RNA–Protein interactions for RNA: ENST00000324953.9

CD164-203, Transcript of CD164 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD164, Length 2,936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD164-203ENST00000324953 PTPRMP28827 1452 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 LRRCC1Q9C099 1032 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 L2HGDHQ9H9P8 463 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 EFCC1Q9HA90 598 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 CCZ1BP86790 482 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
CD164-203ENST00000324953 CKAP2LQ8IYA6 745 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 GTF3C6Q969F1 213 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 TNMDQ9H2S6 317 aa11.28□□□□□ -0.6
CD164-203ENST00000324953 CRYBG1Q9Y4K1 1723 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 PNMA6AP0CW24 399 aaPredicted RBP11.27□□□□□ -0.6
CD164-203ENST00000324953 CLCN6P51797 869 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 ST3GAL1Q11201 340 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 ARID5BQ14865 1188 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.6
CD164-203ENST00000324953 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.6
CD164-203ENST00000324953 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.6
CD164-203ENST00000324953 CLSTN2Q9H4D0 955 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 HYPKQ9NX55 129 aa11.27□□□□□ -0.6
CD164-203ENST00000324953 RASEFQ8IZ41 740 aa11.27□□□□□ -0.61
CD164-203ENST00000324953 CCAR2Q8N163 923 aaKnown RBP11.27□□□□□ -0.61
CD164-203ENST00000324953 MRFAP1L1Q96HT8 127 aa11.27□□□□□ -0.61
CD164-203ENST00000324953 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.61
CD164-203ENST00000324953 CHD2O14647 1828 aaKnown RBP11.27□□□□□ -0.61
CD164-203ENST00000324953 MYO5BQ9ULV0 1848 aa11.27□□□□□ -0.61
CD164-203ENST00000324953 ZRANB2O95218 330 aaKnown RBP eCLIP11.26□□□□□ -0.619e-6■□□□□ 10.3
CD164-203ENST00000324953 FBLN1P23142 703 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 SAFB2Q14151 953 aaKnown RBP eCLIP11.26□□□□□ -0.61
CD164-203ENST00000324953 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 YTHDC2Q9H6S0 1430 aaKnown RBP11.26□□□□□ -0.61
CD164-203ENST00000324953 DACT1Q9NYF0 836 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 HAP1P54257 671 aaPredicted RBP11.26□□□□□ -0.61
CD164-203ENST00000324953 KRT85P78386 507 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 DCTN1Q14203 1278 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 CCDC83Q8IWF9 413 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 UBXN6Q9BZV1 441 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 YY1AP1Q9H869 796 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 DDX19AQ9NUU7 478 aaKnown RBP11.26□□□□□ -0.61
CD164-203ENST00000324953 ADGRL3Q9HAR2 1447 aa11.26□□□□□ -0.61
CD164-203ENST00000324953 SGSM2O43147 1006 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 SKILP12757 684 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 ZNF165P49910 485 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 RGS22Q8NE09 1264 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 KIF2AO00139 706 aaPredicted RBP11.25□□□□□ -0.61
CD164-203ENST00000324953 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
CD164-203ENST00000324953 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
CD164-203ENST00000324953 IQCB1Q15051 598 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 ERCC6LQ2NKX8 1250 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 TXLNBQ8N3L3 684 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 LRRN4CLQ8ND94 238 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 DNAJC25Q9H1X3 360 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 HDGFL2Q7Z4V5 671 aaPredicted RBP11.25□□□□□ -0.61
CD164-203ENST00000324953 NEK11Q8NG66 645 aa11.25□□□□□ -0.61
CD164-203ENST00000324953 HTATSF1O43719 755 aaKnown RBP11.24□□□□□ -0.61
CD164-203ENST00000324953 CAVIN2O95810 425 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 CHMP3Q9Y3E7 222 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 N4BP2Q86UW6 1770 aaPredicted RBP11.24□□□□□ -0.61
CD164-203ENST00000324953 VPS37CA5D8V6 355 aaPredicted RBP11.24□□□□□ -0.61
CD164-203ENST00000324953 CCDC69A6NI79 296 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 CHL1O00533 1208 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 GNAI2P04899 355 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
CD164-203ENST00000324953 TEX2Q8IWB9 1127 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 RASSF4Q9H2L5 321 aa11.24□□□□□ -0.61
CD164-203ENST00000324953 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
CD164-203ENST00000324953 PNMA6EA0A0J9YXQ4 647 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 DTNBO60941 627 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 CPA1P15085 419 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 VPS53Q5VIR6 699 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 SYT10Q6XYQ8 523 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 ZSCAN31Q96LW9 406 aaPredicted RBP11.23□□□□□ -0.61
CD164-203ENST00000324953 TRMT1Q9NXH9 659 aaKnown RBP11.23□□□□□ -0.61
CD164-203ENST00000324953 XRN1Q8IZH2 1706 aaKnown RBP11.23□□□□□ -0.61
CD164-203ENST00000324953 TEX35Q5T0J7 233 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 ATG3Q9NT62 314 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 STK26Q9P289 416 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 RSPH14Q9UHP6 348 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 NPHP3Q7Z494 1330 aa11.23□□□□□ -0.61
CD164-203ENST00000324953 ALKQ9UM73 1620 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
CD164-203ENST00000324953 EMILIN1Q9Y6C2 1016 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 RIMBP3CA6NJZ7 1639 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 RIMBP3BA6NNM3 1639 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 RIMBP3Q9UFD9 1639 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 NPHP1O15259 732 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 NR1I2O75469 434 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 TPM4P67936 248 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 ATP8B2P98198 1209 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 KRBA2Q6ZNG9 492 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 SMARCE1Q969G3 411 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 PRAM1Q96QH2 718 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 ATP7BP35670 1465 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 ST5P78524 1137 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 ME3Q16798 604 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 FAM173BQ6P4H8 233 aa11.22□□□□□ -0.61
CD164-203ENST00000324953 PI4K2BQ8TCG2 481 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms