RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MX1P20591 662 aa26.22■■□□□ 1.79
ATG4D-201ENST00000309469 RHPN1Q8TCX5 695 aa26.22■■□□□ 1.79
ATG4D-201ENST00000309469 KIF1BPQ96EK5 621 aa26.22■■□□□ 1.79
ATG4D-201ENST00000309469 THRAP3Q9Y2W1 955 aaKnown RBP26.22■■□□□ 1.79
ATG4D-201ENST00000309469 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
ATG4D-201ENST00000309469 STAP2Q9UGK3 403 aa26.21■■□□□ 1.79
ATG4D-201ENST00000309469 UBAP1LF5GYI3 381 aa26.2■■□□□ 1.79
ATG4D-201ENST00000309469 EIF5BO60841 1220 aaKnown RBP26.2■■□□□ 1.79
ATG4D-201ENST00000309469 IL1RAPL2Q9NP60 686 aa26.2■■□□□ 1.79
ATG4D-201ENST00000309469 RBM25P49756 843 aaKnown RBP26.2■■□□□ 1.78
ATG4D-201ENST00000309469 BECN1Q14457 450 aa26.2■■□□□ 1.78
ATG4D-201ENST00000309469 VSIG10Q8N0Z9 540 aa26.2■■□□□ 1.78
ATG4D-201ENST00000309469 BICC1Q9H694 974 aaKnown RBP26.2■■□□□ 1.78
ATG4D-201ENST00000309469 TEX13AQ9BXU3 409 aaPredicted RBP26.19■■□□□ 1.78
ATG4D-201ENST00000309469 NRAPQ86VF7 1730 aa26.18■■□□□ 1.78
ATG4D-201ENST00000309469 LRP6O75581 1613 aa26.18■■□□□ 1.78
ATG4D-201ENST00000309469 TTLL7Q6ZT98 887 aa26.18■■□□□ 1.78
ATG4D-201ENST00000309469 BCL9O00512 1426 aa26.17■■□□□ 1.78
ATG4D-201ENST00000309469 TSHZ3Q63HK5 1081 aa26.16■■□□□ 1.78
ATG4D-201ENST00000309469 WNK3Q9BYP7 1800 aa26.16■■□□□ 1.78
ATG4D-201ENST00000309469 AOX1Q06278 1338 aa26.16■■□□□ 1.78
ATG4D-201ENST00000309469 ATP5J2-PTCD1G3V325 749 aa26.16■■□□□ 1.78
ATG4D-201ENST00000309469 OS9Q13438 667 aaPredicted RBP26.16■■□□□ 1.78
ATG4D-201ENST00000309469 CASC1Q6TDU7 716 aa26.16■■□□□ 1.78
ATG4D-201ENST00000309469 SPATA31A5Q5VU36 1347 aa26.15■■□□□ 1.78
ATG4D-201ENST00000309469 SPATA31A7Q8IWB4 1347 aa26.15■■□□□ 1.78
ATG4D-201ENST00000309469 ARFGEF2Q9Y6D5 1785 aa26.15■■□□□ 1.78
ATG4D-201ENST00000309469 DDB1Q16531 1140 aa26.14■■□□□ 1.78
ATG4D-201ENST00000309469 NUTM1Q86Y26 1132 aa26.14■■□□□ 1.78
ATG4D-201ENST00000309469 DNAJC10Q8IXB1 793 aa26.14■■□□□ 1.78
ATG4D-201ENST00000309469 RBM42Q9BTD8 480 aaKnown RBP26.14■■□□□ 1.78
ATG4D-201ENST00000309469 SLIT2O94813 1529 aa26.14■■□□□ 1.77
ATG4D-201ENST00000309469 PA2G4Q9UQ80 394 aaKnown RBP26.14■■□□□ 1.77
ATG4D-201ENST00000309469 ERC1Q8IUD2 1116 aa26.13■■□□□ 1.77
ATG4D-201ENST00000309469 ITGB4P16144 1822 aa26.13■■□□□ 1.77
ATG4D-201ENST00000309469 A0A087WZG4 1122 aa26.12■■□□□ 1.77
ATG4D-201ENST00000309469 STARD3NLO95772 234 aa26.12■■□□□ 1.77
ATG4D-201ENST00000309469 EPHA10Q5JZY3 1008 aa26.12■■□□□ 1.77
ATG4D-201ENST00000309469 SYTL4Q96C24 671 aaPredicted RBP26.12■■□□□ 1.77
ATG4D-201ENST00000309469 COL15A1P39059 1388 aa26.11■■□□□ 1.77
ATG4D-201ENST00000309469 PRIM1P49642 420 aaKnown RBP26.11■■□□□ 1.77
ATG4D-201ENST00000309469 UBE3BQ7Z3V4 1068 aa26.11■■□□□ 1.77
ATG4D-201ENST00000309469 JARID2Q92833 1246 aaPredicted RBP26.11■■□□□ 1.77
ATG4D-201ENST00000309469 BARGINQ6ZT62 677 aa26.1■■□□□ 1.77
ATG4D-201ENST00000309469 TBC1D2Q9BYX2 928 aa26.1■■□□□ 1.77
ATG4D-201ENST00000309469 ZBTB3Q9H5J0 574 aa26.1■■□□□ 1.77
ATG4D-201ENST00000309469 CCDC9Q9Y3X0 531 aaKnown RBP26.1■■□□□ 1.77
ATG4D-201ENST00000309469 CASP7P55210 303 aa26.1■■□□□ 1.77
ATG4D-201ENST00000309469 NWD2Q9ULI1 1742 aa26.09■■□□□ 1.77
ATG4D-201ENST00000309469 CLASRPQ8N2M8 674 aaKnown RBP26.09■■□□□ 1.77
ATG4D-201ENST00000309469 H7C1W4 665 aa26.08■■□□□ 1.77
ATG4D-201ENST00000309469 G3BP1Q13283 466 aaKnown RBP eCLIP26.08■■□□□ 1.77
ATG4D-201ENST00000309469 NBR1Q14596 966 aa26.08■■□□□ 1.77
ATG4D-201ENST00000309469 CWC25Q9NXE8 425 aaPredicted RBP26.08■■□□□ 1.77
ATG4D-201ENST00000309469 RABL6Q3YEC7 729 aaPredicted RBP26.08■■□□□ 1.76
ATG4D-201ENST00000309469 SLC4A9Q96Q91 983 aa26.08■■□□□ 1.76
ATG4D-201ENST00000309469 AFDNP55196 1824 aaKnown RBP26.07■■□□□ 1.76
ATG4D-201ENST00000309469 JCADQ9P266 1359 aa26.07■■□□□ 1.76
ATG4D-201ENST00000309469 NUP188Q5SRE5 1749 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 TRIM6-TRIM34B2RNG4 842 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 UNC5CLQ8IV45 518 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 PI4K2BQ8TCG2 481 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 USP42Q9H9J4 1324 aaKnown RBP26.06■■□□□ 1.76
ATG4D-201ENST00000309469 MARCH10Q8NA82 808 aaPredicted RBP26.06■■□□□ 1.76
ATG4D-201ENST00000309469 CCDC191Q8NCU4 936 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 RILPL2Q969X0 211 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 KIF2CQ99661 725 aa26.06■■□□□ 1.76
ATG4D-201ENST00000309469 SASH1O94885 1247 aa26.05■■□□□ 1.76
ATG4D-201ENST00000309469 CYP19A1P11511 503 aaPredicted RBP26.05■■□□□ 1.76
ATG4D-201ENST00000309469 USP26Q9BXU7 913 aa26.05■■□□□ 1.76
ATG4D-201ENST00000309469 ZNF330Q9Y3S2 320 aaPredicted RBP26.04■■□□□ 1.76
ATG4D-201ENST00000309469 ERC2O15083 957 aa26.04■■□□□ 1.76
ATG4D-201ENST00000309469 COPRSQ9NQ92 184 aa26.04■■□□□ 1.76
ATG4D-201ENST00000309469 TTC41PQ6P2S7 1318 aa26.04■■□□□ 1.76
ATG4D-201ENST00000309469 REC8O95072 547 aa26.03■■□□□ 1.76
ATG4D-201ENST00000309469 RFX5P48382 616 aaPredicted RBP26.03■■□□□ 1.76
ATG4D-201ENST00000309469 KIF6Q6ZMV9 814 aa26.03■■□□□ 1.76
ATG4D-201ENST00000309469 NGLY1Q96IV0 654 aa26.03■■□□□ 1.76
ATG4D-201ENST00000309469 TUBGCP6Q96RT7 1819 aa26.03■■□□□ 1.76
ATG4D-201ENST00000309469 TCIRG1Q13488 830 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 KLHDC4Q8TBB5 520 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 C8orf37Q96NL8 207 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 ISCA1Q9BUE6 129 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 SIL1Q9H173 461 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 DOT1LQ8TEK3 1739 aa26.02■■□□□ 1.76
ATG4D-201ENST00000309469 IFIT2P09913 472 aaKnown RBP26.02■■□□□ 1.76
ATG4D-201ENST00000309469 CHMLP26374 656 aa26.01■■□□□ 1.75
ATG4D-201ENST00000309469 FOXO4P98177 505 aa26.01■■□□□ 1.75
ATG4D-201ENST00000309469 AACSQ86V21 672 aa26■■□□□ 1.75
ATG4D-201ENST00000309469 SNX21Q969T3 373 aa26■■□□□ 1.75
ATG4D-201ENST00000309469 PTPN12Q05209 780 aaKnown RBP26■■□□□ 1.75
ATG4D-201ENST00000309469 TRIM28Q13263 835 aaKnown RBP26■■□□□ 1.75
ATG4D-201ENST00000309469 VPS72Q15906 364 aa26■■□□□ 1.75
ATG4D-201ENST00000309469 ACSBG1Q96GR2 724 aa26■■□□□ 1.75
ATG4D-201ENST00000309469 ECHDC1Q9NTX5 307 aa26■■□□□ 1.75
ATG4D-201ENST00000309469 GLRX3O76003 335 aaKnown RBP25.99■■□□□ 1.75
ATG4D-201ENST00000309469 LMBR1LQ6UX01 489 aa25.99■■□□□ 1.75
ATG4D-201ENST00000309469 GPATCH3Q96I76 525 aa25.99■■□□□ 1.75
ATG4D-201ENST00000309469 ESYT1Q9BSJ8 1104 aa25.99■■□□□ 1.75
ATG4D-201ENST00000309469 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms