RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 H0YIN7 160 aa10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 DSG3P32926 999 aa10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.82e-13■□□□□ 10.4
TM4SF1-201ENST00000305366 TTLL6Q8N841 843 aa10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 A0A087WZG4 1122 aa10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 APLP1P51693 650 aa10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 EIF5P55010 431 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 NOP58Q9Y2X3 529 aaKnown RBP10.06□□□□□ -0.8
TM4SF1-201ENST00000305366 KDM2BQ8NHM5 1336 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 SLFN5Q08AF3 891 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 MCM10Q7L590 875 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 FMNL2Q96PY5 1086 aa10.05□□□□□ -0.8
TM4SF1-201ENST00000305366 C21orf2O43822 256 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 RTF1Q92541 710 aaKnown RBP10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 IPO9Q96P70 1041 aaKnown RBP10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 TEX13AQ9BXU3 409 aaPredicted RBP10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 USP16Q9Y5T5 823 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 C4AP0C0L4 1744 aa10.04□□□□□ -0.8
TM4SF1-201ENST00000305366 FAM177BA6PVY3 158 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 PRELPP51888 382 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 MIS18AQ9NYP9 233 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 CARMIL3Q8ND23 1372 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 HEG1Q9ULI3 1381 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 N4BP2Q86UW6 1770 aaPredicted RBP10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 PLIN1O60240 522 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 LMNB1P20700 586 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 CHRDL2Q6WN34 429 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 DZIP3Q86Y13 1208 aaKnown RBP10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 RBM46Q8TBY0 533 aaKnown RBP10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 RSPH6AQ9H0K4 717 aa10.03□□□□□ -0.8
TM4SF1-201ENST00000305366 PDE6BP35913 854 aa10.02□□□□□ -0.81
TM4SF1-201ENST00000305366 PRR5LQ6MZQ0 368 aa10.02□□□□□ -0.81
TM4SF1-201ENST00000305366 MYH14Q7Z406 1995 aaKnown RBP10.02□□□□□ -0.81
TM4SF1-201ENST00000305366 E9PSI1 815 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 ZBTB22O15209 634 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 PDIA4P13667 645 aaKnown RBP10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 IL6STP40189 918 aaPredicted RBP10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 DNAJC5GQ8N7S2 189 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 NFKBIEO00221 500 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 CAMTA2O94983 1202 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 PDE4AP27815 886 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 CNBD1Q8NA66 436 aa10.01□□□□□ -0.81
TM4SF1-201ENST00000305366 GLTPD2A6NH11 291 aa10□□□□□ -0.81
TM4SF1-201ENST00000305366 APAF1O14727 1248 aa10□□□□□ -0.81
TM4SF1-201ENST00000305366 SNRPA1P09661 255 aaKnown RBP10□□□□□ -0.81
TM4SF1-201ENST00000305366 ST5P78524 1137 aa10□□□□□ -0.81
TM4SF1-201ENST00000305366 ERFEQ4G0M1 354 aa10□□□□□ -0.81
TM4SF1-201ENST00000305366 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
TM4SF1-201ENST00000305366 NBPF5PQ86XG9 351 aaPredicted RBP10□□□□□ -0.81
TM4SF1-201ENST00000305366 COL5A3P25940 1745 aaPredicted RBP9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 TJP1Q07157 1748 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 VEGFAP15692 232 aaPredicted RBP9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 FSTL1Q12841 308 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 C20orf194Q5TEA3 1177 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 DPY19L2Q6NUT2 758 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 SMC1BQ8NDV3 1235 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 MRC1P22897 1456 aa9.99□□□□□ -0.81
TM4SF1-201ENST00000305366 CCDC146Q8IYE0 955 aa9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 ZNF831Q5JPB2 1677 aa9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 NEFMP07197 916 aa9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 ZBTB47Q9UFB7 747 aaPredicted RBP9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 NIP7Q9Y221 180 aaKnown RBP eCLIP9.98□□□□□ -0.81
TM4SF1-201ENST00000305366 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 KIAA1551Q9HCM1 1747 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 DDNO94850 711 aaPredicted RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 SRGNP10124 158 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 TAF7Q15545 349 aaPredicted RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 PRPF40BQ6NWY9 871 aaKnown RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 NBPF10Q6P3W6 841 aaKnown RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 KLRG1Q96E93 195 aa9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 RRP7AQ9Y3A4 280 aaKnown RBP9.97□□□□□ -0.81
TM4SF1-201ENST00000305366 HLFQ16534 295 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 OLFM4Q6UX06 510 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 MASTLQ96GX5 879 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 TAOK3Q9H2K8 898 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 SPINK5Q9NQ38 1064 aaPredicted RBP9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 ZNF652Q9Y2D9 606 aa9.96□□□□□ -0.81
TM4SF1-201ENST00000305366 POTECB2RU33 542 aa9.96□□□□□ -0.82
TM4SF1-201ENST00000305366 MYL6BP14649 208 aa9.96□□□□□ -0.82
TM4SF1-201ENST00000305366 STYK1Q6J9G0 422 aa9.96□□□□□ -0.82
TM4SF1-201ENST00000305366 WWC1Q8IX03 1113 aa9.96□□□□□ -0.82
TM4SF1-201ENST00000305366 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms