RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 PHF23Q9BUL5 403 aaPredicted RBP11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 NEK1Q96PY6 1258 aa11.57□□□□□ -0.56
TMOD3-201ENST00000308580 ARHGEF12Q9NZN5 1544 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 ADAMTS12P58397 1594 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 MKNK2Q9HBH9 465 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 CEP131Q9UPN4 1083 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 SHANK2Q9UPX8 1470 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 CTCFLQ8NI51 663 aaPredicted RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 ESYT1Q9BSJ8 1104 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 BMP2KQ9NSY1 1161 aaPredicted RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 PATL2C9JE40 543 aaKnown RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 RAB11FIP4Q86YS3 637 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
TMOD3-201ENST00000308580 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 NPATQ14207 1427 aa11.56□□□□□ -0.56
TMOD3-201ENST00000308580 KLHL40Q2TBA0 621 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 SMC5Q8IY18 1101 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 SFPQP23246 707 aaKnown RBP eCLIP11.55□□□□□ -0.56
TMOD3-201ENST00000308580 EYA1Q99502 592 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 ABCC10Q5T3U5 1492 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 FLT4P35916 1363 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 KLHL10Q6JEL2 608 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 KSR2Q6VAB6 950 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 IQCA1Q86XH1 822 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 DZIP1Q86YF9 867 aaKnown RBP11.55□□□□□ -0.56
TMOD3-201ENST00000308580 NECAB1Q8N987 351 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 ANKIB1Q9P2G1 1089 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 GRM8O00222 908 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 NOM1Q5C9Z4 860 aaKnown RBP11.55□□□□□ -0.56
TMOD3-201ENST00000308580 FSIP1Q8NA03 581 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 BRF1Q92994 677 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 AKAP4Q5JQC9 854 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 CEP85Q6P2H3 762 aa11.55□□□□□ -0.56
TMOD3-201ENST00000308580 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
TMOD3-201ENST00000308580 CTTNBP2Q8WZ74 1663 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 DDX19AQ9NUU7 478 aaKnown RBP11.54□□□□□ -0.56
TMOD3-201ENST00000308580 LMBR1LQ6UX01 489 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
TMOD3-201ENST00000308580 RNF41Q9H4P4 317 aaPredicted RBP11.54□□□□□ -0.56
TMOD3-201ENST00000308580 HMG20BQ9P0W2 317 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 ORC3Q9UBD5 711 aaPredicted RBP11.54□□□□□ -0.56
TMOD3-201ENST00000308580 CFAP43Q8NDM7 1665 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 SYCP1Q15431 976 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 MICU3Q86XE3 530 aa11.54□□□□□ -0.56
TMOD3-201ENST00000308580 EIF5P55010 431 aaKnown RBP11.53□□□□□ -0.56
TMOD3-201ENST00000308580 LUC7LQ9NQ29 371 aaKnown RBP11.53□□□□□ -0.56
TMOD3-201ENST00000308580 SEC24BO95487 1268 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 MAP3K19Q56UN5 1328 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 SKIDA1Q1XH10 827 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 TMEM132AQ24JP5 1023 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 LRRC2Q9BYS8 371 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 RBM8AQ9Y5S9 174 aaKnown RBP11.53□□□□□ -0.56
TMOD3-201ENST00000308580 IARSP41252 1262 aaKnown RBP11.53□□□□□ -0.56
TMOD3-201ENST00000308580 LINS1Q8NG48 757 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 BIN1O00499 593 aa11.53□□□□□ -0.56
TMOD3-201ENST00000308580 ARHGAP29Q52LW3 1261 aa11.52□□□□□ -0.56
TMOD3-201ENST00000308580 ZCRB1Q8TBF4 217 aaKnown RBP11.52□□□□□ -0.56
TMOD3-201ENST00000308580 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.56
TMOD3-201ENST00000308580 EPB41L2O43491 1005 aaKnown RBP11.52□□□□□ -0.56
TMOD3-201ENST00000308580 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.56
TMOD3-201ENST00000308580 AXDND1Q5T1B0 1012 aaPredicted RBP11.52□□□□□ -0.56
TMOD3-201ENST00000308580 NGLY1Q96IV0 654 aa11.52□□□□□ -0.56
TMOD3-201ENST00000308580 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 CTAGE5O15320 804 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 TTF1Q15361 905 aaPredicted RBP11.52□□□□□ -0.57
TMOD3-201ENST00000308580 EIF2AK4Q9P2K8 1649 aaKnown RBP11.52□□□□□ -0.57
TMOD3-201ENST00000308580 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
TMOD3-201ENST00000308580 TMEM67Q5HYA8 995 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 ZNF76P36508 570 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 DISP1Q96F81 1524 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 ANAPC15P60006 121 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 UBE2HP62256 183 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 CCDC181Q5TID7 509 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 PDCL3Q9H2J4 239 aa11.52□□□□□ -0.57
TMOD3-201ENST00000308580 SEC63Q9UGP8 760 aaKnown RBP11.52□□□□□ -0.57
TMOD3-201ENST00000308580 ZSCAN22P10073 491 aaPredicted RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 PLEKHM2Q8IWE5 1019 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 CNNM3Q8NE01 707 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 NCOA7Q8NI08 942 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 SNX21Q969T3 373 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 YTHDC2Q9H6S0 1430 aaKnown RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 PANK2Q9BZ23 570 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 ZNF165P49910 485 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
TMOD3-201ENST00000308580 PTPN14Q15678 1187 aa11.51□□□□□ -0.57
TMOD3-201ENST00000308580 NFATC2IPQ8NCF5 419 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms