RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CRCPO75575 148 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 STX1AQ16623 288 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 POLR3DP05423 398 aaPredicted RBP15.35■□□□□ 0.05
TRIM56-201ENST00000306085 USP25Q9UHP3 1055 aa15.35■□□□□ 0.05
TRIM56-201ENST00000306085 GNG11P61952 73 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 DACT3Q96B18 629 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-201ENST00000306085 NUF2Q9BZD4 464 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GJC1P36383 396 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 TRIM7Q9C029 511 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GUCY1B3Q02153 619 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 TTLL12Q14166 644 aaPredicted RBP15.34■□□□□ 0.05
TRIM56-201ENST00000306085 GOLGA6L9A6NEM1 432 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 C8orf76Q96K31 380 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 RABGAP1Q9Y3P9 1069 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 ZNF287Q9HBT7 754 aa15.34■□□□□ 0.05
TRIM56-201ENST00000306085 ATP11AP98196 1134 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC110Q8TBZ0 833 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 TMEM110-MUSTN1A8MSY1 372 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 LRSAM1Q6UWE0 723 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CCDC129Q6ZRS4 1044 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 CPLX4Q7Z7G2 160 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 ABCF2Q9UG63 623 aa15.33■□□□□ 0.05
TRIM56-201ENST00000306085 U3KPZ7 1027 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SAMM50Q9Y512 469 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SELENOOQ9BVL4 669 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 VCX3BQ9H321 246 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 NEMFO60524 1076 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 ADCY5O95622 1261 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 GEN1Q17RS7 908 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 ISM2Q6H9L7 571 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 HDGFL1Q5TGJ6 251 aa15.33■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC85AQ96PX6 553 aaPredicted RBP15.33■□□□□ 0.04
TRIM56-201ENST00000306085 LACTBP83111 547 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 OPA1O60313 960 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TTC12Q9H892 705 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■■■ 39.6
TRIM56-201ENST00000306085 CCDC50Q8IVM0 306 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 MKNK2Q9HBH9 465 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 PCK1P35558 622 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 KIF20AO95235 890 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
TRIM56-201ENST00000306085 TXNDC16Q9P2K2 825 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 A0A087WZG4 1122 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 STMN1P16949 149 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 SETDB1Q15047 1291 aa15.32■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC77Q9BR77 488 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 GOLGA8AA7E2F4 631 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 GOLGA8BA8MQT2 603 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CABP4P57796 275 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 RSPH3Q86UC2 560 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CHD1LQ86WJ1 897 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 ABTB2Q8N961 1025 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 SAMD15Q9P1V8 674 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 LUC7L2Q9Y383 392 aaKnown RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 PAXBP1Q9Y5B6 917 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 EBAG9O00559 213 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 TTC21AQ8NDW8 1320 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 SCAND2PQ9GZW5 306 aaPredicted RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 KCNK9Q9NPC2 374 aa15.31■□□□□ 0.04
TRIM56-201ENST00000306085 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
TRIM56-201ENST00000306085 C10orf67Q8IYJ2 551 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CALML4Q96GE6 196 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 ATP2A1O14983 1001 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE5O15320 804 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 FSIP1Q8NA03 581 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
TRIM56-201ENST00000306085 BUB1BO60566 1050 aaPredicted RBP15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC25Q86WR0 208 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 PSMD6Q15008 389 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 GGNBP2Q9H3C7 697 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 VPS18Q9P253 973 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 SRGAP3O43295 1099 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC194A0A1B0GVG4 234 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE9A4FU28 777 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 HSPA1LP34931 641 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 CCT6BQ92526 530 aa15.3■□□□□ 0.04
TRIM56-201ENST00000306085 TSR2Q969E8 191 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 SLC12A7Q9Y666 1083 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 SSRP1Q08945 709 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 PLEKHO1Q53GL0 409 aaPredicted RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CTAGE6Q86UF2 777 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC14Q49A88 953 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 RANBP6O60518 1105 aaKnown RBP15.29■□□□□ 0.04
TRIM56-201ENST00000306085 CCDC172P0C7W6 258 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
TRIM56-201ENST00000306085 ALDH3A1P30838 453 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms