RNA–Protein interactions for RNA: ENST00000314124.11

TMEM40-202, Transcript of transmembrane protein 40, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TMEM40, Length 2,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-202ENST00000314124 POLA2Q14181 598 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 HSP90AB4PQ58FF6 505 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 CYP46A1Q9Y6A2 500 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 METP08581 1390 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 VPS37CA5D8V6 355 aaPredicted RBP18.79■□□□□ 0.6
TMEM40-202ENST00000314124 PTGS1P23219 599 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 TYRO3Q06418 890 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
TMEM40-202ENST00000314124 LARP6Q9BRS8 491 aaKnown RBP18.79■□□□□ 0.6
TMEM40-202ENST00000314124 PPP6R1Q9UPN7 881 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
TMEM40-202ENST00000314124 LARGE1O95461 756 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 TAF3Q5VWG9 929 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 PPP1R42Q7Z4L9 355 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 TTC41PQ6P2S7 1318 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 PDCP20941 246 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 PRR36Q9H6K5 1346 aa18.78■□□□□ 0.6
TMEM40-202ENST00000314124 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
TMEM40-202ENST00000314124 TOPAZ1Q8N9V7 1692 aa18.77■□□□□ 0.6
TMEM40-202ENST00000314124 NCBP1Q09161 790 aaKnown RBP18.77■□□□□ 0.6
TMEM40-202ENST00000314124 JAKMIP1Q96N16 626 aaKnown RBP18.77■□□□□ 0.6
TMEM40-202ENST00000314124 CGNQ9P2M7 1197 aaKnown RBP18.77■□□□□ 0.6
TMEM40-202ENST00000314124 GLRX3O76003 335 aaKnown RBP18.77■□□□□ 0.59
TMEM40-202ENST00000314124 DRC7Q8IY82 874 aa18.77■□□□□ 0.59
TMEM40-202ENST00000314124 KCNB2Q92953 911 aa18.77■□□□□ 0.59
TMEM40-202ENST00000314124 BABAM1Q9NWV8 329 aa18.77■□□□□ 0.59
TMEM40-202ENST00000314124 SPG7Q9UQ90 795 aa18.77■□□□□ 0.59
TMEM40-202ENST00000314124 CCDC186Q7Z3E2 898 aa18.76■□□□□ 0.59
TMEM40-202ENST00000314124 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
TMEM40-202ENST00000314124 LARP1BQ659C4 914 aaKnown RBP18.75■□□□□ 0.59
TMEM40-202ENST00000314124 TTC6Q86TZ1 520 aa18.75■□□□□ 0.59
TMEM40-202ENST00000314124 SCAND2PQ9GZW5 306 aaPredicted RBP18.75■□□□□ 0.59
TMEM40-202ENST00000314124 DDX19AQ9NUU7 478 aaKnown RBP18.75■□□□□ 0.59
TMEM40-202ENST00000314124 GOLGA6L4A6NEF3 574 aa18.75■□□□□ 0.59
TMEM40-202ENST00000314124 ZKSCAN1P17029 563 aaPredicted RBP18.75■□□□□ 0.59
TMEM40-202ENST00000314124 FLT4P35916 1363 aa18.75■□□□□ 0.59
TMEM40-202ENST00000314124 USP6P35125 1406 aa18.75■□□□□ 0.59
TMEM40-202ENST00000314124 SRGAP3O43295 1099 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 CPA1P15085 419 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 GABPB1Q06547 395 aaPredicted RBP18.74■□□□□ 0.59
TMEM40-202ENST00000314124 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 PLA2G4DQ86XP0 818 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 ACEP12821 1306 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 CAVIN2O95810 425 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 TNNT1P13805 278 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 TRIM5Q9C035 493 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 CBX8Q9HC52 389 aa18.74■□□□□ 0.59
TMEM40-202ENST00000314124 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 SBNO1A3KN83 1393 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 PLEKHG3A1L390 1219 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 CCDC112Q8NEF3 446 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 NECTIN2Q92692 538 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 C16orf45Q96MC5 204 aaPredicted RBP18.73■□□□□ 0.59
TMEM40-202ENST00000314124 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 TTC21AQ8NDW8 1320 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 ZNF75DP51815 510 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 ME3Q16798 604 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 ANO6Q4KMQ2 910 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 ZSCAN25Q6NSZ9 544 aa18.73■□□□□ 0.59
TMEM40-202ENST00000314124 PRPF40BQ6NWY9 871 aaKnown RBP18.73■□□□□ 0.59
TMEM40-202ENST00000314124 RBM43Q6ZSC3 357 aaKnown RBP18.73■□□□□ 0.59
TMEM40-202ENST00000314124 TDRD7Q8NHU6 1098 aaKnown RBP18.73■□□□□ 0.59
TMEM40-202ENST00000314124 LIG1P18858 919 aa18.72■□□□□ 0.59
TMEM40-202ENST00000314124 CAMK4Q16566 473 aa18.72■□□□□ 0.59
TMEM40-202ENST00000314124 PSMA5P28066 241 aa18.72■□□□□ 0.59
TMEM40-202ENST00000314124 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
TMEM40-202ENST00000314124 GPATCH3Q96I76 525 aa18.72■□□□□ 0.59
TMEM40-202ENST00000314124 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
TMEM40-202ENST00000314124 ANKRD1Q15327 319 aa18.71■□□□□ 0.59
TMEM40-202ENST00000314124 DACT1Q9NYF0 836 aa18.71■□□□□ 0.59
TMEM40-202ENST00000314124 CDC25BP30305 580 aa18.71■□□□□ 0.58
TMEM40-202ENST00000314124 PTH1RQ03431 593 aa18.71■□□□□ 0.58
TMEM40-202ENST00000314124 ST3GAL1Q11201 340 aa18.71■□□□□ 0.58
TMEM40-202ENST00000314124 NECTIN1Q15223 517 aa18.71■□□□□ 0.58
TMEM40-202ENST00000314124 CLSTN2Q9H4D0 955 aa18.71■□□□□ 0.58
TMEM40-202ENST00000314124 LRMPQ12912 555 aa18.7■□□□□ 0.58
TMEM40-202ENST00000314124 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
TMEM40-202ENST00000314124 SPATA32Q96LK8 384 aa18.7■□□□□ 0.58
TMEM40-202ENST00000314124 DDX41Q9UJV9 622 aaKnown RBP18.7■□□□□ 0.58
TMEM40-202ENST00000314124 CHMP3Q9Y3E7 222 aa18.7■□□□□ 0.58
TMEM40-202ENST00000314124 NEMFO60524 1076 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 TAF7Q15545 349 aaPredicted RBP18.69■□□□□ 0.58
TMEM40-202ENST00000314124 HDGFL1Q5TGJ6 251 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CDC37L1Q7L3B6 337 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 ZNF771Q7L3S4 317 aaPredicted RBP18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CKAP2LQ8IYA6 745 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CLASRPQ8N2M8 674 aaKnown RBP18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CHMP4AQ9BY43 222 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CEP170BQ9Y4F5 1589 aaPredicted RBP18.69■□□□□ 0.58
TMEM40-202ENST00000314124 HIP1O00291 1037 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 EYA1Q99502 592 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
TMEM40-202ENST00000314124 ZNF165P49910 485 aa18.68■□□□□ 0.58
TMEM40-202ENST00000314124 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
TMEM40-202ENST00000314124 NECAB1Q8N987 351 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms