RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 C16orf71Q8IYS4 520 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-201ENST00000319432 CEP126Q9P2H0 1117 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 BCAR3O75815 825 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 IQSEC3Q9UPP2 1182 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-201ENST00000319432 TAF3Q5VWG9 929 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 ZNF790Q6PG37 636 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 WASHC4Q2M389 1173 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
CCDC93-201ENST00000319432 AKAP17AQ02040 695 aaKnown RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 TRIM29Q14134 588 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 JDP2Q8WYK2 163 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 GJA3Q9Y6H8 435 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 ARHGEF40Q8TER5 1519 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 REC8O95072 547 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 BRD4O60885 1362 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 PPP1R42Q7Z4L9 355 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 CNBD1Q8NA66 436 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 SPATA31E1Q6ZUB1 1445 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 GTF2F1P35269 517 aaKnown RBP eCLIP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 TXNRD1Q16881 649 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 PUS7Q96PZ0 661 aaKnown RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 HCLS1P14317 486 aaPredicted RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 CCDC73Q6ZRK6 1079 aa8.59□□□□□ -1.03
CCDC93-201ENST00000319432 NOB1Q9ULX3 412 aaKnown RBP8.59□□□□□ -1.03
CCDC93-201ENST00000319432 SRGAP3O43295 1099 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 HMGN5P82970 282 aaKnown RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 METTL24Q5JXM2 366 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 CCAR1Q8IX12 1150 aaKnown RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 USP16Q9Y5T5 823 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 CDC42BPBQ9Y5S2 1711 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 IGSF3O75054 1194 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 OLFM4Q6UX06 510 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 NUTM1Q86Y26 1132 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 ZNF408Q9H9D4 720 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 F8W031 263 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 GNAI3P08754 354 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 LDHAL6AQ6ZMR3 332 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 KCNQ3O43525 872 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 ANKRD20A12PQ8NF67 263 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 DYDC1Q8WWB3 177 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 SYCE3A1L190 88 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 IFIT5Q13325 482 aaKnown RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 ERCC4Q92889 916 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 SBNO1A3KN83 1393 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 VGLL3A8MV65 326 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 MAP4K4O95819 1239 aaPredicted RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 EDC4Q6P2E9 1401 aaKnown RBP8.58□□□□□ -1.04
CCDC93-201ENST00000319432 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 SDF4Q9BRK5 362 aa8.58□□□□□ -1.04
CCDC93-201ENST00000319432 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 NFXL1Q6ZNB6 911 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 CLASRPQ8N2M8 674 aaKnown RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 MAP3K2Q9Y2U5 619 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 PTPRTO14522 1441 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 PHKG2P15735 406 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 STK3Q13188 491 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 DNAJC2Q99543 621 aaKnown RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 PIK3C2GO75747 1445 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 CLTCQ00610 1675 aaKnown RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 CPLX1O14810 134 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 TAX1BP1Q86VP1 789 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 DHX16O60231 1041 aaKnown RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 FKBP4Q02790 459 aaKnown RBP eCLIP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 ODF2Q5BJF6 829 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 ZC3H12CQ9C0D7 883 aaKnown RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 MBIPQ9NS73 344 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 CCDC87Q9NVE4 849 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 JAG2Q9Y219 1238 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 ZFYVE27Q5T4F4 411 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 BACH2Q9BYV9 841 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 PDCL3Q9H2J4 239 aa8.57□□□□□ -1.04
CCDC93-201ENST00000319432 CTDP1Q9Y5B0 961 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-201ENST00000319432 FLIIQ13045 1269 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 ENOX2Q16206 610 aaKnown RBP8.56□□□□□ -1.04
CCDC93-201ENST00000319432 CAMK4Q16566 473 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 NAT10Q9H0A0 1025 aaKnown RBP8.56□□□□□ -1.04
CCDC93-201ENST00000319432 SPON1Q9HCB6 807 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 IL1RAPL2Q9NP60 686 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
CCDC93-201ENST00000319432 DNAAF4Q8WXU2 420 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 ANKRD62A6NC57 917 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 ZKSCAN1P17029 563 aaPredicted RBP8.56□□□□□ -1.04
CCDC93-201ENST00000319432 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 AGLP35573 1532 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 H0YIN7 160 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 IL13P35225 146 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 ABCA6Q8N139 1617 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 MMP10P09238 476 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 VPS72Q15906 364 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 SSH1Q8WYL5 1049 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 PIGBQ92521 554 aa8.56□□□□□ -1.04
CCDC93-201ENST00000319432 DDX19BQ9UMR2 479 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms