RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 ANKRD31Q8N7Z5 1873 aa21.01■□□□□ 0.95
HDDC2-201ENST00000318787 ARFGEF1Q9Y6D6 1849 aa21.01■□□□□ 0.95
HDDC2-201ENST00000318787 NUP98P52948 1817 aa21■□□□□ 0.95
HDDC2-201ENST00000318787 DLEC1Q9Y238 1755 aa21■□□□□ 0.95
HDDC2-201ENST00000318787 PIM2Q9P1W9 311 aa20.99■□□□□ 0.95
HDDC2-201ENST00000318787 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
HDDC2-201ENST00000318787 KIF6Q6ZMV9 814 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 ARHGAP27Q6ZUM4 889 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 COL11A2P13942 1736 aaPredicted RBP20.97■□□□□ 0.95
HDDC2-201ENST00000318787 KCNA3P22001 575 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 KRT24Q2M2I5 525 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 DALRD3Q5D0E6 543 aaKnown RBP20.97■□□□□ 0.95
HDDC2-201ENST00000318787 CNBD1Q8NA66 436 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 BABAM1Q9NWV8 329 aa20.97■□□□□ 0.95
HDDC2-201ENST00000318787 NIP7Q9Y221 180 aaKnown RBP eCLIP20.97■□□□□ 0.95
HDDC2-201ENST00000318787 PRR5LQ6MZQ0 368 aa20.96■□□□□ 0.95
HDDC2-201ENST00000318787 C2CD5Q86YS7 1000 aa20.96■□□□□ 0.95
HDDC2-201ENST00000318787 ANXA1P04083 346 aa20.95■□□□□ 0.94
HDDC2-201ENST00000318787 ST5P78524 1137 aa20.95■□□□□ 0.94
HDDC2-201ENST00000318787 HLFQ16534 295 aa20.95■□□□□ 0.94
HDDC2-201ENST00000318787 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
HDDC2-201ENST00000318787 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
HDDC2-201ENST00000318787 H0YIN7 160 aa20.94■□□□□ 0.94
HDDC2-201ENST00000318787 CHL1O00533 1208 aa20.94■□□□□ 0.94
HDDC2-201ENST00000318787 CLEC4GQ6UXB4 293 aa20.94■□□□□ 0.94
HDDC2-201ENST00000318787 TTLL7Q6ZT98 887 aa20.94■□□□□ 0.94
HDDC2-201ENST00000318787 ZNF526Q8TF50 670 aaPredicted RBP20.93■□□□□ 0.94
HDDC2-201ENST00000318787 ZNF622Q969S3 477 aaKnown RBP eCLIP20.93■□□□□ 0.94
HDDC2-201ENST00000318787 MAP3K15Q6ZN16 1313 aa20.92■□□□□ 0.94
HDDC2-201ENST00000318787 GTF2E1P29083 439 aaPredicted RBP20.91■□□□□ 0.94
HDDC2-201ENST00000318787 PDE6BP35913 854 aa20.91■□□□□ 0.94
HDDC2-201ENST00000318787 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
HDDC2-201ENST00000318787 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
HDDC2-201ENST00000318787 CFAP44Q96MT7 982 aa20.91■□□□□ 0.94
HDDC2-201ENST00000318787 MBIPQ9NS73 344 aa20.91■□□□□ 0.94
HDDC2-201ENST00000318787 ERBB4Q15303 1308 aa20.91■□□□□ 0.94
HDDC2-201ENST00000318787 GPTP24298 496 aa20.9■□□□□ 0.94
HDDC2-201ENST00000318787 PROSER3Q2NL68 480 aa20.9■□□□□ 0.94
HDDC2-201ENST00000318787 BRIP1Q9BX63 1249 aa20.9■□□□□ 0.94
HDDC2-201ENST00000318787 ZNF219Q9P2Y4 722 aaPredicted RBP20.9■□□□□ 0.94
HDDC2-201ENST00000318787 SALL2Q9Y467 1007 aaPredicted RBP20.9■□□□□ 0.94
HDDC2-201ENST00000318787 ATP10DQ9P241 1426 aa20.9■□□□□ 0.94
HDDC2-201ENST00000318787 HDGFL1Q5TGJ6 251 aa20.89■□□□□ 0.93
HDDC2-201ENST00000318787 TTLL6Q8N841 843 aa20.89■□□□□ 0.93
HDDC2-201ENST00000318787 CCDC88AQ3V6T2 1871 aa20.89■□□□□ 0.93
HDDC2-201ENST00000318787 ANKRD36CQ5JPF3 1778 aa20.89■□□□□ 0.93
HDDC2-201ENST00000318787 GNAI1P63096 354 aa20.88■□□□□ 0.93
HDDC2-201ENST00000318787 FAM9BQ8IZU0 186 aa20.88■□□□□ 0.93
HDDC2-201ENST00000318787 ERVV-1B6SEH8 477 aa20.87■□□□□ 0.93
HDDC2-201ENST00000318787 ELL2O00472 640 aaPredicted RBP20.87■□□□□ 0.93
HDDC2-201ENST00000318787 TPTE2Q6XPS3 522 aa20.87■□□□□ 0.93
HDDC2-201ENST00000318787 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
HDDC2-201ENST00000318787 CHPF2Q9P2E5 772 aa20.87■□□□□ 0.93
HDDC2-201ENST00000318787 SBF1O95248 1867 aa20.86■□□□□ 0.93
HDDC2-201ENST00000318787 PDIA6Q15084 440 aa20.86■□□□□ 0.93
HDDC2-201ENST00000318787 DUSP27Q5VZP5 1158 aa20.86■□□□□ 0.93
HDDC2-201ENST00000318787 COPS6Q7L5N1 327 aa20.85■□□□□ 0.93
HDDC2-201ENST00000318787 NUTM1Q86Y26 1132 aa20.85■□□□□ 0.93
HDDC2-201ENST00000318787 XAGE3Q8WTP9 111 aa20.85■□□□□ 0.93
HDDC2-201ENST00000318787 TNRC6CQ9HCJ0 1690 aaKnown RBP20.85■□□□□ 0.93
HDDC2-201ENST00000318787 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
HDDC2-201ENST00000318787 NPM3O75607 178 aaKnown RBP20.85■□□□□ 0.93
HDDC2-201ENST00000318787 SLX4Q8IY92 1834 aa20.84■□□□□ 0.93
HDDC2-201ENST00000318787 RGL2O15211 777 aa20.84■□□□□ 0.93
HDDC2-201ENST00000318787 RASSF7Q02833 373 aa20.84■□□□□ 0.93
HDDC2-201ENST00000318787 GIGYF2Q6Y7W6 1299 aaKnown RBP20.84■□□□□ 0.93
HDDC2-201ENST00000318787 NYXQ9GZU5 481 aa20.84■□□□□ 0.93
HDDC2-201ENST00000318787 GPBP1L1Q9HC44 474 aaPredicted RBP20.84■□□□□ 0.93
HDDC2-201ENST00000318787 DDX21Q9NR30 783 aaKnown RBP eCLIP20.84■□□□□ 0.93
HDDC2-201ENST00000318787 PDZRN3Q9UPQ7 1066 aa20.84■□□□□ 0.93
HDDC2-201ENST00000318787 ZNF853P0CG23 659 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 C1QTNF8P60827 252 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 C9orf131Q5VYM1 1079 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 TSR2Q969E8 191 aaKnown RBP20.83■□□□□ 0.92
HDDC2-201ENST00000318787 RNF181Q9P0P0 153 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 UBN2Q6ZU65 1347 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 ADCY9O60503 1353 aa20.83■□□□□ 0.92
HDDC2-201ENST00000318787 C21orf2O43822 256 aa20.82■□□□□ 0.92
HDDC2-201ENST00000318787 HOXB7P09629 217 aa20.82■□□□□ 0.92
HDDC2-201ENST00000318787 LRP10Q7Z4F1 713 aa20.82■□□□□ 0.92
HDDC2-201ENST00000318787 ZNF428Q96B54 188 aa20.82■□□□□ 0.92
HDDC2-201ENST00000318787 MASTLQ96GX5 879 aa20.82■□□□□ 0.92
HDDC2-201ENST00000318787 SRGNP10124 158 aa20.81■□□□□ 0.92
HDDC2-201ENST00000318787 ERFEQ4G0M1 354 aa20.81■□□□□ 0.92
HDDC2-201ENST00000318787 SUSD4Q5VX71 490 aa20.81■□□□□ 0.92
HDDC2-201ENST00000318787 WWC1Q8IX03 1113 aa20.81■□□□□ 0.92
HDDC2-201ENST00000318787 ABCC12Q96J65 1359 aa20.81■□□□□ 0.92
HDDC2-201ENST00000318787 DBF4Q9UBU7 674 aaPredicted RBP20.81■□□□□ 0.92
HDDC2-201ENST00000318787 CNKSR1Q969H4 720 aa20.8■□□□□ 0.92
HDDC2-201ENST00000318787 TIAM2Q8IVF5 1701 aa20.79■□□□□ 0.92
HDDC2-201ENST00000318787 STYK1Q6J9G0 422 aa20.79■□□□□ 0.92
HDDC2-201ENST00000318787 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
HDDC2-201ENST00000318787 PPP1R42Q7Z4L9 355 aa20.79■□□□□ 0.92
HDDC2-201ENST00000318787 ZNF34Q8IZ26 560 aa20.79■□□□□ 0.92
HDDC2-201ENST00000318787 C8orf58Q8NAV2 365 aa20.79■□□□□ 0.92
HDDC2-201ENST00000318787 FER1L6Q2WGJ9 1857 aa20.78■□□□□ 0.92
HDDC2-201ENST00000318787 NPR1P16066 1061 aa20.77■□□□□ 0.92
HDDC2-201ENST00000318787 CCDC27Q2M243 656 aa20.77■□□□□ 0.92
HDDC2-201ENST00000318787 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
HDDC2-201ENST00000318787 PARP10Q53GL7 1025 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 777.7 ms