RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
SYCN-201ENST00000318438 CNKSR1Q969H4 720 aa18.14■□□□□ 0.49
SYCN-201ENST00000318438 DDX21Q9NR30 783 aaKnown RBP eCLIP18.14■□□□□ 0.49
SYCN-201ENST00000318438 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
SYCN-201ENST00000318438 PNMA8AQ86V59 439 aaPredicted RBP18.13■□□□□ 0.49
SYCN-201ENST00000318438 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
SYCN-201ENST00000318438 ECE1P42892 770 aa18.12■□□□□ 0.49
SYCN-201ENST00000318438 SOGA3Q5TF21 947 aa18.12■□□□□ 0.49
SYCN-201ENST00000318438 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
SYCN-201ENST00000318438 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
SYCN-201ENST00000318438 LTBP1Q14766 1721 aa18.12■□□□□ 0.49
SYCN-201ENST00000318438 AOC2O75106 756 aa18.11■□□□□ 0.49
SYCN-201ENST00000318438 SRGNP10124 158 aa18.11■□□□□ 0.49
SYCN-201ENST00000318438 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
SYCN-201ENST00000318438 LGR6Q9HBX8 967 aa18.1■□□□□ 0.49
SYCN-201ENST00000318438 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
SYCN-201ENST00000318438 DGKZQ13574 1117 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 OLFM4Q6UX06 510 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 C7orf43Q8WVR3 580 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 MASTLQ96GX5 879 aa18.09■□□□□ 0.49
SYCN-201ENST00000318438 NPHP1O15259 732 aa18.08■□□□□ 0.48
SYCN-201ENST00000318438 FKBP4Q02790 459 aaKnown RBP eCLIP18.08■□□□□ 0.48
SYCN-201ENST00000318438 TBC1D2BQ9UPU7 963 aa18.08■□□□□ 0.48
SYCN-201ENST00000318438 SCN11AQ9UI33 1791 aa18.08■□□□□ 0.48
SYCN-201ENST00000318438 A0A087WZG4 1122 aa18.07■□□□□ 0.48
SYCN-201ENST00000318438 TRAF5O00463 557 aa18.07■□□□□ 0.48
SYCN-201ENST00000318438 CST9Q5W186 159 aa18.07■□□□□ 0.48
SYCN-201ENST00000318438 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
SYCN-201ENST00000318438 ST5P78524 1137 aa18.06■□□□□ 0.48
SYCN-201ENST00000318438 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
SYCN-201ENST00000318438 TLL2Q9Y6L7 1015 aa18.06■□□□□ 0.48
SYCN-201ENST00000318438 SCN7AQ01118 1682 aa18.06■□□□□ 0.48
SYCN-201ENST00000318438 FZD9O00144 591 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 MAP2K2P36507 400 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 SOX10P56693 466 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 AKAP4Q5JQC9 854 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 VSIG10Q8N0Z9 540 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 GPC2Q8N158 579 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 MRC1P22897 1456 aa18.05■□□□□ 0.48
SYCN-201ENST00000318438 ARFGEF2Q9Y6D5 1785 aa18.04■□□□□ 0.48
SYCN-201ENST00000318438 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
SYCN-201ENST00000318438 CASP8AP2Q9UKL3 1982 aa18.04■□□□□ 0.48
SYCN-201ENST00000318438 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
SYCN-201ENST00000318438 CA12O43570 354 aa18.03■□□□□ 0.48
SYCN-201ENST00000318438 STARD3NLO95772 234 aa18.03■□□□□ 0.48
SYCN-201ENST00000318438 IARSP41252 1262 aaKnown RBP18.03■□□□□ 0.48
SYCN-201ENST00000318438 GJA3Q9Y6H8 435 aa18.03■□□□□ 0.48
SYCN-201ENST00000318438 PRPF38BQ5VTL8 546 aaKnown RBP18.02■□□□□ 0.48
SYCN-201ENST00000318438 EPS15P42566 896 aa18.01■□□□□ 0.47
SYCN-201ENST00000318438 CAMTA2O94983 1202 aa18■□□□□ 0.47
SYCN-201ENST00000318438 NPR1P16066 1061 aa18■□□□□ 0.47
SYCN-201ENST00000318438 LMOD1P29536 600 aaPredicted RBP18■□□□□ 0.47
SYCN-201ENST00000318438 RTKN2Q8IZC4 609 aa18■□□□□ 0.47
SYCN-201ENST00000318438 SYNE4Q8N205 404 aa18■□□□□ 0.47
SYCN-201ENST00000318438 SCNN1DP51172 638 aa17.99■□□□□ 0.47
SYCN-201ENST00000318438 BRPF1P55201 1214 aaPredicted RBP17.99■□□□□ 0.47
SYCN-201ENST00000318438 CIAPIN1Q6FI81 312 aa17.99■□□□□ 0.47
SYCN-201ENST00000318438 SAPCD2Q86UD0 394 aa17.99■□□□□ 0.47
SYCN-201ENST00000318438 COL4A5P29400 1685 aa17.97■□□□□ 0.47
SYCN-201ENST00000318438 NBPF5PQ86XG9 351 aaPredicted RBP17.97■□□□□ 0.47
SYCN-201ENST00000318438 JDP2Q8WYK2 163 aa17.97■□□□□ 0.47
SYCN-201ENST00000318438 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.47
SYCN-201ENST00000318438 CELF2O95319 508 aaKnown RBP17.96■□□□□ 0.47
SYCN-201ENST00000318438 IL6STP40189 918 aaPredicted RBP17.96■□□□□ 0.47
SYCN-201ENST00000318438 EIF6P56537 245 aaKnown RBP17.96■□□□□ 0.47
SYCN-201ENST00000318438 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
SYCN-201ENST00000318438 TTC5Q8N0Z6 440 aa17.96■□□□□ 0.47
SYCN-201ENST00000318438 ZNF496Q96IT1 587 aaPredicted RBP17.96■□□□□ 0.47
SYCN-201ENST00000318438 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
SYCN-201ENST00000318438 A1BGP04217 495 aa17.95■□□□□ 0.46
SYCN-201ENST00000318438 IL13P35225 146 aa17.95■□□□□ 0.46
SYCN-201ENST00000318438 USP50Q70EL3 339 aaPredicted RBP17.95■□□□□ 0.46
SYCN-201ENST00000318438 ZIC5Q96T25 663 aa17.95■□□□□ 0.46
SYCN-201ENST00000318438 KLRG2A4D1S0 409 aaPredicted RBP17.94■□□□□ 0.46
SYCN-201ENST00000318438 HEG1Q9ULI3 1381 aa17.93■□□□□ 0.46
SYCN-201ENST00000318438 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
SYCN-201ENST00000318438 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
SYCN-201ENST00000318438 DZIP3Q86Y13 1208 aaKnown RBP17.93■□□□□ 0.46
SYCN-201ENST00000318438 POLR3GLQ9BT43 218 aa17.93■□□□□ 0.46
SYCN-201ENST00000318438 BCORQ6W2J9 1755 aa17.92■□□□□ 0.46
SYCN-201ENST00000318438 HSPA5P11021 654 aaKnown RBP17.92■□□□□ 0.46
SYCN-201ENST00000318438 MTHFSDQ2M296 383 aaKnown RBP17.92■□□□□ 0.46
SYCN-201ENST00000318438 HHIPL1Q96JK4 782 aa17.92■□□□□ 0.46
SYCN-201ENST00000318438 PSMD1Q99460 953 aa17.92■□□□□ 0.46
SYCN-201ENST00000318438 GLIS2Q9BZE0 524 aaPredicted RBP17.92■□□□□ 0.46
SYCN-201ENST00000318438 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
SYCN-201ENST00000318438 HMOX1P09601 288 aa17.91■□□□□ 0.46
SYCN-201ENST00000318438 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
SYCN-201ENST00000318438 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
SYCN-201ENST00000318438 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
SYCN-201ENST00000318438 ZNF790Q6PG37 636 aa17.9■□□□□ 0.46
SYCN-201ENST00000318438 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
SYCN-201ENST00000318438 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
SYCN-201ENST00000318438 LARGE2Q8N3Y3 721 aa17.89■□□□□ 0.45
SYCN-201ENST00000318438 NOGQ13253 232 aa17.88■□□□□ 0.45
SYCN-201ENST00000318438 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
SYCN-201ENST00000318438 ADARB2Q9NS39 739 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms