RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 FANCAO15360 1455 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 SHTN1A0MZ66 631 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
EDEM3-201ENST00000318130 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 CCDC148Q8NFR7 591 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 CAMSAP2Q08AD1 1489 aa16.12■□□□□ 0.17
EDEM3-201ENST00000318130 NIP7Q9Y221 180 aaKnown RBP eCLIP16.12■□□□□ 0.17
EDEM3-201ENST00000318130 GPR162Q16538 588 aa16.11■□□□□ 0.17
EDEM3-201ENST00000318130 RPAP2Q8IXW5 612 aaPredicted RBP16.11■□□□□ 0.17
EDEM3-201ENST00000318130 NAPBQ9H115 298 aa16.11■□□□□ 0.17
EDEM3-201ENST00000318130 NOS1P29475 1434 aa16.11■□□□□ 0.17
EDEM3-201ENST00000318130 MAGI1Q96QZ7 1491 aaPredicted RBP16.11■□□□□ 0.17
EDEM3-201ENST00000318130 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
EDEM3-201ENST00000318130 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
EDEM3-201ENST00000318130 TRMT1Q9NXH9 659 aaKnown RBP16.11■□□□□ 0.17
EDEM3-201ENST00000318130 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
EDEM3-201ENST00000318130 IMMTQ16891 758 aaKnown RBP16.11■□□□□ 0.17
EDEM3-201ENST00000318130 CASQ1P31415 396 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 TNIP1Q15025 636 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
EDEM3-201ENST00000318130 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
EDEM3-201ENST00000318130 CUL5Q93034 780 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 SIRT1Q96EB6 747 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 TMPOP42166 694 aaKnown RBP16.1■□□□□ 0.17
EDEM3-201ENST00000318130 CADPS2Q86UW7 1296 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 TNRQ92752 1358 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 PPP4R3AQ6IN85 833 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
EDEM3-201ENST00000318130 CSPG5O95196 566 aa16.1■□□□□ 0.17
EDEM3-201ENST00000318130 GNPATO15228 680 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 CDKL5O76039 1030 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 MYCP01106 439 aaPredicted RBP16.09■□□□□ 0.17
EDEM3-201ENST00000318130 SP4Q02446 784 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 KRT32Q14532 448 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 DENND4BO75064 1496 aaPredicted RBP16.09■□□□□ 0.17
EDEM3-201ENST00000318130 ANO10Q9NW15 660 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 APBA3O96018 575 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 CKAP2LQ8IYA6 745 aa16.09■□□□□ 0.17
EDEM3-201ENST00000318130 LMOD1P29536 600 aaPredicted RBP16.08■□□□□ 0.17
EDEM3-201ENST00000318130 INCENPQ9NQS7 918 aa16.08■□□□□ 0.17
EDEM3-201ENST00000318130 GOLIM4O00461 696 aa16.08■□□□□ 0.17
EDEM3-201ENST00000318130 CCT2P78371 535 aaKnown RBP16.08■□□□□ 0.17
EDEM3-201ENST00000318130 EP400NLQ6ZTU2 488 aa16.08■□□□□ 0.17
EDEM3-201ENST00000318130 IFNL2Q8IZJ0 200 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 TAF4BQ92750 862 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 KIF4BQ2VIQ3 1234 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 PCF11O94913 1555 aaKnown RBP16.08■□□□□ 0.16
EDEM3-201ENST00000318130 PRPF40BQ6NWY9 871 aaKnown RBP16.08■□□□□ 0.16
EDEM3-201ENST00000318130 LARP1Q6PKG0 1096 aaKnown RBP16.08■□□□□ 0.16
EDEM3-201ENST00000318130 TMX1Q9H3N1 280 aa16.08■□□□□ 0.16
EDEM3-201ENST00000318130 PDIA4P13667 645 aaKnown RBP16.07■□□□□ 0.16
EDEM3-201ENST00000318130 JAKMIP3Q5VZ66 844 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
EDEM3-201ENST00000318130 KIF5CO60282 957 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 ADCY5O95622 1261 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 SPTY2D1Q68D10 685 aaPredicted RBP16.07■□□□□ 0.16
EDEM3-201ENST00000318130 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 UBE3BQ7Z3V4 1068 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 AKAP2Q9Y2D5 859 aa16.07■□□□□ 0.16
EDEM3-201ENST00000318130 ANKRD18AQ8IVF6 992 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
EDEM3-201ENST00000318130 RBM27Q9P2N5 1060 aaKnown RBP16.06■□□□□ 0.16
EDEM3-201ENST00000318130 ATAD2Q6PL18 1390 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 DYNC1I1O14576 645 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 MX1P20591 662 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 MAP3K9P80192 1104 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 TOP1P11387 765 aaKnown RBP16.06■□□□□ 0.16
EDEM3-201ENST00000318130 ZBTB21Q9ULJ3 1066 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 MCM5P33992 734 aa16.06■□□□□ 0.16
EDEM3-201ENST00000318130 RTCBQ9Y3I0 505 aaKnown RBP16.05■□□□□ 0.16
EDEM3-201ENST00000318130 MAP3K12Q12852 859 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 CWC25Q9NXE8 425 aaPredicted RBP16.05■□□□□ 0.16
EDEM3-201ENST00000318130 DNA2P51530 1060 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 RARSP54136 660 aaKnown RBP16.05■□□□□ 0.16
EDEM3-201ENST00000318130 AMOTQ4VCS5 1084 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 MAP9Q49MG5 647 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 DYDC1Q8WWB3 177 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
EDEM3-201ENST00000318130 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
EDEM3-201ENST00000318130 CTNNA3Q9UI47 895 aa16.04■□□□□ 0.16
EDEM3-201ENST00000318130 USP21Q9UK80 565 aa16.04■□□□□ 0.16
EDEM3-201ENST00000318130 KLHL10Q6JEL2 608 aa16.04■□□□□ 0.16
EDEM3-201ENST00000318130 GPATCH11Q8N954 259 aa16.04■□□□□ 0.16
EDEM3-201ENST00000318130 STK32BQ9NY57 414 aa16.04■□□□□ 0.16
EDEM3-201ENST00000318130 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 ZYXQ15942 572 aaKnown RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 OGFOD1Q8N543 542 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 PUF60Q9UHX1 559 aaKnown RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 AKNAD1Q5T1N1 836 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 ZNF354CQ86Y25 554 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
EDEM3-201ENST00000318130 RNF187Q5TA31 235 aaPredicted RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
EDEM3-201ENST00000318130 HDAC9Q9UKV0 1011 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms