RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CRCPO75575 148 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 STX1AQ16623 288 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 POLR3DP05423 398 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-201ENST00000306085 USP25Q9UHP3 1055 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 GNG11P61952 73 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 DACT3Q96B18 629 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-201ENST00000306085 NUF2Q9BZD4 464 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GJC1P36383 396 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GUCY1B3Q02153 619 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 TTLL12Q14166 644 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 ATP11AP98196 1134 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC110Q8TBZ0 833 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 TMEM110-MUSTN1A8MSY1 372 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 ABCF2Q9UG63 623 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SELENOOQ9BVL4 669 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 VCX3BQ9H321 246 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 NEMFO60524 1076 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 ADCY5O95622 1261 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 GEN1Q17RS7 908 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 ISM2Q6H9L7 571 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 HDGFL1Q5TGJ6 251 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 OPA1O60313 960 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TTC12Q9H892 705 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■■ 39.6
TRIM56-201ENST00000306085 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 MKNK2Q9HBH9 465 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 PCK1P35558 622 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 KIF20AO95235 890 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TXNDC16Q9P2K2 825 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 A0A087WZG4 1122 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 STMN1P16949 149 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 GOLGA8BA8MQT2 603 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CABP4P57796 275 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 SAMD15Q9P1V8 674 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 EBAG9O00559 213 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 TTC21AQ8NDW8 1320 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 SCAND2PQ9GZW5 306 aaPredicted RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 KCNK9Q9NPC2 374 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 C10orf67Q8IYJ2 551 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CALML4Q96GE6 196 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 ATP2A1O14983 1001 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE5O15320 804 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
TRIM56-201ENST00000306085 BUB1BO60566 1050 aaPredicted RBP15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 PSMD6Q15008 389 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 VPS18Q9P253 973 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 SRGAP3O43295 1099 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC194A0A1B0GVG4 234 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE9A4FU28 777 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 HSPA1LP34931 641 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCT6BQ92526 530 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 TSR2Q969E8 191 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 PLEKHO1Q53GL0 409 aaPredicted RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE6Q86UF2 777 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC14Q49A88 953 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 ALDH3A1P30838 453 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms