RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 FOXD4L1Q9NU39 408 aa19.47■□□□□ 0.71
USH1C-202ENST00000318024 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
USH1C-202ENST00000318024 HYPKQ9NX55 129 aa19.46■□□□□ 0.71
USH1C-202ENST00000318024 THRAP3Q9Y2W1 955 aaKnown RBP19.46■□□□□ 0.71
USH1C-202ENST00000318024 GSPT1P15170 499 aaKnown RBP19.45■□□□□ 0.7
USH1C-202ENST00000318024 ZNF445P59923 1031 aa19.45■□□□□ 0.7
USH1C-202ENST00000318024 FAM98CQ17RN3 349 aaKnown RBP19.45■□□□□ 0.7
USH1C-202ENST00000318024 MAP3K2Q9Y2U5 619 aa19.45■□□□□ 0.7
USH1C-202ENST00000318024 ADCY9O60503 1353 aa19.45■□□□□ 0.7
USH1C-202ENST00000318024 CDC45O75419 566 aa19.44■□□□□ 0.7
USH1C-202ENST00000318024 NASPP49321 788 aaPredicted RBP19.44■□□□□ 0.7
USH1C-202ENST00000318024 PKNOX2Q96KN3 472 aa19.44■□□□□ 0.7
USH1C-202ENST00000318024 ZSCAN30Q86W11 494 aa19.44■□□□□ 0.7
USH1C-202ENST00000318024 SRCIN1Q9C0H9 1055 aa19.44■□□□□ 0.7
USH1C-202ENST00000318024 PRIM1P49642 420 aaKnown RBP19.43■□□□□ 0.7
USH1C-202ENST00000318024 BEND3Q5T5X7 828 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 CEP85Q6P2H3 762 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 COPS6Q7L5N1 327 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 XAGE3Q8WTP9 111 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 USP44Q9H0E7 712 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 BCL9LQ86UU0 1499 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 ACSBG1Q96GR2 724 aa19.43■□□□□ 0.7
USH1C-202ENST00000318024 CDCA7Q9BWT1 371 aaPredicted RBP19.43■□□□□ 0.7
USH1C-202ENST00000318024 NRAPQ86VF7 1730 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 C5P01031 1676 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 KAT6BQ8WYB5 2073 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 MEX3CQ5U5Q3 659 aaKnown RBP19.42■□□□□ 0.7
USH1C-202ENST00000318024 KSR2Q6VAB6 950 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 MARCH10Q8NA82 808 aaPredicted RBP19.42■□□□□ 0.7
USH1C-202ENST00000318024 ATG3Q9NT62 314 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 USP21Q9UK80 565 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 LRP6O75581 1613 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
USH1C-202ENST00000318024 OFD1O75665 1012 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 A1BGP04217 495 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 PLEKHM2Q8IWE5 1019 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 GOLGA6L22H0YM25 854 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 GNAI2P04899 355 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 FNBP4Q8N3X1 1017 aaPredicted RBP19.41■□□□□ 0.7
USH1C-202ENST00000318024 ANKRD44Q8N8A2 993 aa19.41■□□□□ 0.7
USH1C-202ENST00000318024 DDX49Q9Y6V7 483 aaKnown RBP19.41■□□□□ 0.7
USH1C-202ENST00000318024 CACNA1FO60840 1977 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 RABEP1Q15276 862 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 CWF19L2Q2TBE0 894 aaKnown RBP19.4■□□□□ 0.7
USH1C-202ENST00000318024 RIC3Q7Z5B4 369 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 LMBRD1Q9NUN5 540 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 TOGARAM1Q9Y4F4 1720 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 TNS2Q63HR2 1409 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 ATP10DQ9P241 1426 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
USH1C-202ENST00000318024 BARGINQ6ZT62 677 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 LRP10Q7Z4F1 713 aa19.4■□□□□ 0.7
USH1C-202ENST00000318024 RPAP2Q8IXW5 612 aaPredicted RBP19.4■□□□□ 0.7
USH1C-202ENST00000318024 LRRFIP2Q9Y608 721 aaKnown RBP19.4■□□□□ 0.7
USH1C-202ENST00000318024 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 GNAI3P08754 354 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 VPS72Q15906 364 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 NBPF14Q5TI25 921 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
USH1C-202ENST00000318024 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 PDLIM2Q96JY6 352 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 APBB1O00213 710 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 DDX58O95786 925 aaKnown RBP19.39■□□□□ 0.69
USH1C-202ENST00000318024 UBTFL1P0CB47 393 aaPredicted RBP19.39■□□□□ 0.69
USH1C-202ENST00000318024 TERF1P54274 439 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 HS1BP3Q53T59 392 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 USP26Q9BXU7 913 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 ZMYND15Q9H091 742 aa19.39■□□□□ 0.69
USH1C-202ENST00000318024 KIAA1211Q6ZU35 1233 aa19.38■□□□□ 0.69
USH1C-202ENST00000318024 DCTPP1Q9H773 170 aa19.38■□□□□ 0.69
USH1C-202ENST00000318024 KCPQ6ZWJ8 1503 aa19.37■□□□□ 0.69
USH1C-202ENST00000318024 NUCB2P80303 420 aa19.37■□□□□ 0.69
USH1C-202ENST00000318024 TTC22Q5TAA0 569 aa19.37■□□□□ 0.69
USH1C-202ENST00000318024 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
USH1C-202ENST00000318024 DNAJC10Q8IXB1 793 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 ZNF330Q9Y3S2 320 aaPredicted RBP19.36■□□□□ 0.69
USH1C-202ENST00000318024 BCL9O00512 1426 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 PXDNLA1KZ92 1463 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 ZSCAN23Q3MJ62 389 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 NWD2Q9ULI1 1742 aa19.36■□□□□ 0.69
USH1C-202ENST00000318024 GLI3P10071 1580 aa19.35■□□□□ 0.69
USH1C-202ENST00000318024 PKP1Q13835 747 aa19.35■□□□□ 0.69
USH1C-202ENST00000318024 PDCL3Q9H2J4 239 aa19.35■□□□□ 0.69
USH1C-202ENST00000318024 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.35■□□□□ 0.69
USH1C-202ENST00000318024 SLC4A9Q96Q91 983 aa19.35■□□□□ 0.69
USH1C-202ENST00000318024 MYD88Q99836 296 aa19.35■□□□□ 0.69
USH1C-202ENST00000318024 C9orf78Q9NZ63 289 aaPredicted RBP19.35■□□□□ 0.69
USH1C-202ENST00000318024 KCNQ2O43526 872 aa19.34■□□□□ 0.69
USH1C-202ENST00000318024 IGKV5-2P06315 115 aa19.34■□□□□ 0.69
USH1C-202ENST00000318024 TTLL7Q6ZT98 887 aa19.34■□□□□ 0.69
USH1C-202ENST00000318024 RBSNQ9H1K0 784 aa19.34■□□□□ 0.69
USH1C-202ENST00000318024 MCTP1Q6DN14 999 aa19.33■□□□□ 0.69
USH1C-202ENST00000318024 ZDHHC9Q9Y397 364 aa19.33■□□□□ 0.69
USH1C-202ENST00000318024 FAM182BQ5T319 152 aa19.33■□□□□ 0.68
USH1C-202ENST00000318024 NOL7Q9UMY1 257 aaKnown RBP19.33■□□□□ 0.68
USH1C-202ENST00000318024 AFF2P51816 1311 aa19.33■□□□□ 0.68
USH1C-202ENST00000318024 ZNF500O60304 480 aaPredicted RBP19.32■□□□□ 0.68
USH1C-202ENST00000318024 LINS1Q8NG48 757 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms