RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PLSCR1O15162 318 aa12.95□□□□□ -0.34
VIPAS39-201ENST00000327028 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
VIPAS39-201ENST00000327028 RIC3Q7Z5B4 369 aa12.95□□□□□ -0.34
VIPAS39-201ENST00000327028 IBTKQ9P2D0 1353 aaPredicted RBP12.95□□□□□ -0.34
VIPAS39-201ENST00000327028 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 KCNQ4P56696 695 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 APBA3O96018 575 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 KIF6Q6ZMV9 814 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 METTL22Q9BUU2 404 aaPredicted RBP12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 SRCIN1Q9C0H9 1055 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 ZNF330Q9Y3S2 320 aaPredicted RBP12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 AFDNP55196 1824 aaKnown RBP12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
VIPAS39-201ENST00000327028 LRRC4BQ9NT99 713 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 ZBTB40Q9NUA8 1239 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 COL15A1P39059 1388 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 ALDH1L1O75891 902 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 MAP3K15Q6ZN16 1313 aa12.93□□□□□ -0.34
VIPAS39-201ENST00000327028 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 TXNRD1Q16881 649 aa12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 UBR3Q6ZT12 1888 aa12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
VIPAS39-201ENST00000327028 NUP98P52948 1817 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 A0A087WZG4 1122 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 RPS6KA4O75676 772 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 MYD88Q99836 296 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 C4AP0C0L4 1744 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 GNPATO15228 680 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 PROM2Q8N271 834 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 MEIS3Q99687 375 aa12.91□□□□□ -0.34
VIPAS39-201ENST00000327028 IGKV5-2P06315 115 aa12.9□□□□□ -0.34
VIPAS39-201ENST00000327028 CCDC136Q96JN2 1154 aa12.9□□□□□ -0.34
VIPAS39-201ENST00000327028 AK7Q96M32 723 aa12.9□□□□□ -0.34
VIPAS39-201ENST00000327028 NEURL1BA8MQ27 555 aa12.9□□□□□ -0.35
VIPAS39-201ENST00000327028 GNAI3P08754 354 aa12.9□□□□□ -0.35
VIPAS39-201ENST00000327028 CWF19L2Q2TBE0 894 aaKnown RBP12.9□□□□□ -0.35
VIPAS39-201ENST00000327028 GIGYF2Q6Y7W6 1299 aaKnown RBP12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 RTCBQ9Y3I0 505 aaKnown RBP12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 RGL2O15211 777 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 CAMTA2O94983 1202 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 HSP90AB3PQ58FF7 597 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 TBC1D2BQ9UPU7 963 aa12.89□□□□□ -0.35
VIPAS39-201ENST00000327028 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
VIPAS39-201ENST00000327028 ARXQ96QS3 562 aa12.88□□□□□ -0.35
VIPAS39-201ENST00000327028 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
VIPAS39-201ENST00000327028 PCDHB15Q9Y5E8 787 aa12.88□□□□□ -0.35
VIPAS39-201ENST00000327028 UTYO14607 1347 aa12.88□□□□□ -0.35
VIPAS39-201ENST00000327028 TUBGCP6Q96RT7 1819 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 UBTFL1P0CB47 393 aaPredicted RBP12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 ADRA2BP18089 450 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 GCKRQ14397 625 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 HLFQ16534 295 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 ATP5J2-PTCD1G3V325 749 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 GRM8O00222 908 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 GNAI2P04899 355 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 TRIM28Q13263 835 aaKnown RBP12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
VIPAS39-201ENST00000327028 CWC25Q9NXE8 425 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 SSFA2P28290 1259 aa12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 BAG6P46379 1132 aa12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 AMIGO3Q86WK7 504 aa12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 ZNF652Q9Y2D9 606 aa12.86□□□□□ -0.35
VIPAS39-201ENST00000327028 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 NARFQ9UHQ1 456 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 HDAC5Q9UQL6 1122 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 NBPF7P0C2Y1 421 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 HDAC1Q13547 482 aaPredicted RBP12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 ARHGEF1Q92888 912 aaKnown RBP12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 QSER1Q2KHR3 1735 aa12.85□□□□□ -0.35
VIPAS39-201ENST00000327028 ZNF827Q17R98 1081 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 TRAPPC3LQ5T215 181 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 SMIM5Q71RC9 77 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 PHF14O94880 888 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 RPAP2Q8IXW5 612 aaPredicted RBP12.84□□□□□ -0.35
VIPAS39-201ENST00000327028 ANKRD44Q8N8A2 993 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms