RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 ZNF142P52746 1687 aaPredicted RBP12.14□□□□□ -0.47
RARB-201ENST00000330688 LINS1Q8NG48 757 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
RARB-201ENST00000330688 ECHDC1Q9NTX5 307 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 SLC39A6Q13433 755 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 LARP6Q9BRS8 491 aaKnown RBP12.14□□□□□ -0.47
RARB-201ENST00000330688 ERBB3P21860 1342 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 GRM8O00222 908 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
RARB-201ENST00000330688 AK2P54819 239 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 PTH1RQ03431 593 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 FOXD4L6Q3SYB3 417 aaPredicted RBP12.13□□□□□ -0.47
RARB-201ENST00000330688 FOXD4L3Q6VB84 417 aaPredicted RBP12.13□□□□□ -0.47
RARB-201ENST00000330688 PROSER2Q86WR7 435 aaPredicted RBP12.13□□□□□ -0.47
RARB-201ENST00000330688 BICC1Q9H694 974 aaKnown RBP12.13□□□□□ -0.47
RARB-201ENST00000330688 UTYO14607 1347 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 SASH1O94885 1247 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
RARB-201ENST00000330688 CPA1P15085 419 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 RUFY3Q7L099 469 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
RARB-201ENST00000330688 SYCE3A1L190 88 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 IGKV5-2P06315 115 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 AACSQ86V21 672 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 GDPD2Q9HCC8 539 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 HDAC5Q9UQL6 1122 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
RARB-201ENST00000330688 MBD3O95983 291 aa12.12□□□□□ -0.47
RARB-201ENST00000330688 ANP32BQ92688 251 aaKnown RBP12.12□□□□□ -0.47
RARB-201ENST00000330688 EAF2Q96CJ1 260 aaPredicted RBP12.12□□□□□ -0.47
RARB-201ENST00000330688 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 CRYBG1Q9Y4K1 1723 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
RARB-201ENST00000330688 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
RARB-201ENST00000330688 ADCK5Q3MIX3 580 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 RUFY2Q8WXA3 655 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 CCDC8Q9H0W5 538 aaPredicted RBP12.11□□□□□ -0.47
RARB-201ENST00000330688 SLC52A2Q9HAB3 445 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 NLRP2Q9NX02 1062 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 LIMCH1Q9UPQ0 1083 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 CAMTA1Q9Y6Y1 1673 aa12.11□□□□□ -0.47
RARB-201ENST00000330688 TRPM3Q9HCF6 1732 aaPredicted RBP12.11□□□□□ -0.47
RARB-201ENST00000330688 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 MYL6BP14649 208 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 CASTP20810 708 aaKnown RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 RIC3Q7Z5B4 369 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 EVI5LQ96CN4 794 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 GPATCH3Q96I76 525 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 LARGE1O95461 756 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 G3BP1Q13283 466 aaKnown RBP eCLIP12.1□□□□□ -0.47
RARB-201ENST00000330688 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
RARB-201ENST00000330688 TLR7Q9NYK1 1049 aaKnown RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
RARB-201ENST00000330688 PHKG2P15735 406 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 USP48Q86UV5 1035 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 SIL1Q9H173 461 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 LARP1Q6PKG0 1096 aaKnown RBP12.09□□□□□ -0.47
RARB-201ENST00000330688 COPS6Q7L5N1 327 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 KCNB2Q92953 911 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
RARB-201ENST00000330688 FAM227BQ96M60 508 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 SIPA1L3O60292 1781 aaPredicted RBP12.09□□□□□ -0.47
RARB-201ENST00000330688 NEURL1BA8MQ27 555 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 PDLIM2Q96JY6 352 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 JAKMIP1Q96N16 626 aaKnown RBP12.09□□□□□ -0.47
RARB-201ENST00000330688 ADAMTS7Q9UKP4 1686 aa12.09□□□□□ -0.47
RARB-201ENST00000330688 DTNBO60941 627 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 LMTK3Q96Q04 1460 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 ADAMTSL3P82987 1691 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 TATP17735 454 aaPredicted RBP12.08□□□□□ -0.48
RARB-201ENST00000330688 SYT1P21579 422 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 GCKRQ14397 625 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
RARB-201ENST00000330688 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 MST1RQ04912 1400 aa12.08□□□□□ -0.48
RARB-201ENST00000330688 ZSCAN22P10073 491 aaPredicted RBP12.07□□□□□ -0.48
RARB-201ENST00000330688 PIP4K2AP48426 406 aaPredicted RBP12.07□□□□□ -0.48
RARB-201ENST00000330688 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
RARB-201ENST00000330688 LRP10Q7Z4F1 713 aa12.07□□□□□ -0.48
RARB-201ENST00000330688 ZSCAN30Q86W11 494 aa12.07□□□□□ -0.48
RARB-201ENST00000330688 NAP1L5Q96NT1 182 aaPredicted RBP12.07□□□□□ -0.48
RARB-201ENST00000330688 MYD88Q99836 296 aa12.07□□□□□ -0.48
RARB-201ENST00000330688 BOLA2Q9H3K6 86 aa12.07□□□□□ -0.48
RARB-201ENST00000330688 PDRG1Q9NUG6 133 aa12.07□□□□□ -0.48
RARB-201ENST00000330688 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms