RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 GTF2F1P35269 517 aaKnown RBP eCLIP15.22■□□□□ 0.03
SNED1-201ENST00000310397 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
SNED1-201ENST00000310397 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
SNED1-201ENST00000310397 MIS18AQ9NYP9 233 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 GOLGA6L10A0A0M3HER8 536 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.03
SNED1-201ENST00000310397 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 CETN2P41208 172 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 STK11IPQ8N1F8 1099 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 ALS2CR12Q96Q35 445 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 TSG101Q99816 390 aa15.21■□□□□ 0.03
SNED1-201ENST00000310397 TFIP11Q9UBB9 837 aaKnown RBP15.21■□□□□ 0.03
SNED1-201ENST00000310397 GOLGA8BA8MQT2 603 aa15.21■□□□□ 0.02
SNED1-201ENST00000310397 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
SNED1-201ENST00000310397 SLC12A7Q9Y666 1083 aa15.2■□□□□ 0.02
SNED1-201ENST00000310397 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
SNED1-201ENST00000310397 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
SNED1-201ENST00000310397 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
SNED1-201ENST00000310397 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
SNED1-201ENST00000310397 SSRP1Q08945 709 aaKnown RBP15.2■□□□□ 0.02
SNED1-201ENST00000310397 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
SNED1-201ENST00000310397 PRIM1P49642 420 aaKnown RBP15.19■□□□□ 0.02
SNED1-201ENST00000310397 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
SNED1-201ENST00000310397 F6X3S4 739 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 IQCA1Q86XH1 822 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 GCOM1H8Y6P7 765 aaPredicted RBP15.19■□□□□ 0.02
SNED1-201ENST00000310397 MYZAPP0CAP1 466 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 LMAN1P49257 510 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 SSBP05455 408 aaKnown RBP eCLIP15.19■□□□□ 0.02
SNED1-201ENST00000310397 SKILP12757 684 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 IFFO1Q0D2I5 559 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 ANO6Q4KMQ2 910 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 NEK1Q96PY6 1258 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 PIK3C2GO75747 1445 aa15.19■□□□□ 0.02
SNED1-201ENST00000310397 GNG11P61952 73 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 CCDC91Q7Z6B0 441 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 FEZ1Q99689 392 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 ZMYM4Q5VZL5 1548 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 SEC63Q9UGP8 760 aaKnown RBP15.18■□□□□ 0.02
SNED1-201ENST00000310397 SEPT11Q9NVA2 429 aaKnown RBP15.18■□□□□ 0.02
SNED1-201ENST00000310397 TAOK3Q9H2K8 898 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 PRAG1Q86YV5 1406 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 ANKRD62A6NC57 917 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 UBASH3AP57075 661 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 WWC2Q6AWC2 1192 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 CTAGE1Q96RT6 745 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 KIF20AO95235 890 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 GUCY1B3Q02153 619 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 CTCFLQ8NI51 663 aaPredicted RBP15.18■□□□□ 0.02
SNED1-201ENST00000310397 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
SNED1-201ENST00000310397 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 ATP2B2Q01814 1243 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 STARD3NLO95772 234 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 CKAP4Q07065 602 aaKnown RBP15.17■□□□□ 0.02
SNED1-201ENST00000310397 ANKRD44Q8N8A2 993 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 DESP17661 470 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
SNED1-201ENST00000310397 POLR3AO14802 1390 aaPredicted RBP15.17■□□□□ 0.02
SNED1-201ENST00000310397 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 MBIPQ9NS73 344 aa15.17■□□□□ 0.02
SNED1-201ENST00000310397 POTEJP0CG39 1038 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 PDE1AP54750 535 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
SNED1-201ENST00000310397 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
SNED1-201ENST00000310397 TUBBP07437 444 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 CCDC12Q8WUD4 166 aaPredicted RBP15.16■□□□□ 0.02
SNED1-201ENST00000310397 CCDC175P0C221 793 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 A0A087WZG4 1122 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 SYKP43405 635 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 AMPD3Q01432 767 aa15.16■□□□□ 0.02
SNED1-201ENST00000310397 TOM1L2Q6ZVM7 507 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 BIN1O00499 593 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 TMEM132AQ24JP5 1023 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 CCDC8Q9H0W5 538 aaPredicted RBP15.15■□□□□ 0.02
SNED1-201ENST00000310397 TTF1Q15361 905 aaPredicted RBP15.15■□□□□ 0.02
SNED1-201ENST00000310397 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 TERF1P54274 439 aa15.15■□□□□ 0.02
SNED1-201ENST00000310397 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 CATIPQ7Z7H3 387 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 F13A1P00488 732 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 PIP4K2BP78356 416 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 TMEM266Q2M3C6 531 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 DDX54Q8TDD1 881 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 IARSP41252 1262 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNED1-201ENST00000310397 GPATCH8Q9UKJ3 1502 aaKnown RBP15.14■□□□□ 0.01
SNED1-201ENST00000310397 CCDC186Q7Z3E2 898 aa15.14■□□□□ 0.01
SNED1-201ENST00000310397 ADGRL1O94910 1474 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms