RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 ZNF385CQ66K41 422 aaPredicted RBP3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 ZIC5Q96T25 663 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 HINFPQ9BQA5 517 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 ZCCHC2Q9C0B9 1178 aaKnown RBP3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 NEUROD4Q9HD90 331 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 FGFR3P22607 806 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 C14orf37Q86TY3 774 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 RHPN1Q8TCX5 695 aa3.29□□□□□ -1.88
CCDC144A-201ENST00000328495 BNIP3LO60238 219 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 BMP4P12644 408 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 SAMD5Q5TGI4 173 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 C1orf53Q5VUE5 145 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 STAG2Q8N3U4 1231 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 FAM200AQ8TCP9 573 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 SCG3Q8WXD2 468 aaKnown RBP3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 ENAMQ9NRM1 1142 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 NDFIP2Q9NV92 336 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 SERPINA10Q9UK55 444 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 ATAD2Q6PL18 1390 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 FAM157BP0CG42 384 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 SH3PXD2AQ5TCZ1 1133 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 POTEAQ6S8J7 498 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 WHAMMQ8TF30 809 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 GDF2Q9UK05 429 aaPredicted RBP3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 ADGRL1O94910 1474 aa3.28□□□□□ -1.88
CCDC144A-201ENST00000328495 DCDC2BA2VCK2 349 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 KHNYNO15037 678 aaKnown RBP3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 CELA2BP08218 269 aaPredicted RBP3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 IGFBP4P22692 258 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 HIF1AQ16665 826 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 CDCA8Q53HL2 280 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 LYPD4Q6UWN0 246 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 CHMP7Q8WUX9 453 aaPredicted RBP3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 OXCT2Q9BYC2 517 aaPredicted RBP3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 PHACTR1Q9C0D0 580 aa3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 NOVA2Q9UNW9 492 aaKnown RBP3.28□□□□□ -1.89
CCDC144A-201ENST00000328495 RNF225M0QZC1 329 aaPredicted RBP3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 C21orf2O43822 256 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 BCRP11274 1271 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ARXQ96QS3 562 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 C2orf49Q9BVC5 232 aaPredicted RBP3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ANKIB1Q9P2G1 1089 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 HCN4Q9Y3Q4 1203 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 MAPTP10636 758 aaKnown RBP3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 TNP2Q05952 138 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 LAMC2Q13753 1193 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 LRRC69Q6ZNQ3 347 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ERICH6Q7L0X2 663 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 GOLGA6L1Q8N7Z2 621 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ACDQ96AP0 544 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 LRRC4BQ9NT99 713 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ADAMTS8Q9UP79 889 aa3.27□□□□□ -1.89
CCDC144A-201ENST00000328495 ARHGEF15O94989 841 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 MARSP56192 900 aaKnown RBP3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ELOAQ14241 798 aaKnown RBP3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 FAM182BQ5T319 152 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 VTI1AQ96AJ9 217 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 KLRG1Q96E93 195 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ARID3CA6NKF2 412 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 FOXO3O43524 673 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 SWI5Q1ZZU3 235 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ALDH16A1Q8IZ83 802 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 NEDD1Q8NHV4 660 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 PBXIP1Q96AQ6 731 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 CCDC180Q9P1Z9 1646 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ACIN1Q9UKV3 1341 aaKnown RBP3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 OIP5O43482 229 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ATG7O95352 703 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 ARAFP10398 606 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 CD33P20138 364 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 CTBSQ01459 385 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 SLCO4C1Q6ZQN7 724 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 NGLY1Q96IV0 654 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 MARK1Q9P0L2 795 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 KIAA1210Q9ULL0 1709 aa3.26□□□□□ -1.89
CCDC144A-201ENST00000328495 EFSO43281 561 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 LGR5O75473 907 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 PRELPP51888 382 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 RTN1Q16799 776 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 SCARF2Q96GP6 870 aaPredicted RBP3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 HSH2DQ96JZ2 352 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 AVENQ9NQS1 362 aaPredicted RBP3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 NHSL1Q5SYE7 1610 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 WEE1P30291 646 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 PODNQ7Z5L7 613 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 C7orf43Q8WVR3 580 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 CEP63Q96MT8 703 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 PRR12Q9ULL5 1215 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 SNAPC4Q5SXM2 1469 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 C2CD2LO14523 706 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 ADH6P28332 368 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 CCDC82Q8N4S0 544 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 SUSD3Q96L08 255 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 GGA1Q9UJY5 639 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 ZMIZ1Q9ULJ6 1067 aa3.25□□□□□ -1.89
CCDC144A-201ENST00000328495 SRPK2P78362 688 aaKnown RBP3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 NEUROD1Q13562 356 aa3.24□□□□□ -1.89
CCDC144A-201ENST00000328495 IER5Q5VY09 327 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms