RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 TBC1D9Q6ZT07 1266 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 CCT2P78371 535 aaKnown RBP8.58□□□□□ -1.04
PSEN1-201ENST00000324501 NLRP1Q9C000 1473 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 FERMT3Q86UX7 667 aa8.58□□□□□ -1.04
PSEN1-201ENST00000324501 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
PSEN1-201ENST00000324501 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
PSEN1-201ENST00000324501 KDM5DQ9BY66 1539 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 KINO60870 393 aaKnown RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 SMC2O95347 1197 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 TTLL5Q6EMB2 1281 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 CDC5LQ99459 802 aaKnown RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 GRM8O00222 908 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 VAMP4O75379 141 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 EPS15P42566 896 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 KSR2Q6VAB6 950 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 SLAIN2Q9P270 581 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 HECW2Q9P2P5 1572 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 PDCP20941 246 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 STK32BQ9NY57 414 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 A0A0U1RQG5 324 aaPredicted RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 ZNF213O14771 459 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 TTC22Q5TAA0 569 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 UTP14AQ9BVJ6 771 aaKnown RBP8.57□□□□□ -1.04
PSEN1-201ENST00000324501 TSPY26PQ9H489 355 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 TFCP2L1Q9NZI6 479 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
PSEN1-201ENST00000324501 CCDC24Q8N4L8 307 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 ECHDC1Q9NTX5 307 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 U3KPZ7 1027 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-201ENST00000324501 HOMER1Q86YM7 354 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 PIK3C2GO75747 1445 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 SBNO1A3KN83 1393 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 NUCB1Q02818 461 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 SPC24Q8NBT2 197 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 GNPATO15228 680 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 KRT32Q14532 448 aa8.56□□□□□ -1.04
PSEN1-201ENST00000324501 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
PSEN1-201ENST00000324501 WDR33Q9C0J8 1336 aaKnown RBP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 NASPP49321 788 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 CAMK4Q16566 473 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 SPATA32Q96LK8 384 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 ANKRD18AQ8IVF6 992 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 SSBP05455 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 ZNF76P36508 570 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 TXLNAP40222 546 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 CCDC96Q2M329 555 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 EFCAB6Q5THR3 1501 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 IBSPP21815 317 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 TFCP2Q12800 502 aa8.55□□□□□ -1.04
PSEN1-201ENST00000324501 NAT10Q9H0A0 1025 aaKnown RBP8.55□□□□□ -1.04
PSEN1-201ENST00000324501 ZNF444Q8N0Y2 327 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 ZSCAN31Q96LW9 406 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 TNMDQ9H2S6 317 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 RTCBQ9Y3I0 505 aaKnown RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 IRS4O14654 1257 aaPredicted RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 CDKL5O76039 1030 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 SDSP20132 328 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 PRIM1P49642 420 aaKnown RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 TRIM5Q9C035 493 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 VAT1LQ9HCJ6 419 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 IFIT3O14879 490 aaKnown RBP8.54□□□□□ -1.04
PSEN1-201ENST00000324501 CHMP4BP1P59074 171 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 SLC12A7Q9Y666 1083 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 PTPRTO14522 1441 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 PICALMQ13492 652 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 FLAD1Q8NFF5 587 aa8.54□□□□□ -1.04
PSEN1-201ENST00000324501 GOLGA8BA8MQT2 603 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 ATP8B2P98198 1209 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 CDC42BPAQ5VT25 1732 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 A1BGP04217 495 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 KRT85P78386 507 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 ZNF790Q6PG37 636 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 USP21Q9UK80 565 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 ARAP3Q8WWN8 1544 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 NOL7Q9UMY1 257 aaKnown RBP8.53□□□□□ -1.04
PSEN1-201ENST00000324501 KCNQ3O43525 872 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 CEP85Q6P2H3 762 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 FAM89AQ96GI7 184 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 TCEANC2Q96MN5 208 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 SEC63Q9UGP8 760 aaKnown RBP8.53□□□□□ -1.04
PSEN1-201ENST00000324501 NPHP4O75161 1426 aaPredicted RBP8.53□□□□□ -1.04
PSEN1-201ENST00000324501 ATP2B3Q16720 1220 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 ARHGAP45Q92619 1136 aa8.53□□□□□ -1.04
PSEN1-201ENST00000324501 GOLGA8AA7E2F4 631 aa8.52□□□□□ -1.05
PSEN1-201ENST00000324501 IPO7O95373 1038 aaKnown RBP8.52□□□□□ -1.05
PSEN1-201ENST00000324501 CYP7A1P22680 504 aa8.52□□□□□ -1.05
PSEN1-201ENST00000324501 CCNL1Q9UK58 526 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms