RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 NEXNQ0ZGT2 675 aa39.29■■■■□ 3.88
NECTIN3-201ENST00000319792 CEP85Q6P2H3 762 aa39.29■■■■□ 3.88
NECTIN3-201ENST00000319792 TTLL7Q6ZT98 887 aa39.29■■■■□ 3.88
NECTIN3-201ENST00000319792 KRT27Q7Z3Y8 459 aa39.29■■■■□ 3.88
NECTIN3-201ENST00000319792 SMC5Q8IY18 1101 aa39.28■■■■□ 3.88
NECTIN3-201ENST00000319792 MYH14Q7Z406 1995 aaKnown RBP39.28■■■■□ 3.88
NECTIN3-201ENST00000319792 ITPK1Q13572 414 aa39.27■■■■□ 3.88
NECTIN3-201ENST00000319792 IGKV5-2P06315 115 aa39.26■■■■□ 3.88
NECTIN3-201ENST00000319792 UBTFL1P0CB47 393 aaPredicted RBP39.26■■■■□ 3.88
NECTIN3-201ENST00000319792 ZBTB1Q9Y2K1 713 aa39.25■■■■□ 3.87
NECTIN3-201ENST00000319792 CWF19L2Q2TBE0 894 aaKnown RBP39.24■■■■□ 3.87
NECTIN3-201ENST00000319792 FAM196AQ6ZSG2 479 aa39.24■■■■□ 3.87
NECTIN3-201ENST00000319792 MYD88Q99836 296 aa39.24■■■■□ 3.87
NECTIN3-201ENST00000319792 UTYO14607 1347 aa39.24■■■■□ 3.87
NECTIN3-201ENST00000319792 NEURL1BA8MQ27 555 aa39.23■■■■□ 3.87
NECTIN3-201ENST00000319792 IL6STP40189 918 aaPredicted RBP39.23■■■■□ 3.87
NECTIN3-201ENST00000319792 CCDC87Q9NVE4 849 aa39.23■■■■□ 3.87
NECTIN3-201ENST00000319792 BCL11BQ9C0K0 894 aaPredicted RBP39.22■■■■□ 3.87
NECTIN3-201ENST00000319792 INTS5Q6P9B9 1019 aaKnown RBP39.21■■■■□ 3.87
NECTIN3-201ENST00000319792 NBPF7P0C2Y1 421 aaPredicted RBP39.2■■■■□ 3.87
NECTIN3-201ENST00000319792 CRKLP46109 303 aaKnown RBP39.2■■■■□ 3.87
NECTIN3-201ENST00000319792 LRRFIP2Q9Y608 721 aaKnown RBP39.2■■■■□ 3.87
NECTIN3-201ENST00000319792 GCC1Q96CN9 775 aa39.19■■■■□ 3.86
NECTIN3-201ENST00000319792 TAF1LQ8IZX4 1826 aa39.19■■■■□ 3.86
NECTIN3-201ENST00000319792 RXRBP28702 533 aa39.19■■■■□ 3.86
NECTIN3-201ENST00000319792 RGS17Q9UGC6 210 aaPredicted RBP39.19■■■■□ 3.86
NECTIN3-201ENST00000319792 ANKRD36CQ5JPF3 1778 aa39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 GRM8O00222 908 aa39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 GCKRQ14397 625 aa39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 KIF6Q6ZMV9 814 aa39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 C9orf78Q9NZ63 289 aaPredicted RBP39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 HDAC5Q9UQL6 1122 aa39.18■■■■□ 3.86
NECTIN3-201ENST00000319792 HMMRO75330 724 aa39.16■■■■□ 3.86
NECTIN3-201ENST00000319792 EIF5P55010 431 aaKnown RBP39.16■■■■□ 3.86
NECTIN3-201ENST00000319792 ZBTB3Q9H5J0 574 aa39.16■■■■□ 3.86
NECTIN3-201ENST00000319792 PDZRN3Q9UPQ7 1066 aa39.16■■■■□ 3.86
NECTIN3-201ENST00000319792 MAP3K15Q6ZN16 1313 aa39.16■■■■□ 3.86
NECTIN3-201ENST00000319792 NUP98P52948 1817 aa39.15■■■■□ 3.86
NECTIN3-201ENST00000319792 ATP8B2P98198 1209 aa39.14■■■■□ 3.86
NECTIN3-201ENST00000319792 ZNF330Q9Y3S2 320 aaPredicted RBP39.14■■■■□ 3.86
NECTIN3-201ENST00000319792 SKAP1Q86WV1 359 aa39.14■■■■□ 3.86
NECTIN3-201ENST00000319792 DCTPP1Q9H773 170 aa39.14■■■■□ 3.86
NECTIN3-201ENST00000319792 CNTNAP4Q9C0A0 1308 aa39.13■■■■□ 3.85
NECTIN3-201ENST00000319792 LINC00116Q8NCU8 138 aa39.13■■■■□ 3.85
NECTIN3-201ENST00000319792 COL15A1P39059 1388 aa39.1■■■■□ 3.85
NECTIN3-201ENST00000319792 ATP5J2-PTCD1G3V325 749 aa39.09■■■■□ 3.85
NECTIN3-201ENST00000319792 ISCA1Q9BUE6 129 aa39.09■■■■□ 3.85
NECTIN3-201ENST00000319792 ERVV-1B6SEH8 477 aa39.09■■■■□ 3.85
NECTIN3-201ENST00000319792 NUCB1Q02818 461 aa39.09■■■■□ 3.85
NECTIN3-201ENST00000319792 TCIRG1Q13488 830 aa39.09■■■■□ 3.85
NECTIN3-201ENST00000319792 TRIM28Q13263 835 aaKnown RBP39.08■■■■□ 3.85
NECTIN3-201ENST00000319792 MTX1Q13505 466 aa39.08■■■■□ 3.85
NECTIN3-201ENST00000319792 GIGYF2Q6Y7W6 1299 aaKnown RBP39.08■■■■□ 3.85
NECTIN3-201ENST00000319792 CCDC191Q8NCU4 936 aa39.08■■■■□ 3.85
NECTIN3-201ENST00000319792 CCNL1Q9UK58 526 aaPredicted RBP39.08■■■■□ 3.85
NECTIN3-201ENST00000319792 RC3H1Q5TC82 1133 aaKnown RBP39.07■■■■□ 3.84
NECTIN3-201ENST00000319792 BCORQ6W2J9 1755 aa39.07■■■■□ 3.84
NECTIN3-201ENST00000319792 PNMA6EA0A0J9YXQ4 647 aa39.06■■■■□ 3.84
NECTIN3-201ENST00000319792 POTEAQ6S8J7 498 aa39.06■■■■□ 3.84
NECTIN3-201ENST00000319792 NPM2Q86SE8 214 aaKnown RBP39.06■■■■□ 3.84
NECTIN3-201ENST00000319792 DZIP3Q86Y13 1208 aaKnown RBP39.06■■■■□ 3.84
NECTIN3-201ENST00000319792 CWC25Q9NXE8 425 aaPredicted RBP39.06■■■■□ 3.84
NECTIN3-201ENST00000319792 SSH3Q8TE77 659 aa39.05■■■■□ 3.84
NECTIN3-201ENST00000319792 HSP90AB3PQ58FF7 597 aa39.04■■■■□ 3.84
NECTIN3-201ENST00000319792 POLA2Q14181 598 aa39.04■■■■□ 3.84
NECTIN3-201ENST00000319792 KAZALD1Q96I82 304 aa39.04■■■■□ 3.84
NECTIN3-201ENST00000319792 SUCLG2Q96I99 432 aa39.04■■■■□ 3.84
NECTIN3-201ENST00000319792 C4BP0C0L5 1744 aa39.02■■■■□ 3.84
NECTIN3-201ENST00000319792 CASP7P55210 303 aa39.02■■■■□ 3.84
NECTIN3-201ENST00000319792 PPP1R42Q7Z4L9 355 aa39.02■■■■□ 3.84
NECTIN3-201ENST00000319792 A0A087WZG4 1122 aa39.01■■■■□ 3.84
NECTIN3-201ENST00000319792 H7C1W4 665 aa39.01■■■■□ 3.84
NECTIN3-201ENST00000319792 TRIM37O94972 964 aa39.01■■■■□ 3.84
NECTIN3-201ENST00000319792 KCNQ4P56696 695 aa39.01■■■■□ 3.84
NECTIN3-201ENST00000319792 RGS3P49796 1198 aa39■■■■□ 3.83
NECTIN3-201ENST00000319792 HLFQ16534 295 aa39■■■■□ 3.83
NECTIN3-201ENST00000319792 CHD1LQ86WJ1 897 aa39■■■■□ 3.83
NECTIN3-201ENST00000319792 TBC1D2BQ9UPU7 963 aa38.99■■■■□ 3.83
NECTIN3-201ENST00000319792 ARXQ96QS3 562 aa38.99■■■■□ 3.83
NECTIN3-201ENST00000319792 UBE3BQ7Z3V4 1068 aa38.98■■■■□ 3.83
NECTIN3-201ENST00000319792 SCN7AQ01118 1682 aa38.97■■■■□ 3.83
NECTIN3-201ENST00000319792 ANKRD45Q5TZF3 282 aa38.97■■■■□ 3.83
NECTIN3-201ENST00000319792 SRGAP3O43295 1099 aa38.96■■■■□ 3.83
NECTIN3-201ENST00000319792 CAMTA2O94983 1202 aa38.96■■■■□ 3.83
NECTIN3-201ENST00000319792 BICC1Q9H694 974 aaKnown RBP38.96■■■■□ 3.83
NECTIN3-201ENST00000319792 PDE4AP27815 886 aa38.95■■■■□ 3.83
NECTIN3-201ENST00000319792 RPS6KA4O75676 772 aa38.94■■■■□ 3.82
NECTIN3-201ENST00000319792 SLC27A3Q5K4L6 730 aa38.94■■■■□ 3.82
NECTIN3-201ENST00000319792 TNS1Q9HBL0 1735 aaKnown RBP38.93■■■■□ 3.82
NECTIN3-201ENST00000319792 RGL2O15211 777 aa38.93■■■■□ 3.82
NECTIN3-201ENST00000319792 LNPKQ9C0E8 428 aa38.93■■■■□ 3.82
NECTIN3-201ENST00000319792 RABL6Q3YEC7 729 aaPredicted RBP38.92■■■■□ 3.82
NECTIN3-201ENST00000319792 ZNF34Q8IZ26 560 aa38.92■■■■□ 3.82
NECTIN3-201ENST00000319792 EPHA10Q5JZY3 1008 aa38.91■■■■□ 3.82
NECTIN3-201ENST00000319792 NLRP10Q86W26 655 aa38.91■■■■□ 3.82
NECTIN3-201ENST00000319792 LRRC4BQ9NT99 713 aa38.9■■■■□ 3.82
NECTIN3-201ENST00000319792 PCCAP05165 728 aaPredicted RBP38.89■■■■□ 3.82
NECTIN3-201ENST00000319792 JARID2Q92833 1246 aaPredicted RBP38.89■■■■□ 3.82
NECTIN3-201ENST00000319792 RGPD3A6NKT7 1758 aaPredicted RBP38.89■■■■□ 3.82
NECTIN3-201ENST00000319792 RGPD4Q7Z3J3 1758 aa38.89■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms