RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 ATRIPQ8WXE1 791 aa13.99□□□□□ -0.17
PDE12-201ENST00000311180 MACROD2A1Z1Q3 448 aa13.99□□□□□ -0.17
PDE12-201ENST00000311180 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDE12-201ENST00000311180 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
PDE12-201ENST00000311180 VAV2P52735 878 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 NAA25Q14CX7 972 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 TMC6Q7Z403 805 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 MPNDQ8N594 471 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 STRN4Q9NRL3 753 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 FEZ2Q9UHY8 353 aaPredicted RBP13.98□□□□□ -0.17
PDE12-201ENST00000311180 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
PDE12-201ENST00000311180 HDXQ7Z353 690 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 VCXQ9H320 206 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 KLHL10Q6JEL2 608 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 CPLX4Q7Z7G2 160 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 TRIM7Q9C029 511 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 COMMD10Q9Y6G5 202 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 IBSPP21815 317 aaPredicted RBP13.98□□□□□ -0.17
PDE12-201ENST00000311180 GBP1P32455 592 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 MCM6Q14566 821 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
PDE12-201ENST00000311180 FGD6Q6ZV73 1430 aa13.98□□□□□ -0.17
PDE12-201ENST00000311180 ATAD2Q6PL18 1390 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
PDE12-201ENST00000311180 STMN1P16949 149 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 CROCCP2Q86T23 111 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 TBC1D5Q92609 795 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 TRERF1Q96PN7 1200 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 KRT86O43790 486 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 FAM76AQ8TAV0 307 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 HFM1A2PYH4 1435 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 WIZO95785 1651 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 ARID4AP29374 1257 aaPredicted RBP13.97□□□□□ -0.17
PDE12-201ENST00000311180 ERCC6LQ2NKX8 1250 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
PDE12-201ENST00000311180 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 CCDC14Q49A88 953 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 HDGFL1Q5TGJ6 251 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 SCLT1Q96NL6 688 aa13.97□□□□□ -0.17
PDE12-201ENST00000311180 GMNNO75496 209 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 CNGA1P29973 690 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 TSGA10Q9BZW7 698 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 TCP11L1Q9NUJ3 509 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDE12-201ENST00000311180 KRT83P78385 493 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 GABPB1Q06547 395 aaPredicted RBP13.96□□□□□ -0.17
PDE12-201ENST00000311180 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 AACSQ86V21 672 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 EHMT1Q9H9B1 1298 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 CWC27Q6UX04 472 aaKnown RBP13.96□□□□□ -0.17
PDE12-201ENST00000311180 CEP120Q8N960 986 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 SYTL4Q96C24 671 aaPredicted RBP13.96□□□□□ -0.17
PDE12-201ENST00000311180 MPHOSPH8Q99549 860 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
PDE12-201ENST00000311180 PPFIA2O75334 1257 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 MTHFSP49914 203 aa13.96□□□□□ -0.17
PDE12-201ENST00000311180 MTIF2P46199 727 aaKnown RBP13.96□□□□□ -0.18
PDE12-201ENST00000311180 NOLC1Q14978 699 aaKnown RBP eCLIP13.96□□□□□ -0.18
PDE12-201ENST00000311180 ARHGAP24Q8N264 748 aa13.96□□□□□ -0.18
PDE12-201ENST00000311180 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.18
PDE12-201ENST00000311180 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.18
PDE12-201ENST00000311180 CASQ2O14958 399 aaPredicted RBP13.96□□□□□ -0.18
PDE12-201ENST00000311180 HMOX1P09601 288 aa13.96□□□□□ -0.18
PDE12-201ENST00000311180 SF3B2Q13435 895 aaKnown RBP13.96□□□□□ -0.18
PDE12-201ENST00000311180 TNPO1Q92973 898 aaKnown RBP13.96□□□□□ -0.18
PDE12-201ENST00000311180 NOP2P46087 812 aaKnown RBP13.95□□□□□ -0.18
PDE12-201ENST00000311180 ZKSCAN5Q9Y2L8 839 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 FAM200AQ8TCP9 573 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 CALML4Q96GE6 196 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 HMG20BQ9P0W2 317 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 CIB2O75838 187 aa13.95□□□□□ -0.18
PDE12-201ENST00000311180 RPUSD2Q8IZ73 545 aaKnown RBP13.94□□□□□ -0.18
PDE12-201ENST00000311180 SUDS3Q9H7L9 328 aaPredicted RBP13.94□□□□□ -0.18
PDE12-201ENST00000311180 TERF1P54274 439 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 SLC4A2P04920 1241 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 CCDC102BQ68D86 513 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 ABCC11Q96J66 1382 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 MSH5O43196 834 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 PRPF4BQ13523 1007 aaKnown RBP13.94□□□□□ -0.18
PDE12-201ENST00000311180 CCDC38Q502W7 563 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
PDE12-201ENST00000311180 GBP7Q8N8V2 638 aaPredicted RBP13.94□□□□□ -0.18
PDE12-201ENST00000311180 MTRF1LQ9UGC7 380 aaKnown RBP13.94□□□□□ -0.18
PDE12-201ENST00000311180 STX6O43752 255 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 GPRASP1Q5JY77 1395 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 HDAC9Q9UKV0 1011 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 SKILP12757 684 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 ATP2B2Q01814 1243 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 CFAP58Q5T655 872 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
PDE12-201ENST00000311180 GIGYF1O75420 1035 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms