RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 NFATC2IPQ8NCF5 419 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 FMNL2Q96PY5 1086 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 SIL1Q9H173 461 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 LEKR1Q6ZMV7 388 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 CLASRPQ8N2M8 674 aaKnown RBP12.78□□□□□ -0.36
HNF4A-201ENST00000316099 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
HNF4A-201ENST00000316099 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 CCDC192P0DO97 292 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 CALRP27797 417 aaKnown RBP12.78□□□□□ -0.36
HNF4A-201ENST00000316099 NEK4P51957 841 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 MYD88Q99836 296 aa12.78□□□□□ -0.36
HNF4A-201ENST00000316099 TRDNQ13061 729 aa12.77□□□□□ -0.36
HNF4A-201ENST00000316099 C8orf34Q49A92 452 aa12.77□□□□□ -0.36
HNF4A-201ENST00000316099 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.36
HNF4A-201ENST00000316099 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
HNF4A-201ENST00000316099 MAP4K4O95819 1239 aaPredicted RBP12.77□□□□□ -0.37
HNF4A-201ENST00000316099 ZNF853P0CG23 659 aa12.77□□□□□ -0.37
HNF4A-201ENST00000316099 PHAXQ9H814 394 aaKnown RBP12.77□□□□□ -0.37
HNF4A-201ENST00000316099 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.37
HNF4A-201ENST00000316099 CCDC112Q8NEF3 446 aa12.77□□□□□ -0.37
HNF4A-201ENST00000316099 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
HNF4A-201ENST00000316099 ARHGAP23Q9P227 1491 aa12.76□□□□□ -0.37
HNF4A-201ENST00000316099 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
HNF4A-201ENST00000316099 LARP1Q6PKG0 1096 aaKnown RBP12.76□□□□□ -0.37
HNF4A-201ENST00000316099 SAFBQ15424 915 aaKnown RBP eCLIP12.76□□□□□ -0.372e-7■■■■□ 25.5
HNF4A-201ENST00000316099 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 ERC1Q8IUD2 1116 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 ANKRD44Q8N8A2 993 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 KINO60870 393 aaKnown RBP12.75□□□□□ -0.37
HNF4A-201ENST00000316099 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 BABAM1Q9NWV8 329 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.75□□□□□ -0.37
HNF4A-201ENST00000316099 HIP1O00291 1037 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 COL3A1P02461 1466 aaPredicted RBP12.75□□□□□ -0.37
HNF4A-201ENST00000316099 KDM4AO75164 1064 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 SNRPA1P09661 255 aaKnown RBP12.75□□□□□ -0.37
HNF4A-201ENST00000316099 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
HNF4A-201ENST00000316099 RDXP35241 583 aaKnown RBP12.74□□□□□ -0.37
HNF4A-201ENST00000316099 PIP4K2AP48426 406 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-201ENST00000316099 PDE4CQ08493 712 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 CEP85Q6P2H3 762 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 SMC2O95347 1197 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 FOSBP53539 338 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 PDILTQ8N807 584 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
HNF4A-201ENST00000316099 ZNF396Q96N95 335 aaPredicted RBP12.74□□□□□ -0.37
HNF4A-201ENST00000316099 IL2RBP14784 551 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 SHPRHQ149N8 1683 aa12.74□□□□□ -0.37
HNF4A-201ENST00000316099 ZNF335Q9H4Z2 1342 aaPredicted RBP12.73□□□□□ -0.37
HNF4A-201ENST00000316099 H0YHG0 523 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 ABCC4O15439 1325 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 USP19O94966 1318 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 PODXL2Q9NZ53 605 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
HNF4A-201ENST00000316099 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.73□□□□□ -0.37
HNF4A-201ENST00000316099 KCNQ3O43525 872 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 NFXL1Q6ZNB6 911 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 NRXN3Q9Y4C0 1643 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 DCAF5Q96JK2 942 aa12.73□□□□□ -0.37
HNF4A-201ENST00000316099 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 MX1P20591 662 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 SMARCE1Q969G3 411 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 RAB11FIP3O75154 756 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
HNF4A-201ENST00000316099 VPS53Q5VIR6 699 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 C16orf71Q8IYS4 520 aaPredicted RBP12.72□□□□□ -0.37
HNF4A-201ENST00000316099 ERICH2A1L162 156 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 FIBPO43427 364 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 AACSQ86V21 672 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 EXOC5O00471 708 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 KIF1BPQ96EK5 621 aa12.72□□□□□ -0.37
HNF4A-201ENST00000316099 XAGE3Q8WTP9 111 aa12.71□□□□□ -0.37
HNF4A-201ENST00000316099 PDCL3Q9H2J4 239 aa12.71□□□□□ -0.37
HNF4A-201ENST00000316099 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
HNF4A-201ENST00000316099 BTG4Q9NY30 223 aa12.71□□□□□ -0.37
HNF4A-201ENST00000316099 STARD3NLO95772 234 aa12.71□□□□□ -0.38
HNF4A-201ENST00000316099 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.38
HNF4A-201ENST00000316099 ZNF790Q6PG37 636 aa12.71□□□□□ -0.38
HNF4A-201ENST00000316099 TNMDQ9H2S6 317 aa12.71□□□□□ -0.38
HNF4A-201ENST00000316099 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.38
HNF4A-201ENST00000316099 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 COPS6Q7L5N1 327 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 PCDH11XQ9BZA7 1347 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 PCDH11YQ9BZA8 1340 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 KSR2Q6VAB6 950 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
HNF4A-201ENST00000316099 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
HNF4A-201ENST00000316099 DCTPP1Q9H773 170 aa12.7□□□□□ -0.38
HNF4A-201ENST00000316099 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms