RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 GNAI3P08754 354 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
CCDC60-201ENST00000327554 TNMDQ9H2S6 317 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 IL1RAPL2Q9NP60 686 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 ITSN1Q15811 1721 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 CDC25BP30305 580 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 KRT85P78386 507 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 SLC20A2Q08357 652 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
CCDC60-201ENST00000327554 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC60-201ENST00000327554 V9GYY5 206 aaPredicted RBP15.17■□□□□ 0.02
CCDC60-201ENST00000327554 TULP2O00295 520 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 CDK11BP21127 795 aaKnown RBP15.16■□□□□ 0.02
CCDC60-201ENST00000327554 FAM193AP78312 1265 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 SLFNL1Q499Z3 407 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 ST7Q9NRC1 585 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 MIS18AQ9NYP9 233 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
CCDC60-201ENST00000327554 ZSCAN31Q96LW9 406 aaPredicted RBP15.16■□□□□ 0.02
CCDC60-201ENST00000327554 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
CCDC60-201ENST00000327554 FAM173BQ6P4H8 233 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 LRRC8AQ8IWT6 810 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 ERO1AQ96HE7 468 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 CLSTN2Q9H4D0 955 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 LRRFIP2Q9Y608 721 aaKnown RBP15.15■□□□□ 0.02
CCDC60-201ENST00000327554 C3P01024 1663 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 ERICH4A6NGS2 130 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 ELF2Q15723 593 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 CDC37L1Q7L3B6 337 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 KIF1BPQ96EK5 621 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 CALCOCO1Q9P1Z2 691 aa15.15■□□□□ 0.02
CCDC60-201ENST00000327554 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
CCDC60-201ENST00000327554 RGPD1P0DJD0 1748 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 CAPN2P17655 700 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
CCDC60-201ENST00000327554 ARID5BQ14865 1188 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 ME3Q16798 604 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 COG3Q96JB2 828 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
CCDC60-201ENST00000327554 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 ZNF165P49910 485 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 FERMT3Q86UX7 667 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 CREBRFQ8IUR6 639 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 DNAJC25Q9H1X3 360 aa15.14■□□□□ 0.01
CCDC60-201ENST00000327554 CACNA1FO60840 1977 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 NECAB1Q8N987 351 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 SLC52A1Q9NWF4 448 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 AKAP12Q02952 1782 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 RIMBP3CA6NJZ7 1639 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 RIMBP3BA6NNM3 1639 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 RIMBP3Q9UFD9 1639 aa15.13■□□□□ 0.01
CCDC60-201ENST00000327554 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
CCDC60-201ENST00000327554 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
CCDC60-201ENST00000327554 LARP1BQ659C4 914 aaKnown RBP15.12■□□□□ 0.01
CCDC60-201ENST00000327554 SARM1Q6SZW1 724 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 SSH3Q8TE77 659 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 TM6SF1Q9BZW5 370 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 TTC21BQ7Z4L5 1316 aa15.12■□□□□ 0.01
CCDC60-201ENST00000327554 NEMFO60524 1076 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 FLIIQ13045 1269 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 KCNB2Q92953 911 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
CCDC60-201ENST00000327554 ADGRL3Q9HAR2 1447 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 SLU7O95391 586 aaKnown RBP15.11■□□□□ 0.01
CCDC60-201ENST00000327554 CYP2C19P33261 490 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 CCZ1BP86790 482 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
CCDC60-201ENST00000327554 PTH1RQ03431 593 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 IQCB1Q15051 598 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 CYP46A1Q9Y6A2 500 aa15.11■□□□□ 0.01
CCDC60-201ENST00000327554 RIMS1Q86UR5 1692 aaKnown RBP15.1■□□□□ 0.01
CCDC60-201ENST00000327554 NR1I2O75469 434 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 H2AFXP16104 143 aaPredicted RBP15.1■□□□□ 0.01
CCDC60-201ENST00000327554 LEO1Q8WVC0 666 aaPredicted RBP15.1■□□□□ 0.01
CCDC60-201ENST00000327554 MRFAP1L1Q96HT8 127 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 SPATA32Q96LK8 384 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 SCAND2PQ9GZW5 306 aaPredicted RBP15.1■□□□□ 0.01
CCDC60-201ENST00000327554 TSPYL4Q9UJ04 414 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 RAB11FIP3O75154 756 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 SKILP12757 684 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 USP44Q9H0E7 712 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 TPCN1Q9ULQ1 816 aa15.1■□□□□ 0.01
CCDC60-201ENST00000327554 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
CCDC60-201ENST00000327554 CCAR2Q8N163 923 aaKnown RBP15.09■□□□□ 0.01
CCDC60-201ENST00000327554 RHPN1Q8TCX5 695 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
CCDC60-201ENST00000327554 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms