RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 ST5P78524 1137 aa15.37■□□□□ 0.05
CCDC89-201ENST00000316398 PRPF40BQ6NWY9 871 aaKnown RBP15.37■□□□□ 0.05
CCDC89-201ENST00000316398 RSPH6AQ9H0K4 717 aa15.37■□□□□ 0.05
CCDC89-201ENST00000316398 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
CCDC89-201ENST00000316398 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
CCDC89-201ENST00000316398 FER1L6Q2WGJ9 1857 aa15.37■□□□□ 0.05
CCDC89-201ENST00000316398 HTATSF1O43719 755 aaKnown RBP15.36■□□□□ 0.05
CCDC89-201ENST00000316398 TPTE2Q6XPS3 522 aa15.36■□□□□ 0.05
CCDC89-201ENST00000316398 ANKRD31Q8N7Z5 1873 aa15.36■□□□□ 0.05
CCDC89-201ENST00000316398 L3MBTL3Q96JM7 780 aaPredicted RBP15.36■□□□□ 0.05
CCDC89-201ENST00000316398 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
CCDC89-201ENST00000316398 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
CCDC89-201ENST00000316398 HSPA1AP0DMV8 641 aaKnown RBP15.35■□□□□ 0.05
CCDC89-201ENST00000316398 HSPA1BP0DMV9 641 aaKnown RBP15.35■□□□□ 0.05
CCDC89-201ENST00000316398 NPR1P16066 1061 aa15.35■□□□□ 0.05
CCDC89-201ENST00000316398 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
CCDC89-201ENST00000316398 NPHP1O15259 732 aa15.34■□□□□ 0.05
CCDC89-201ENST00000316398 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
CCDC89-201ENST00000316398 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
CCDC89-201ENST00000316398 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
CCDC89-201ENST00000316398 ZNF652Q9Y2D9 606 aa15.34■□□□□ 0.05
CCDC89-201ENST00000316398 SIPA1L3O60292 1781 aaPredicted RBP15.34■□□□□ 0.05
CCDC89-201ENST00000316398 SLX4Q8IY92 1834 aa15.33■□□□□ 0.05
CCDC89-201ENST00000316398 PRAMEF22A3QJZ6 481 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 NBPF26B4DH59 902 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
CCDC89-201ENST00000316398 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 NBPF10Q6P3W6 841 aaKnown RBP15.33■□□□□ 0.04
CCDC89-201ENST00000316398 RTKN2Q8IZC4 609 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 NBPF15Q8N660 670 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
CCDC89-201ENST00000316398 PASKQ96RG2 1323 aa15.33■□□□□ 0.04
CCDC89-201ENST00000316398 POTEIP0CG38 1075 aa15.32■□□□□ 0.04
CCDC89-201ENST00000316398 POTEJP0CG39 1038 aa15.32■□□□□ 0.04
CCDC89-201ENST00000316398 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
CCDC89-201ENST00000316398 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
CCDC89-201ENST00000316398 LDHDQ86WU2 507 aa15.32■□□□□ 0.04
CCDC89-201ENST00000316398 TAF1DQ9H5J8 278 aaPredicted RBP15.32■□□□□ 0.04
CCDC89-201ENST00000316398 FKBP4Q02790 459 aaKnown RBP eCLIP15.31■□□□□ 0.04
CCDC89-201ENST00000316398 MCM10Q7L590 875 aa15.31■□□□□ 0.04
CCDC89-201ENST00000316398 TIAM2Q8IVF5 1701 aa15.3■□□□□ 0.04
CCDC89-201ENST00000316398 FZD9O00144 591 aa15.3■□□□□ 0.04
CCDC89-201ENST00000316398 PIP4K2AP48426 406 aaPredicted RBP15.3■□□□□ 0.04
CCDC89-201ENST00000316398 NIP7Q9Y221 180 aaKnown RBP eCLIP15.3■□□□□ 0.04
CCDC89-201ENST00000316398 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
CCDC89-201ENST00000316398 U2AF1L5P0DN76 240 aaPredicted RBP15.29■□□□□ 0.04
CCDC89-201ENST00000316398 U2AF1Q01081 240 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC89-201ENST00000316398 MKRN1Q9UHC7 482 aaKnown RBP15.29■□□□□ 0.04
CCDC89-201ENST00000316398 ERVV-1B6SEH8 477 aa15.28■□□□□ 0.04
CCDC89-201ENST00000316398 PPP2R1AP30153 589 aa15.28■□□□□ 0.04
CCDC89-201ENST00000316398 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
CCDC89-201ENST00000316398 HLFQ16534 295 aa15.28■□□□□ 0.04
CCDC89-201ENST00000316398 PNMA8AQ86V59 439 aaPredicted RBP15.28■□□□□ 0.04
CCDC89-201ENST00000316398 COL11A2P13942 1736 aaPredicted RBP15.28■□□□□ 0.04
CCDC89-201ENST00000316398 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 CAPN15O75808 1086 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 CRY2Q49AN0 593 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 GRIPAP1Q4V328 841 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 CC2D2BQ6DHV5 1058 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 PSMD1Q99460 953 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 PRDM10Q9NQV6 1147 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
CCDC89-201ENST00000316398 HACL1Q9UJ83 578 aa15.27■□□□□ 0.04
CCDC89-201ENST00000316398 CNTNAP1P78357 1384 aa15.27■□□□□ 0.03
CCDC89-201ENST00000316398 SCN4AP35499 1836 aa15.26■□□□□ 0.03
CCDC89-201ENST00000316398 DCTN1Q14203 1278 aa15.26■□□□□ 0.03
CCDC89-201ENST00000316398 GPC2Q8N158 579 aa15.26■□□□□ 0.03
CCDC89-201ENST00000316398 SYNE4Q8N205 404 aa15.26■□□□□ 0.03
CCDC89-201ENST00000316398 HOXA10P31260 410 aaPredicted RBP15.26■□□□□ 0.03
CCDC89-201ENST00000316398 EPHX2P34913 555 aa15.26■□□□□ 0.03
CCDC89-201ENST00000316398 PNISRQ8TF01 805 aaKnown RBP15.26■□□□□ 0.03
CCDC89-201ENST00000316398 GTF2E1P29083 439 aaPredicted RBP15.25■□□□□ 0.03
CCDC89-201ENST00000316398 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
CCDC89-201ENST00000316398 VEGFBP49765 207 aa15.25■□□□□ 0.03
CCDC89-201ENST00000316398 OLFM4Q6UX06 510 aa15.25■□□□□ 0.03
CCDC89-201ENST00000316398 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
CCDC89-201ENST00000316398 NYXQ9GZU5 481 aa15.25■□□□□ 0.03
CCDC89-201ENST00000316398 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
CCDC89-201ENST00000316398 BCORQ6W2J9 1755 aa15.24■□□□□ 0.03
CCDC89-201ENST00000316398 FOXN1O15353 648 aa15.24■□□□□ 0.03
CCDC89-201ENST00000316398 WBP1LQ9NX94 342 aa15.24■□□□□ 0.03
CCDC89-201ENST00000316398 MIS18AQ9NYP9 233 aa15.24■□□□□ 0.03
CCDC89-201ENST00000316398 ZNF541Q9H0D2 1346 aa15.23■□□□□ 0.03
CCDC89-201ENST00000316398 DEFB115Q30KQ5 88 aa15.23■□□□□ 0.03
CCDC89-201ENST00000316398 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
CCDC89-201ENST00000316398 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
CCDC89-201ENST00000316398 RASSF10A6NK89 507 aa15.22■□□□□ 0.03
CCDC89-201ENST00000316398 FAM177BA6PVY3 158 aa15.22■□□□□ 0.03
CCDC89-201ENST00000316398 CTCFP49711 727 aaPredicted RBP15.22■□□□□ 0.03
CCDC89-201ENST00000316398 EIF4A1P60842 406 aaKnown RBP15.22■□□□□ 0.03
CCDC89-201ENST00000316398 EAPPQ56P03 285 aaPredicted RBP15.22■□□□□ 0.03
CCDC89-201ENST00000316398 CRAMP1Q96RY5 1269 aa15.22■□□□□ 0.03
CCDC89-201ENST00000316398 MAP3K15Q6ZN16 1313 aa15.21■□□□□ 0.03
CCDC89-201ENST00000316398 ZNF34Q8IZ26 560 aa15.21■□□□□ 0.03
CCDC89-201ENST00000316398 SNED1Q8TER0 1413 aa15.21■□□□□ 0.03
CCDC89-201ENST00000316398 PLEKHF1Q96S99 279 aa15.21■□□□□ 0.03
CCDC89-201ENST00000316398 VPS33BQ9H267 617 aa15.21■□□□□ 0.03
CCDC89-201ENST00000316398 MAP1SQ66K74 1059 aaPredicted RBP15.2■□□□□ 0.02
CCDC89-201ENST00000316398 SLC10A5Q5PT55 438 aa15.19■□□□□ 0.02
CCDC89-201ENST00000316398 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms