RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
CKS2-201ENST00000314355 MYL6BP14649 208 aa16.61■□□□□ 0.25
CKS2-201ENST00000314355 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
CKS2-201ENST00000314355 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
CKS2-201ENST00000314355 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
CKS2-201ENST00000314355 NYXQ9GZU5 481 aa16.61■□□□□ 0.25
CKS2-201ENST00000314355 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
CKS2-201ENST00000314355 NBPF26B4DH59 902 aa16.6■□□□□ 0.25
CKS2-201ENST00000314355 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
CKS2-201ENST00000314355 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
CKS2-201ENST00000314355 STYK1Q6J9G0 422 aa16.6■□□□□ 0.25
CKS2-201ENST00000314355 NBPF10Q6P3W6 841 aaKnown RBP16.6■□□□□ 0.25
CKS2-201ENST00000314355 NBPF15Q8N660 670 aa16.6■□□□□ 0.25
CKS2-201ENST00000314355 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
CKS2-201ENST00000314355 KIF3CO14782 793 aa16.59■□□□□ 0.25
CKS2-201ENST00000314355 C21orf2O43822 256 aa16.59■□□□□ 0.25
CKS2-201ENST00000314355 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
CKS2-201ENST00000314355 LAS1LQ9Y4W2 734 aaKnown RBP16.59■□□□□ 0.25
CKS2-201ENST00000314355 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
CKS2-201ENST00000314355 ZC3H4Q9UPT8 1303 aaKnown RBP16.59■□□□□ 0.25
CKS2-201ENST00000314355 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
CKS2-201ENST00000314355 HSPA6P17066 643 aa16.58■□□□□ 0.24
CKS2-201ENST00000314355 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
CKS2-201ENST00000314355 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
CKS2-201ENST00000314355 SRGNP10124 158 aa16.57■□□□□ 0.24
CKS2-201ENST00000314355 NPR1P16066 1061 aa16.57■□□□□ 0.24
CKS2-201ENST00000314355 RASSF7Q02833 373 aa16.57■□□□□ 0.24
CKS2-201ENST00000314355 PRKRIP1Q9H875 184 aaPredicted RBP16.57■□□□□ 0.24
CKS2-201ENST00000314355 NRXN2Q9P2S2 1712 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 HLFQ16534 295 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 RRAGCQ9HB90 399 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
CKS2-201ENST00000314355 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
CKS2-201ENST00000314355 ERFEQ4G0M1 354 aa16.55■□□□□ 0.24
CKS2-201ENST00000314355 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
CKS2-201ENST00000314355 TMX4Q9H1E5 349 aaPredicted RBP16.55■□□□□ 0.24
CKS2-201ENST00000314355 TAOK3Q9H2K8 898 aa16.55■□□□□ 0.24
CKS2-201ENST00000314355 CALD1Q05682 793 aaKnown RBP16.54■□□□□ 0.24
CKS2-201ENST00000314355 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
CKS2-201ENST00000314355 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
CKS2-201ENST00000314355 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
CKS2-201ENST00000314355 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
CKS2-201ENST00000314355 APLP1P51693 650 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 PARP10Q53GL7 1025 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 CCDC93Q567U6 631 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 HSP90AB3PQ58FF7 597 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
CKS2-201ENST00000314355 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
CKS2-201ENST00000314355 GPTP24298 496 aa16.52■□□□□ 0.24
CKS2-201ENST00000314355 GIGYF2Q6Y7W6 1299 aaKnown RBP16.52■□□□□ 0.24
CKS2-201ENST00000314355 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.24
CKS2-201ENST00000314355 CHMP4AQ9BY43 222 aa16.52■□□□□ 0.24
CKS2-201ENST00000314355 KLRG2A4D1S0 409 aaPredicted RBP16.51■□□□□ 0.23
CKS2-201ENST00000314355 NFKBIEO00221 500 aa16.51■□□□□ 0.23
CKS2-201ENST00000314355 CHL1O00533 1208 aa16.51■□□□□ 0.23
CKS2-201ENST00000314355 FSTL1Q12841 308 aa16.51■□□□□ 0.23
CKS2-201ENST00000314355 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
CKS2-201ENST00000314355 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
CKS2-201ENST00000314355 SMC1BQ8NDV3 1235 aa16.5■□□□□ 0.23
CKS2-201ENST00000314355 RBM17Q96I25 401 aaKnown RBP16.5■□□□□ 0.23
CKS2-201ENST00000314355 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
CKS2-201ENST00000314355 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
CKS2-201ENST00000314355 GRIPAP1Q4V328 841 aa16.49■□□□□ 0.23
CKS2-201ENST00000314355 CC2D2BQ6DHV5 1058 aa16.49■□□□□ 0.23
CKS2-201ENST00000314355 NUTM1Q86Y26 1132 aa16.49■□□□□ 0.23
CKS2-201ENST00000314355 CFAP44Q96MT7 982 aa16.49■□□□□ 0.23
CKS2-201ENST00000314355 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
CKS2-201ENST00000314355 HOXB7P09629 217 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 COPS6Q7L5N1 327 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 ZNF34Q8IZ26 560 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
CKS2-201ENST00000314355 TRIM35Q9UPQ4 493 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 BCORQ6W2J9 1755 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 KDM3BQ7LBC6 1761 aa16.48■□□□□ 0.23
CKS2-201ENST00000314355 DLEC1Q9Y238 1755 aa16.47■□□□□ 0.23
CKS2-201ENST00000314355 APAF1O14727 1248 aa16.47■□□□□ 0.23
CKS2-201ENST00000314355 GNAI1P63096 354 aa16.47■□□□□ 0.23
CKS2-201ENST00000314355 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
CKS2-201ENST00000314355 HDGFL1Q5TGJ6 251 aa16.47■□□□□ 0.23
CKS2-201ENST00000314355 DBF4Q9UBU7 674 aaPredicted RBP16.47■□□□□ 0.23
CKS2-201ENST00000314355 LAMB4A4D0S4 1761 aa16.46■□□□□ 0.23
CKS2-201ENST00000314355 PDIA6Q15084 440 aa16.46■□□□□ 0.23
CKS2-201ENST00000314355 XAGE3Q8WTP9 111 aa16.46■□□□□ 0.23
CKS2-201ENST00000314355 JDP2Q8WYK2 163 aa16.46■□□□□ 0.23
CKS2-201ENST00000314355 ANP32CO43423 234 aa16.45■□□□□ 0.22
CKS2-201ENST00000314355 ANXA1P04083 346 aa16.45■□□□□ 0.22
CKS2-201ENST00000314355 HYPKQ9NX55 129 aa16.45■□□□□ 0.22
CKS2-201ENST00000314355 IBTKQ9P2D0 1353 aaPredicted RBP16.45■□□□□ 0.22
CKS2-201ENST00000314355 SBF1O95248 1867 aa16.45■□□□□ 0.22
CKS2-201ENST00000314355 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
CKS2-201ENST00000314355 ANKRD31Q8N7Z5 1873 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
CKS2-201ENST00000314355 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms