RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 CAVIN2O95810 425 aa23.46■■□□□ 1.35
CAPN12-201ENST00000328867 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 V9GYY5 206 aaPredicted RBP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 CDK12Q9NYV4 1490 aaPredicted RBP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 HNRNPH2P55795 449 aaKnown RBP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 TRIM34Q9BYJ4 488 aa23.46■■□□□ 1.35
CAPN12-201ENST00000328867 LIG1P18858 919 aa23.46■■□□□ 1.35
CAPN12-201ENST00000328867 RBM43Q6ZSC3 357 aaKnown RBP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 ZSCAN31Q96LW9 406 aaPredicted RBP23.46■■□□□ 1.35
CAPN12-201ENST00000328867 CCDC144BQ3MJ40 725 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 TTC6Q86TZ1 520 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 UNC5CLQ8IV45 518 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 CCDC144CPQ8IYA2 1237 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 ST7Q9NRC1 585 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 NRXN3Q9Y4C0 1643 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 ZNF446Q9NWS9 450 aa23.45■■□□□ 1.34
CAPN12-201ENST00000328867 ZNF165P49910 485 aa23.44■■□□□ 1.34
CAPN12-201ENST00000328867 CKAP2LQ8IYA6 745 aa23.44■■□□□ 1.34
CAPN12-201ENST00000328867 SH2B1Q9NRF2 756 aaPredicted RBP23.44■■□□□ 1.34
CAPN12-201ENST00000328867 FEZ2Q9UHY8 353 aaPredicted RBP23.44■■□□□ 1.34
CAPN12-201ENST00000328867 VPS37CA5D8V6 355 aaPredicted RBP23.44■■□□□ 1.34
CAPN12-201ENST00000328867 DCTN1Q14203 1278 aa23.44■■□□□ 1.34
CAPN12-201ENST00000328867 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
CAPN12-201ENST00000328867 CCDC83Q8IWF9 413 aa23.43■■□□□ 1.34
CAPN12-201ENST00000328867 IL25Q9H293 177 aa23.43■■□□□ 1.34
CAPN12-201ENST00000328867 H2AFXP16104 143 aaPredicted RBP23.43■■□□□ 1.34
CAPN12-201ENST00000328867 DACT1Q9NYF0 836 aa23.43■■□□□ 1.34
CAPN12-201ENST00000328867 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.43■■□□□ 1.34
CAPN12-201ENST00000328867 SGSM2O43147 1006 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 KCND1Q9NSA2 647 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 GOLGA6L4A6NEF3 574 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 CHL1O00533 1208 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 SARM1Q6SZW1 724 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 CHMP3Q9Y3E7 222 aa23.42■■□□□ 1.34
CAPN12-201ENST00000328867 USP27XA6NNY8 438 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 FBLN1P23142 703 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 MAPK8IP2Q13387 824 aaPredicted RBP23.41■■□□□ 1.34
CAPN12-201ENST00000328867 TEX35Q5T0J7 233 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 MRFAP1L1Q96HT8 127 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
CAPN12-201ENST00000328867 HYPKQ9NX55 129 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 ERBB3P21860 1342 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 SKILP12757 684 aa23.41■■□□□ 1.34
CAPN12-201ENST00000328867 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
CAPN12-201ENST00000328867 MAP2P11137 1827 aaKnown RBP23.4■■□□□ 1.34
CAPN12-201ENST00000328867 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
CAPN12-201ENST00000328867 SCAND2PQ9GZW5 306 aaPredicted RBP23.4■■□□□ 1.34
CAPN12-201ENST00000328867 LSG1Q9H089 658 aaKnown RBP23.4■■□□□ 1.34
CAPN12-201ENST00000328867 LARGE1O95461 756 aa23.4■■□□□ 1.34
CAPN12-201ENST00000328867 RAD51AP2Q09MP3 1159 aa23.4■■□□□ 1.34
CAPN12-201ENST00000328867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
CAPN12-201ENST00000328867 RASEFQ8IZ41 740 aa23.4■■□□□ 1.34
CAPN12-201ENST00000328867 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
CAPN12-201ENST00000328867 TTC21AQ8NDW8 1320 aa23.39■■□□□ 1.34
CAPN12-201ENST00000328867 EDC4Q6P2E9 1401 aaKnown RBP23.39■■□□□ 1.34
CAPN12-201ENST00000328867 ATP8B2P98198 1209 aa23.39■■□□□ 1.34
CAPN12-201ENST00000328867 VPS53Q5VIR6 699 aa23.39■■□□□ 1.34
CAPN12-201ENST00000328867 FHOD1Q9Y613 1164 aa23.39■■□□□ 1.34
CAPN12-201ENST00000328867 IRX3P78415 501 aaPredicted RBP23.39■■□□□ 1.33
CAPN12-201ENST00000328867 CCAR2Q8N163 923 aaKnown RBP23.39■■□□□ 1.33
CAPN12-201ENST00000328867 EMILIN1Q9Y6C2 1016 aa23.39■■□□□ 1.33
CAPN12-201ENST00000328867 GOLGA6L19H0YKK7 550 aa23.38■■□□□ 1.33
CAPN12-201ENST00000328867 CASTP20810 708 aaKnown RBP23.38■■□□□ 1.33
CAPN12-201ENST00000328867 TXLNBQ8N3L3 684 aa23.38■■□□□ 1.33
CAPN12-201ENST00000328867 GNAI3P08754 354 aa23.38■■□□□ 1.33
CAPN12-201ENST00000328867 DNAJC25Q9H1X3 360 aa23.38■■□□□ 1.33
CAPN12-201ENST00000328867 EFCC1Q9HA90 598 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 TPM4P67936 248 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 MUM1L1Q5H9M0 696 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 GTF3C6Q969F1 213 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 TRERF1Q96PN7 1200 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 L2HGDHQ9H9P8 463 aa23.37■■□□□ 1.33
CAPN12-201ENST00000328867 WASLO00401 505 aaPredicted RBP23.36■■□□□ 1.33
CAPN12-201ENST00000328867 PDCP20941 246 aa23.36■■□□□ 1.33
CAPN12-201ENST00000328867 LARP1BQ659C4 914 aaKnown RBP23.36■■□□□ 1.33
CAPN12-201ENST00000328867 PDRG1Q9NUG6 133 aa23.36■■□□□ 1.33
CAPN12-201ENST00000328867 TTC21BQ7Z4L5 1316 aa23.36■■□□□ 1.33
CAPN12-201ENST00000328867 PNMA6AP0CW24 399 aaPredicted RBP23.35■■□□□ 1.33
CAPN12-201ENST00000328867 CCDC69A6NI79 296 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 MLECQ14165 292 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 METP08581 1390 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 CLCN6P51797 869 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 CCZ1BP86790 482 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 CCZ1P86791 482 aaPredicted RBP23.35■■□□□ 1.33
CAPN12-201ENST00000328867 SPATA32Q96LK8 384 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 TM6SF1Q9BZW5 370 aa23.35■■□□□ 1.33
CAPN12-201ENST00000328867 PNMA6EA0A0J9YXQ4 647 aa23.34■■□□□ 1.33
CAPN12-201ENST00000328867 TRMT1Q9NXH9 659 aaKnown RBP23.34■■□□□ 1.33
CAPN12-201ENST00000328867 F6X3S4 739 aa23.34■■□□□ 1.33
CAPN12-201ENST00000328867 PLA2G4AP47712 749 aa23.34■■□□□ 1.33
CAPN12-201ENST00000328867 ERCC6LQ2NKX8 1250 aa23.34■■□□□ 1.33
CAPN12-201ENST00000328867 ARGLU1Q9NWB6 273 aaPredicted RBP23.34■■□□□ 1.33
CAPN12-201ENST00000328867 MON2Q7Z3U7 1717 aa23.33■■□□□ 1.33
CAPN12-201ENST00000328867 TECPR2O15040 1411 aa23.33■■□□□ 1.33
CAPN12-201ENST00000328867 ARID5BQ14865 1188 aa23.33■■□□□ 1.33
CAPN12-201ENST00000328867 FILIP1Q7Z7B0 1213 aa23.33■■□□□ 1.33
CAPN12-201ENST00000328867 CYP46A1Q9Y6A2 500 aa23.33■■□□□ 1.33
CAPN12-201ENST00000328867 TNNT3P45378 269 aaPredicted RBP23.33■■□□□ 1.32
CAPN12-201ENST00000328867 NPHP1O15259 732 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms