RNA–Protein interactions for RNA: ENST00000324142.4

PCNX2-202, Transcript of pecanex 2, humanhuman

TSL 2

Gene PCNX2, Length 1,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-202ENST00000324142 SCN11AQ9UI33 1791 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 C1orf167Q5SNV9 1468 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 CLASRPQ8N2M8 674 aaKnown RBP11.34□□□□□ -0.59
PCNX2-202ENST00000324142 KCNB2Q92953 911 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
PCNX2-202ENST00000324142 DDX21Q9NR30 783 aaKnown RBP eCLIP11.34□□□□□ -0.59
PCNX2-202ENST00000324142 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 AXIN2Q9Y2T1 843 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 RGPD5Q99666 1765 aa11.34□□□□□ -0.59
PCNX2-202ENST00000324142 ERBB3P21860 1342 aa11.33□□□□□ -0.59
PCNX2-202ENST00000324142 ERBB4Q15303 1308 aa11.33□□□□□ -0.59
PCNX2-202ENST00000324142 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
PCNX2-202ENST00000324142 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
PCNX2-202ENST00000324142 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
PCNX2-202ENST00000324142 MRC1P22897 1456 aa11.33□□□□□ -0.6
PCNX2-202ENST00000324142 GRM8O00222 908 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 DDX58O95786 925 aaKnown RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 MAP4K4O95819 1239 aaPredicted RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 NCLP19338 710 aaKnown RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 PDIA6Q15084 440 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 GPATCH3Q96I76 525 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 C5P01031 1676 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 LRSAM1Q6UWE0 723 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 ANP32BQ92688 251 aaKnown RBP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 KAZALD1Q96I82 304 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCNX2-202ENST00000324142 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 COL18A1P39060 1754 aa11.32□□□□□ -0.6
PCNX2-202ENST00000324142 KDM6AO15550 1401 aaPredicted RBP11.31□□□□□ -0.6
PCNX2-202ENST00000324142 RPAP1Q9BWH6 1393 aaPredicted RBP11.31□□□□□ -0.6
PCNX2-202ENST00000324142 PRAMEF22A3QJZ6 481 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
PCNX2-202ENST00000324142 XPCQ01831 940 aaPredicted RBP11.31□□□□□ -0.6
PCNX2-202ENST00000324142 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
PCNX2-202ENST00000324142 HS1BP3Q53T59 392 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 RASEFQ8IZ41 740 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 PDLIM2Q96JY6 352 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 RBSNQ9H1K0 784 aa11.31□□□□□ -0.6
PCNX2-202ENST00000324142 SUCLG2Q96I99 432 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 CHAMP1Q96JM3 812 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 DIAPH3Q9NSV4 1193 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 RBM27Q9P2N5 1060 aaKnown RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 NSFL1CQ9UNZ2 370 aaKnown RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 LIMCH1Q9UPQ0 1083 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 SASH1O94885 1247 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 IFIT2P09913 472 aaKnown RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 TRHP20396 242 aaPredicted RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 AK2P54819 239 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 ZNF790Q6PG37 636 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 CWC27Q6UX04 472 aaKnown RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 RUFY3Q7L099 469 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 C19orf44Q9H6X5 657 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 SLC52A2Q9HAB3 445 aa11.3□□□□□ -0.6
PCNX2-202ENST00000324142 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
PCNX2-202ENST00000324142 NPHP3Q7Z494 1330 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 COL15A1P39059 1388 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 DCAF8L1A6NGE4 600 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 HIP1O00291 1037 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 VPS53Q5VIR6 699 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 NOL8Q76FK4 1167 aaKnown RBP11.29□□□□□ -0.6
PCNX2-202ENST00000324142 BICC1Q9H694 974 aaKnown RBP11.29□□□□□ -0.6
PCNX2-202ENST00000324142 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 PA2G4Q9UQ80 394 aaKnown RBP11.29□□□□□ -0.6
PCNX2-202ENST00000324142 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 DCCP43146 1447 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
PCNX2-202ENST00000324142 PHKG2P15735 406 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 AACSQ86V21 672 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 SYAP1Q96A49 352 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 NEURL1BA8MQ27 555 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 PTH1RQ03431 593 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 LMOD2Q6P5Q4 547 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 LRP10Q7Z4F1 713 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 RAPGEF4Q8WZA2 1011 aa11.28□□□□□ -0.6
PCNX2-202ENST00000324142 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 ZSCAN31Q96LW9 406 aaPredicted RBP11.28□□□□□ -0.6
PCNX2-202ENST00000324142 CCDC171Q6TFL3 1326 aa11.27□□□□□ -0.6
PCNX2-202ENST00000324142 MEGF6O75095 1541 aa11.27□□□□□ -0.6
PCNX2-202ENST00000324142 JCADQ9P266 1359 aa11.27□□□□□ -0.6
PCNX2-202ENST00000324142 SYCE3A1L190 88 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms