RNA–Protein interactions for RNA: ENST00000316824.3

ALX1-201, Transcript of ALX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX1-201ENST00000316824 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.23
ALX1-201ENST00000316824 MAP3K2Q9Y2U5 619 aa16.52■□□□□ 0.23
ALX1-201ENST00000316824 NBPF26B4DH59 902 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 A1BGP04217 495 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 ATP6V1AP38606 617 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 NBPF14Q5TI25 921 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 NBPF10Q6P3W6 841 aaKnown RBP16.51■□□□□ 0.23
ALX1-201ENST00000316824 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 NBPF15Q8N660 670 aa16.51■□□□□ 0.23
ALX1-201ENST00000316824 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 GNAI3P08754 354 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
ALX1-201ENST00000316824 BEND3Q5T5X7 828 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 RIC3Q7Z5B4 369 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
ALX1-201ENST00000316824 HDAC1Q13547 482 aaPredicted RBP16.49■□□□□ 0.23
ALX1-201ENST00000316824 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
ALX1-201ENST00000316824 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
ALX1-201ENST00000316824 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
ALX1-201ENST00000316824 FAM182BQ5T319 152 aa16.48■□□□□ 0.23
ALX1-201ENST00000316824 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
ALX1-201ENST00000316824 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
ALX1-201ENST00000316824 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
ALX1-201ENST00000316824 HMGB2P26583 209 aaKnown RBP16.47■□□□□ 0.23
ALX1-201ENST00000316824 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
ALX1-201ENST00000316824 KIF6Q6ZMV9 814 aa16.47■□□□□ 0.23
ALX1-201ENST00000316824 NPM2Q86SE8 214 aaKnown RBP16.47■□□□□ 0.23
ALX1-201ENST00000316824 MEIS3Q99687 375 aa16.47■□□□□ 0.23
ALX1-201ENST00000316824 CCDC87Q9NVE4 849 aa16.47■□□□□ 0.23
ALX1-201ENST00000316824 RGS17Q9UGC6 210 aaPredicted RBP16.47■□□□□ 0.23
ALX1-201ENST00000316824 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
ALX1-201ENST00000316824 ZBTB1Q9Y2K1 713 aa16.46■□□□□ 0.23
ALX1-201ENST00000316824 CNTNAP4Q9C0A0 1308 aa16.46■□□□□ 0.23
ALX1-201ENST00000316824 GNAI2P04899 355 aa16.45■□□□□ 0.22
ALX1-201ENST00000316824 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
ALX1-201ENST00000316824 CRKLP46109 303 aaKnown RBP16.45■□□□□ 0.22
ALX1-201ENST00000316824 ITPK1Q13572 414 aa16.45■□□□□ 0.22
ALX1-201ENST00000316824 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
ALX1-201ENST00000316824 RGPD3A6NKT7 1758 aaPredicted RBP16.45■□□□□ 0.22
ALX1-201ENST00000316824 ANKRD36CQ5JPF3 1778 aa16.45■□□□□ 0.22
ALX1-201ENST00000316824 RGPD4Q7Z3J3 1758 aa16.45■□□□□ 0.22
ALX1-201ENST00000316824 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
ALX1-201ENST00000316824 INTS5Q6P9B9 1019 aaKnown RBP16.44■□□□□ 0.22
ALX1-201ENST00000316824 USP44Q9H0E7 712 aa16.44■□□□□ 0.22
ALX1-201ENST00000316824 CCNL1Q9UK58 526 aaPredicted RBP16.44■□□□□ 0.22
ALX1-201ENST00000316824 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
ALX1-201ENST00000316824 NEURL1BA8MQ27 555 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 UTYO14607 1347 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 RC3H1Q5TC82 1133 aaKnown RBP16.43■□□□□ 0.22
ALX1-201ENST00000316824 POTEAQ6S8J7 498 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 TTLL7Q6ZT98 887 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 PTF1AQ7RTS3 328 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 MYH14Q7Z406 1995 aaKnown RBP16.43■□□□□ 0.22
ALX1-201ENST00000316824 MYD88Q99836 296 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
ALX1-201ENST00000316824 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
ALX1-201ENST00000316824 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 ERVV-1B6SEH8 477 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 GRM8O00222 908 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 HMMRO75330 724 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 IGHDP01880 384 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 EIF5P55010 431 aaKnown RBP16.42■□□□□ 0.22
ALX1-201ENST00000316824 HSP90AB3PQ58FF7 597 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 SLC27A3Q5K4L6 730 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 ANKRD44Q8N8A2 993 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
ALX1-201ENST00000316824 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
ALX1-201ENST00000316824 TNS1Q9HBL0 1735 aaKnown RBP16.41■□□□□ 0.22
ALX1-201ENST00000316824 SCN7AQ01118 1682 aa16.41■□□□□ 0.22
ALX1-201ENST00000316824 COL15A1P39059 1388 aa16.41■□□□□ 0.22
ALX1-201ENST00000316824 A0A087WZG4 1122 aa16.41■□□□□ 0.22
ALX1-201ENST00000316824 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
ALX1-201ENST00000316824 CWF19L2Q2TBE0 894 aaKnown RBP16.41■□□□□ 0.22
ALX1-201ENST00000316824 CEP85Q6P2H3 762 aa16.41■□□□□ 0.22
ALX1-201ENST00000316824 RGL2O15211 777 aa16.4■□□□□ 0.22
ALX1-201ENST00000316824 TRIM37O94972 964 aa16.4■□□□□ 0.22
ALX1-201ENST00000316824 GCKRQ14397 625 aa16.4■□□□□ 0.22
ALX1-201ENST00000316824 GCC1Q96CN9 775 aa16.4■□□□□ 0.22
ALX1-201ENST00000316824 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
ALX1-201ENST00000316824 SPDYE2BA6NHP3 402 aa16.39■□□□□ 0.21
ALX1-201ENST00000316824 SPDYE6P0CI01 402 aa16.39■□□□□ 0.21
ALX1-201ENST00000316824 SPDYE2Q495Y8 402 aa16.39■□□□□ 0.21
ALX1-201ENST00000316824 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
ALX1-201ENST00000316824 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
ALX1-201ENST00000316824 NUP98P52948 1817 aa16.38■□□□□ 0.21
ALX1-201ENST00000316824 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
ALX1-201ENST00000316824 TCIRG1Q13488 830 aa16.38■□□□□ 0.21
ALX1-201ENST00000316824 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
ALX1-201ENST00000316824 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
ALX1-201ENST00000316824 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
ALX1-201ENST00000316824 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
ALX1-201ENST00000316824 NBPF7P0C2Y1 421 aaPredicted RBP16.37■□□□□ 0.21
ALX1-201ENST00000316824 ZNF652Q9Y2D9 606 aa16.37■□□□□ 0.21
ALX1-201ENST00000316824 EP400Q96L91 3159 aa16.37■□□□□ 0.21
ALX1-201ENST00000316824 SIRT2Q8IXJ6 389 aa16.36■□□□□ 0.21
ALX1-201ENST00000316824 ISCA1Q9BUE6 129 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms