RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 SMARCA5O60264 1052 aaPredicted RBP11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 PHF14O94880 888 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 UBR2Q8IWV8 1755 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 AK9Q5TCS8 1911 aa11.53□□□□□ -0.56
RBFOX1-201ENST00000311745 FLIIQ13045 1269 aa11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 TTC22Q5TAA0 569 aa11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 EGFL6Q8IUX8 553 aa11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 RPAP2Q8IXW5 612 aaPredicted RBP11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.56
RBFOX1-201ENST00000311745 GOLIM4O00461 696 aa11.52□□□□□ -0.57
RBFOX1-201ENST00000311745 SOS1Q07889 1333 aaPredicted RBP11.52□□□□□ -0.57
RBFOX1-201ENST00000311745 DCCP43146 1447 aa11.52□□□□□ -0.57
RBFOX1-201ENST00000311745 MEGF6O75095 1541 aa11.52□□□□□ -0.57
RBFOX1-201ENST00000311745 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.57
RBFOX1-201ENST00000311745 ADCY9O60503 1353 aa11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 PNMA6EA0A0J9YXQ4 647 aa11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 ZBTB12Q9Y330 459 aaPredicted RBP11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 LAMB4A4D0S4 1761 aa11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 IRF6O14896 467 aa11.51□□□□□ -0.57
RBFOX1-201ENST00000311745 PSME1Q06323 249 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 SEMA3FQ13275 785 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 CT47A1Q5JQC4 288 aaPredicted RBP11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 RSPH14Q9UHP6 348 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 KCNH5Q8NCM2 988 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 DDX17Q92841 729 aaKnown RBP11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 SNX21Q969T3 373 aa11.5□□□□□ -0.57
RBFOX1-201ENST00000311745 OSBPL3Q9H4L5 887 aa11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 ARFGEF2Q9Y6D5 1785 aa11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 IBTKQ9P2D0 1353 aaPredicted RBP11.49□□□□□ -0.57
RBFOX1-201ENST00000311745 PRAMEF22A3QJZ6 481 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 TMEM94Q12767 1356 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 MCCP23508 829 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 AKAP4Q5JQC9 854 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 YY1AP1Q9H869 796 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 ERBB3P21860 1342 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 CCDC30Q5VVM6 783 aa11.48□□□□□ -0.57
RBFOX1-201ENST00000311745 RNMTO43148 476 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 SDSP20132 328 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 KRT28Q7Z3Y7 464 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 ANKRD24Q8TF21 1146 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 MYCBPQ99417 103 aaPredicted RBP11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 TJP1Q07157 1748 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
RBFOX1-201ENST00000311745 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.57
RBFOX1-201ENST00000311745 ATP8B2P98198 1209 aa11.46□□□□□ -0.57
RBFOX1-201ENST00000311745 POLA2Q14181 598 aa11.46□□□□□ -0.57
RBFOX1-201ENST00000311745 C19orf44Q9H6X5 657 aa11.46□□□□□ -0.57
RBFOX1-201ENST00000311745 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 PDIA6Q15084 440 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 BEND3Q5T5X7 828 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 MPRIPQ6WCQ1 1025 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 USP26Q9BXU7 913 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 NOL7Q9UMY1 257 aaKnown RBP11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 SH3BP1Q9Y3L3 701 aa11.46□□□□□ -0.58
RBFOX1-201ENST00000311745 ZNF500O60304 480 aaPredicted RBP11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 HOXB7P09629 217 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 SLC4A10Q6U841 1118 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 MYRIPQ8NFW9 859 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 TNS3Q68CZ2 1445 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 NHSL1Q5SYE7 1610 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 CDC45O75419 566 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 CLSTN1O94985 981 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 LRP10Q7Z4F1 713 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 PPP1R9BQ96SB3 815 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
RBFOX1-201ENST00000311745 PDE1AP54750 535 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 PROSER2Q86WR7 435 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 SSH3Q8TE77 659 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 FEZ2Q9UHY8 353 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 GNAI2P04899 355 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 IL25Q9H293 177 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 EXOC6BQ9Y2D4 811 aa11.44□□□□□ -0.58
RBFOX1-201ENST00000311745 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 NBPF7P0C2Y1 421 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 HDGFL1Q5TGJ6 251 aa11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 TSHZ3Q63HK5 1081 aa11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 ZNF530Q6P9A1 599 aaPredicted RBP11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 ANXA1P04083 346 aa11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 DNAJC5Q9H3Z4 198 aa11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 EFCC1Q9HA90 598 aa11.43□□□□□ -0.58
RBFOX1-201ENST00000311745 CHMP5Q9NZZ3 219 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms