RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 HLFQ16534 295 aa19.33■□□□□ 0.69
PRPF3-201ENST00000324862 COL5A3P25940 1745 aaPredicted RBP19.33■□□□□ 0.68
PRPF3-201ENST00000324862 IGKV5-2P06315 115 aa19.33■□□□□ 0.68
PRPF3-201ENST00000324862 DEFB132Q7Z7B7 95 aa19.32■□□□□ 0.68
PRPF3-201ENST00000324862 PLBD2Q8NHP8 589 aa19.32■□□□□ 0.68
PRPF3-201ENST00000324862 PLSCR1O15162 318 aa19.32■□□□□ 0.68
PRPF3-201ENST00000324862 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
PRPF3-201ENST00000324862 PCDHB15Q9Y5E8 787 aa19.32■□□□□ 0.68
PRPF3-201ENST00000324862 PHF14O94880 888 aa19.31■□□□□ 0.68
PRPF3-201ENST00000324862 CCT4P50991 539 aaKnown RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 EZH2Q15910 746 aaKnown RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 JARID2Q92833 1246 aaPredicted RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 SRCIN1Q9C0H9 1055 aa19.31■□□□□ 0.68
PRPF3-201ENST00000324862 ZBTB40Q9NUA8 1239 aa19.31■□□□□ 0.68
PRPF3-201ENST00000324862 CNTNAP4Q9C0A0 1308 aa19.31■□□□□ 0.68
PRPF3-201ENST00000324862 CICQ96RK0 1608 aaPredicted RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 METTL22Q9BUU2 404 aaPredicted RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 TNS1Q9HBL0 1735 aaKnown RBP19.31■□□□□ 0.68
PRPF3-201ENST00000324862 PPP4R2Q9NY27 417 aa19.3■□□□□ 0.68
PRPF3-201ENST00000324862 COL15A1P39059 1388 aa19.3■□□□□ 0.68
PRPF3-201ENST00000324862 NBPF7P0C2Y1 421 aaPredicted RBP19.29■□□□□ 0.68
PRPF3-201ENST00000324862 SLC27A3Q5K4L6 730 aa19.29■□□□□ 0.68
PRPF3-201ENST00000324862 KIF6Q6ZMV9 814 aa19.29■□□□□ 0.68
PRPF3-201ENST00000324862 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
PRPF3-201ENST00000324862 USP44Q9H0E7 712 aa19.29■□□□□ 0.68
PRPF3-201ENST00000324862 ZNF831Q5JPB2 1677 aa19.29■□□□□ 0.68
PRPF3-201ENST00000324862 MAP3K15Q6ZN16 1313 aa19.29■□□□□ 0.68
PRPF3-201ENST00000324862 ERICH6BQ5W0A0 696 aa19.28■□□□□ 0.68
PRPF3-201ENST00000324862 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
PRPF3-201ENST00000324862 NEURL1BA8MQ27 555 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 ZNF827Q17R98 1081 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 RTL5Q5HYW3 569 aaPredicted RBP19.27■□□□□ 0.68
PRPF3-201ENST00000324862 RC3H1Q5TC82 1133 aaKnown RBP19.27■□□□□ 0.68
PRPF3-201ENST00000324862 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 AK7Q96M32 723 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 SRP68Q9UHB9 627 aaKnown RBP19.27■□□□□ 0.68
PRPF3-201ENST00000324862 TAF1LQ8IZX4 1826 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 RREB1Q92766 1687 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 PXDNLA1KZ92 1463 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 RPS6KA4O75676 772 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 GPTP24298 496 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 LINS1Q8NG48 757 aa19.27■□□□□ 0.68
PRPF3-201ENST00000324862 CAMKK2Q96RR4 588 aa19.26■□□□□ 0.67
PRPF3-201ENST00000324862 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
PRPF3-201ENST00000324862 ATP10DQ9P241 1426 aa19.26■□□□□ 0.67
PRPF3-201ENST00000324862 ARFGEF2Q9Y6D5 1785 aa19.26■□□□□ 0.67
PRPF3-201ENST00000324862 CAMTA2O94983 1202 aa19.26■□□□□ 0.67
PRPF3-201ENST00000324862 NEXNQ0ZGT2 675 aa19.26■□□□□ 0.67
PRPF3-201ENST00000324862 ARHGEF1Q92888 912 aaKnown RBP19.25■□□□□ 0.67
PRPF3-201ENST00000324862 GIGYF2Q6Y7W6 1299 aaKnown RBP19.25■□□□□ 0.67
PRPF3-201ENST00000324862 IGHDP01880 384 aa19.24■□□□□ 0.67
PRPF3-201ENST00000324862 NUP188Q5SRE5 1749 aa19.24■□□□□ 0.67
PRPF3-201ENST00000324862 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.24■□□□□ 0.67
PRPF3-201ENST00000324862 TCIRG1Q13488 830 aa19.24■□□□□ 0.67
PRPF3-201ENST00000324862 GCKRQ14397 625 aa19.24■□□□□ 0.67
PRPF3-201ENST00000324862 USPL1Q5W0Q7 1092 aa19.23■□□□□ 0.67
PRPF3-201ENST00000324862 C9orf78Q9NZ63 289 aaPredicted RBP19.23■□□□□ 0.67
PRPF3-201ENST00000324862 SF3B2Q13435 895 aaKnown RBP19.23■□□□□ 0.67
PRPF3-201ENST00000324862 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
PRPF3-201ENST00000324862 LRRFIP2Q9Y608 721 aaKnown RBP19.23■□□□□ 0.67
PRPF3-201ENST00000324862 ALDH1L1O75891 902 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 SIRT2Q8IXJ6 389 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 BCL2L12Q9HB09 334 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 FAM177BA6PVY3 158 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 ISCA1Q9BUE6 129 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 UBN2Q6ZU65 1347 aa19.22■□□□□ 0.67
PRPF3-201ENST00000324862 GRM8O00222 908 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 TRAPPC3LQ5T215 181 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 A0A087WZG4 1122 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 ERVV-1B6SEH8 477 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 UBTFL1P0CB47 393 aaPredicted RBP19.21■□□□□ 0.67
PRPF3-201ENST00000324862 BICDL1Q6ZP65 573 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 AKT1S1Q96B36 256 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 TFCP2L1Q9NZI6 479 aa19.21■□□□□ 0.67
PRPF3-201ENST00000324862 BAG6P46379 1132 aa19.2■□□□□ 0.66
PRPF3-201ENST00000324862 SKAP1Q86WV1 359 aa19.2■□□□□ 0.66
PRPF3-201ENST00000324862 KAZALD1Q96I82 304 aa19.2■□□□□ 0.66
PRPF3-201ENST00000324862 SUCLG2Q96I99 432 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 CWC25Q9NXE8 425 aaPredicted RBP19.19■□□□□ 0.66
PRPF3-201ENST00000324862 NARFQ9UHQ1 456 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 GNAI2P04899 355 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 GNAI3P08754 354 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 RFC4P35249 363 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 NLRP10Q86W26 655 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 FAM89AQ96GI7 184 aa19.19■□□□□ 0.66
PRPF3-201ENST00000324862 N4BP2Q86UW6 1770 aaPredicted RBP19.18■□□□□ 0.66
PRPF3-201ENST00000324862 EPHA10Q5JZY3 1008 aa19.18■□□□□ 0.66
PRPF3-201ENST00000324862 CEP85Q6P2H3 762 aa19.18■□□□□ 0.66
PRPF3-201ENST00000324862 ZPR1O75312 459 aa19.17■□□□□ 0.66
PRPF3-201ENST00000324862 TBC1D9BQ66K14 1250 aa19.17■□□□□ 0.66
PRPF3-201ENST00000324862 ZNF34Q8IZ26 560 aa19.17■□□□□ 0.66
PRPF3-201ENST00000324862 NIP7Q9Y221 180 aaKnown RBP eCLIP19.17■□□□□ 0.66
PRPF3-201ENST00000324862 USP42Q9H9J4 1324 aaKnown RBP19.17■□□□□ 0.66
PRPF3-201ENST00000324862 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
PRPF3-201ENST00000324862 PNMA6EA0A0J9YXQ4 647 aa19.16■□□□□ 0.66
PRPF3-201ENST00000324862 CASP7P55210 303 aa19.16■□□□□ 0.66
PRPF3-201ENST00000324862 SUSD4Q5VX71 490 aa19.16■□□□□ 0.66
PRPF3-201ENST00000324862 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms