RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 PHACTR1Q9C0D0 580 aa7.35□□□□□ -1.23
SKP1-201ENST00000328392 KHNYNO15037 678 aaKnown RBP7.34□□□□□ -1.23
SKP1-201ENST00000328392 MAPTP10636 758 aaKnown RBP7.34□□□□□ -1.23
SKP1-201ENST00000328392 C1orf229Q6ZS94 237 aaPredicted RBP7.34□□□□□ -1.23
SKP1-201ENST00000328392 C2orf49Q9BVC5 232 aaPredicted RBP7.34□□□□□ -1.23
SKP1-201ENST00000328392 STRN4Q9NRL3 753 aa7.34□□□□□ -1.23
SKP1-201ENST00000328392 NOVA2Q9UNW9 492 aaKnown RBP7.34□□□□□ -1.23
SKP1-201ENST00000328392 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
SKP1-201ENST00000328392 BMP4P12644 408 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 CD33P20138 364 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 HIRAP54198 1017 aaPredicted RBP7.33□□□□□ -1.24
SKP1-201ENST00000328392 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 ZNF280CQ8ND82 737 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 FAM200AQ8TCP9 573 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 RHPN1Q8TCX5 695 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 OXCT2Q9BYC2 517 aaPredicted RBP7.33□□□□□ -1.24
SKP1-201ENST00000328392 ZMIZ1Q9ULJ6 1067 aa7.33□□□□□ -1.24
SKP1-201ENST00000328392 NSFL1CQ9UNZ2 370 aaKnown RBP7.33□□□□□ -1.24
SKP1-201ENST00000328392 BCRP11274 1271 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 MAP2K3P46734 347 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 C1orf53Q5VUE5 145 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 ALDH16A1Q8IZ83 802 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 NGLY1Q96IV0 654 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 CHMP3Q9Y3E7 222 aa7.32□□□□□ -1.24
SKP1-201ENST00000328392 FAM157BP0CG42 384 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 IGFBP4P22692 258 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 MAP3K10Q02779 954 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 STK32AQ8WU08 396 aa7.31□□□□□ -1.24
SKP1-201ENST00000328392 EFSO43281 561 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 OIP5O43482 229 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 WEE1P30291 646 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 SUSD3Q96L08 255 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 NEUROD4Q9HD90 331 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 GGA1Q9UJY5 639 aa7.3□□□□□ -1.24
SKP1-201ENST00000328392 SHISA8B8ZZ34 492 aa7.29□□□□□ -1.24
SKP1-201ENST00000328392 GSK3AP49840 483 aa7.29□□□□□ -1.24
SKP1-201ENST00000328392 FAM69CQ0P6D2 419 aa7.29□□□□□ -1.24
SKP1-201ENST00000328392 SFSWAPQ12872 951 aaKnown RBP7.29□□□□□ -1.24
SKP1-201ENST00000328392 PRIMPOLQ96LW4 560 aa7.29□□□□□ -1.24
SKP1-201ENST00000328392 KLF15Q9UIH9 416 aa7.29□□□□□ -1.24
SKP1-201ENST00000328392 ACIN1Q9UKV3 1341 aaKnown RBP7.28□□□□□ -1.24
SKP1-201ENST00000328392 MARSP56192 900 aaKnown RBP7.28□□□□□ -1.24
SKP1-201ENST00000328392 RETREG2Q8NC44 543 aa7.28□□□□□ -1.24
SKP1-201ENST00000328392 GALNT6Q8NCL4 622 aa7.28□□□□□ -1.24
SKP1-201ENST00000328392 PBXIP1Q96AQ6 731 aa7.28□□□□□ -1.24
SKP1-201ENST00000328392 MARK1Q9P0L2 795 aa7.28□□□□□ -1.24
SKP1-201ENST00000328392 GPC6Q9Y625 555 aaPredicted RBP7.28□□□□□ -1.24
SKP1-201ENST00000328392 DNMT3AQ9Y6K1 912 aaPredicted RBP7.28□□□□□ -1.24
SKP1-201ENST00000328392 CARNS1A5YM72 827 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 NEURL1BA8MQ27 555 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 PRMT3O60678 531 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 ATG7O95352 703 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
SKP1-201ENST00000328392 ELOAQ14241 798 aaKnown RBP7.27□□□□□ -1.25
SKP1-201ENST00000328392 FAM182BQ5T319 152 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 NEDD1Q8NHV4 660 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 EDARADDQ8WWZ3 215 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 CEP63Q96MT8 703 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 ENAMQ9NRM1 1142 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 GDF2Q9UK05 429 aaPredicted RBP7.27□□□□□ -1.25
SKP1-201ENST00000328392 BCS1LQ9Y276 419 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.25
SKP1-201ENST00000328392 ARAFP10398 606 aa7.26□□□□□ -1.25
SKP1-201ENST00000328392 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
SKP1-201ENST00000328392 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
SKP1-201ENST00000328392 GOLGA6L1Q8N7Z2 621 aa7.26□□□□□ -1.25
SKP1-201ENST00000328392 SLC30A3Q99726 388 aa7.26□□□□□ -1.25
SKP1-201ENST00000328392 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
SKP1-201ENST00000328392 IRS1P35568 1242 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 SNRPNP63162 240 aaKnown RBP7.25□□□□□ -1.25
SKP1-201ENST00000328392 TYRO3Q06418 890 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 KCNMA1Q12791 1236 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 FKBP5Q13451 457 aaPredicted RBP7.25□□□□□ -1.25
SKP1-201ENST00000328392 LAMC2Q13753 1193 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 OCLNQ16625 522 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 RTN1Q16799 776 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 SLCO4C1Q6ZQN7 724 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 QTRT2Q9H974 415 aaKnown RBP7.25□□□□□ -1.25
SKP1-201ENST00000328392 BRD7Q9NPI1 651 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 LRRC4BQ9NT99 713 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 ANKIB1Q9P2G1 1089 aa7.25□□□□□ -1.25
SKP1-201ENST00000328392 FOXO3O43524 673 aa7.24□□□□□ -1.25
SKP1-201ENST00000328392 PPP1R15AO75807 674 aaPredicted RBP7.24□□□□□ -1.25
SKP1-201ENST00000328392 EPXP11678 715 aa7.24□□□□□ -1.25
SKP1-201ENST00000328392 BTLAQ7Z6A9 289 aa7.24□□□□□ -1.25
SKP1-201ENST00000328392 RAB44Q7Z6P3 723 aaPredicted RBP7.24□□□□□ -1.25
SKP1-201ENST00000328392 SLAIN2Q9P270 581 aa7.24□□□□□ -1.25
SKP1-201ENST00000328392 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
SKP1-201ENST00000328392 RASSF7Q02833 373 aa7.23□□□□□ -1.25
SKP1-201ENST00000328392 DGKZQ13574 1117 aa7.23□□□□□ -1.25
SKP1-201ENST00000328392 SWI5Q1ZZU3 235 aa7.23□□□□□ -1.25
SKP1-201ENST00000328392 ZNF468Q5VIY5 522 aaPredicted RBP7.23□□□□□ -1.25
SKP1-201ENST00000328392 CAPN12Q6ZSI9 719 aa7.23□□□□□ -1.25
SKP1-201ENST00000328392 DMGDHQ9UI17 866 aaKnown RBP7.23□□□□□ -1.25
SKP1-201ENST00000328392 HOXB4P17483 251 aaPredicted RBP7.22□□□□□ -1.25
SKP1-201ENST00000328392 ADH6P28332 368 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms