□ -0.71
CPNE8-201ENST00000331366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 ZGPATQ8N5A5 531 aaKnown RBP10.62□□□□□ -0.71
CPNE8-201ENST00000331366 STK31Q9BXU1 1019 aa10.62□□□□□ -0.71
CPNE8-201ENST00000331366 GLRX3O76003 335 aaKnown RBP10.61□□□□□ -0.71
CPNE8-201ENST00000331366 EVCP57679 992 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 PIBF1Q8WXW3 757 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 HMG20BQ9P0W2 317 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 PALD1Q9ULE6 856 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 MAST2Q6P0Q8 1798 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 ZSCAN22P10073 491 aaPredicted RBP10.61□□□□□ -0.71
CPNE8-201ENST00000331366 PDE4CQ08493 712 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 PKP1Q13835 747 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 RHPN1Q8TCX5 695 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 MAP4K1Q92918 833 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 NCKAP5LQ9HCH0 1330 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 ST3GAL1Q11201 340 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 GPR108Q9NPR9 543 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.61□□□□□ -0.71
CPNE8-201ENST00000331366 EID1Q9Y6B2 187 aa10.61□□□□□ -0.71
CPNE8-201ENST00000331366 DCTN1Q14203 1278 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 STAG3Q9UJ98 1225 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 LIMCH1Q9UPQ0 1083 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 ATP6V1DQ9Y5K8 247 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 MAP3K15Q6ZN16 1313 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 ITGB4P16144 1822 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 SASS6Q6UVJ0 657 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 TSPY26PQ9H489 355 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 WDR19Q8NEZ3 1342 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 FBLN1P23142 703 aa10.6□□□□□ -0.71
CPNE8-201ENST00000331366 RTF1Q92541 710 aaKnown RBP10.6□□□□□ -0.71
CPNE8-201ENST00000331366 C1orf167Q5SNV9 1468 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 FKBP5Q13451 457 aaPredicted RBP10.59□□□□□ -0.71
CPNE8-201ENST00000331366 CNTROBQ8N137 903 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 EVI5LQ96CN4 794 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 CTIFO43310 598 aaKnown RBP10.59□□□□□ -0.71
CPNE8-201ENST00000331366 KCNJ6P48051 423 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 SARM1Q6SZW1 724 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 F13A1P00488 732 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 MCTP1Q6DN14 999 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 ARHGEF25Q86VW2 580 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 MYRIPQ8NFW9 859 aa10.59□□□□□ -0.71
CPNE8-201ENST00000331366 SALL1Q9NSC2 1324 aa10.58□□□□□ -0.71
CPNE8-201ENST00000331366 HSP90AA2PQ14568 343 aaPredicted RBP10.58□□□□□ -0.72
CPNE8-201ENST00000331366 PDIA6Q15084 440 aa10.58□□□□□ -0.72
CPNE8-201ENST00000331366 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
CPNE8-201ENST00000331366 RUFY2Q8WXA3 655 aa10.58□□□□□ -0.72
CPNE8-201ENST00000331366 IL25Q9H293 177 aa10.58□□□□□ -0.72
CPNE8-201ENST00000331366 FAM193AP78312 1265 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 LLPHQ9BRT6 129 aaKnown RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 MTMR6Q9Y217 621 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 LAMB1P07942 1786 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 COL5A3P25940 1745 aaPredicted RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 ANKRD1Q15327 319 aa10.57□□□□□ -0.72
CPNE8-201ENST00000331366 TRIM44Q96DX7 344 aaPredicted RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 LRRFIP2Q9Y608 721 aaKnown RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 HSP90AA1P07900 732 aaKnown RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 UBTFL1P0CB47 393 aaPredicted RBP10.57□□□□□ -0.72
CPNE8-201ENST00000331366 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms