RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
ALCAM-201ENST00000306107 LINS1Q8NG48 757 aa16.54■□□□□ 0.24
ALCAM-201ENST00000306107 KINO60870 393 aaKnown RBP16.54■□□□□ 0.24
ALCAM-201ENST00000306107 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
ALCAM-201ENST00000306107 EYA3Q99504 573 aa16.54■□□□□ 0.24
ALCAM-201ENST00000306107 TSPY2A6NKD2 308 aa16.54■□□□□ 0.24
ALCAM-201ENST00000306107 PRPF40BQ6NWY9 871 aaKnown RBP16.54■□□□□ 0.24
ALCAM-201ENST00000306107 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
ALCAM-201ENST00000306107 A1BGP04217 495 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 ODF2Q5BJF6 829 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 LARP1BQ659C4 914 aaKnown RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 DDX11Q96FC9 970 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 SCLT1Q96NL6 688 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 STX8Q9UNK0 236 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 UPF3BQ9BZI7 483 aaKnown RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 MSL1Q68DK7 614 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 TRMT1LQ7Z2T5 733 aaKnown RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
ALCAM-201ENST00000306107 JAG2Q9Y219 1238 aa16.53■□□□□ 0.24
ALCAM-201ENST00000306107 PICALMQ13492 652 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 VAT1LQ9HCJ6 419 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 ZNF804AQ7Z570 1209 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 MEIS3Q99687 375 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 MAP3K5Q99683 1374 aa16.52■□□□□ 0.24
ALCAM-201ENST00000306107 IFIT3O14879 490 aaKnown RBP16.52■□□□□ 0.23
ALCAM-201ENST00000306107 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.23
ALCAM-201ENST00000306107 PLEKHG3A1L390 1219 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 CYP7A1P22680 504 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 C20orf194Q5TEA3 1177 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 H0YIN7 160 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 ALDH1L1O75891 902 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 BMP2KQ9NSY1 1161 aaPredicted RBP16.51■□□□□ 0.23
ALCAM-201ENST00000306107 IL16Q14005 1332 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
ALCAM-201ENST00000306107 ME1P48163 572 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 HAND2P61296 217 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 GSTO1P78417 241 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
ALCAM-201ENST00000306107 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
ALCAM-201ENST00000306107 TRIM37O94972 964 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 PDE4BQ07343 736 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 CRNKL1Q9BZJ0 848 aaKnown RBP16.5■□□□□ 0.23
ALCAM-201ENST00000306107 SHANK2Q9UPX8 1470 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 SH3TC1Q8TE82 1336 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 ZGPATQ8N5A5 531 aaKnown RBP16.5■□□□□ 0.23
ALCAM-201ENST00000306107 BCS1LQ9Y276 419 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 NAP1L1P55209 391 aaKnown RBP16.5■□□□□ 0.23
ALCAM-201ENST00000306107 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 CCDC196A0A1B0GTZ2 297 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 TNIP1Q15025 636 aa16.5■□□□□ 0.23
ALCAM-201ENST00000306107 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.23
ALCAM-201ENST00000306107 NAA16Q6N069 864 aaPredicted RBP16.49■□□□□ 0.23
ALCAM-201ENST00000306107 IL15P40933 162 aaPredicted RBP16.49■□□□□ 0.23
ALCAM-201ENST00000306107 LARGE2Q8N3Y3 721 aa16.49■□□□□ 0.23
ALCAM-201ENST00000306107 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
ALCAM-201ENST00000306107 CUL5Q93034 780 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 TSHZ3Q63HK5 1081 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 WASF1Q92558 559 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 RBM17Q96I25 401 aaKnown RBP16.48■□□□□ 0.23
ALCAM-201ENST00000306107 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 PDCL3Q9H2J4 239 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 SLC12A7Q9Y666 1083 aa16.48■□□□□ 0.23
ALCAM-201ENST00000306107 ABCA5Q8WWZ7 1642 aa16.47■□□□□ 0.23
ALCAM-201ENST00000306107 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.232e-8■■■■■ 34.1
ALCAM-201ENST00000306107 SBNO1A3KN83 1393 aa16.47■□□□□ 0.23
ALCAM-201ENST00000306107 PARP10Q53GL7 1025 aa16.47■□□□□ 0.23
ALCAM-201ENST00000306107 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
ALCAM-201ENST00000306107 NKTRP30414 1462 aaKnown RBP16.47■□□□□ 0.23
ALCAM-201ENST00000306107 TSPYL6Q8N831 410 aa16.46■□□□□ 0.23
ALCAM-201ENST00000306107 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
ALCAM-201ENST00000306107 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
ALCAM-201ENST00000306107 BRPF1P55201 1214 aaPredicted RBP16.46■□□□□ 0.23
ALCAM-201ENST00000306107 ZNF496Q96IT1 587 aaPredicted RBP16.46■□□□□ 0.23
ALCAM-201ENST00000306107 UFL1O94874 794 aa16.46■□□□□ 0.23
ALCAM-201ENST00000306107 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
ALCAM-201ENST00000306107 EVI5LQ96CN4 794 aa16.46■□□□□ 0.23
ALCAM-201ENST00000306107 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 ANKRD2Q9GZV1 360 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 EIF6P56537 245 aaKnown RBP16.45■□□□□ 0.22
ALCAM-201ENST00000306107 SLC9C2Q5TAH2 1124 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 FAM196AQ6ZSG2 479 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 MFSD6Q6ZSS7 791 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 SLC52A2Q9HAB3 445 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 RALGAPBQ86X10 1494 aa16.45■□□□□ 0.22
ALCAM-201ENST00000306107 DEKP35659 375 aaKnown RBP16.44■□□□□ 0.22
ALCAM-201ENST00000306107 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
ALCAM-201ENST00000306107 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
ALCAM-201ENST00000306107 NAT10Q9H0A0 1025 aaKnown RBP16.44■□□□□ 0.22
ALCAM-201ENST00000306107 HOMER1Q86YM7 354 aa16.44■□□□□ 0.22
ALCAM-201ENST00000306107 DHX8Q14562 1220 aaKnown RBP16.44■□□□□ 0.22
ALCAM-201ENST00000306107 VTI1AQ96AJ9 217 aa16.44■□□□□ 0.22
ALCAM-201ENST00000306107 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
ALCAM-201ENST00000306107 FAM13BQ9NYF5 915 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms