RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 FOXO3O43524 673 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 BMS1Q14692 1282 aaKnown RBP15.34■□□□□ 0.05
TRIM35-201ENST00000305364 TMCO3Q6UWJ1 677 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 RAD50Q92878 1312 aa15.34■□□□□ 0.05
TRIM35-201ENST00000305364 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.05
TRIM35-201ENST00000305364 ELF2Q15723 593 aa15.33■□□□□ 0.05
TRIM35-201ENST00000305364 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.05
TRIM35-201ENST00000305364 SLU7O95391 586 aaKnown RBP15.33■□□□□ 0.04
TRIM35-201ENST00000305364 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
TRIM35-201ENST00000305364 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.04
TRIM35-201ENST00000305364 SNW1Q13573 536 aaKnown RBP15.33■□□□□ 0.04
TRIM35-201ENST00000305364 EIF4A2Q14240 407 aaKnown RBP15.33■□□□□ 0.04
TRIM35-201ENST00000305364 RASEFQ8IZ41 740 aa15.33■□□□□ 0.04
TRIM35-201ENST00000305364 CHMP4AQ9BY43 222 aa15.33■□□□□ 0.04
TRIM35-201ENST00000305364 MTMR6Q9Y217 621 aa15.33■□□□□ 0.04
TRIM35-201ENST00000305364 KIF2AO00139 706 aaPredicted RBP15.32■□□□□ 0.04
TRIM35-201ENST00000305364 ZNF215Q9UL58 517 aaPredicted RBP15.32■□□□□ 0.04
TRIM35-201ENST00000305364 CCDC69A6NI79 296 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 PIK3R4Q99570 1358 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 SFPQP23246 707 aaKnown RBP eCLIP15.32■□□□□ 0.04
TRIM35-201ENST00000305364 TTC6Q86TZ1 520 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 SIL1Q9H173 461 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 KCNF1Q9H3M0 494 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 ATP7AQ04656 1500 aa15.32■□□□□ 0.04
TRIM35-201ENST00000305364 TEFQ10587 303 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 MED14O60244 1454 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 HIP1O00291 1037 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
TRIM35-201ENST00000305364 ANO10Q9NW15 660 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 RBM8AQ9Y5S9 174 aaKnown RBP15.31■□□□□ 0.04
TRIM35-201ENST00000305364 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 PPFIA3O75145 1194 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 URI1O94763 535 aaPredicted RBP15.31■□□□□ 0.04
TRIM35-201ENST00000305364 VPS53Q5VIR6 699 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 CDC37L1Q7L3B6 337 aa15.31■□□□□ 0.04
TRIM35-201ENST00000305364 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 SOS1Q07889 1333 aaPredicted RBP15.3■□□□□ 0.04
TRIM35-201ENST00000305364 NCKAP5LQ9HCH0 1330 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 WASLO00401 505 aaPredicted RBP15.3■□□□□ 0.04
TRIM35-201ENST00000305364 KIF1BO60333 1816 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 STX1AQ16623 288 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 BOLA2Q9H3K6 86 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 MRVI1Q9Y6F6 885 aa15.3■□□□□ 0.04
TRIM35-201ENST00000305364 PDILTQ8N807 584 aa15.29■□□□□ 0.04
TRIM35-201ENST00000305364 SYTL4Q96C24 671 aaPredicted RBP15.29■□□□□ 0.04
TRIM35-201ENST00000305364 ABCC1P33527 1531 aa15.29■□□□□ 0.04
TRIM35-201ENST00000305364 FBXO31Q5XUX0 539 aaPredicted RBP15.29■□□□□ 0.04
TRIM35-201ENST00000305364 TMC6Q7Z403 805 aa15.29■□□□□ 0.04
TRIM35-201ENST00000305364 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
TRIM35-201ENST00000305364 ERO1AQ96HE7 468 aa15.29■□□□□ 0.04
TRIM35-201ENST00000305364 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
TRIM35-201ENST00000305364 YTHDC2Q9H6S0 1430 aaKnown RBP15.29■□□□□ 0.04
TRIM35-201ENST00000305364 CAVIN2O95810 425 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 GUCY1B3Q02153 619 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 CCAR1Q8IX12 1150 aaKnown RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 CCDC8Q9H0W5 538 aaPredicted RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 SSH2Q76I76 1423 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 LARGE1O95461 756 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 STK38Q15208 465 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 ME3Q16798 604 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 ERC1Q8IUD2 1116 aa15.28■□□□□ 0.04
TRIM35-201ENST00000305364 CWC15Q9P013 229 aaKnown RBP15.28■□□□□ 0.04
TRIM35-201ENST00000305364 TET3O43151 1660 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 ZBTB22O15209 634 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 SERPINC1P01008 464 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 SYT10Q6XYQ8 523 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 CTNNA3Q9UI47 895 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 GSDMDP57764 484 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 AOPEPQ8N6M6 819 aa15.27■□□□□ 0.04
TRIM35-201ENST00000305364 NPATQ14207 1427 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 BIN1O00499 593 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 CTAGE5O15320 804 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 MTHFSDQ2M296 383 aaKnown RBP15.27■□□□□ 0.03
TRIM35-201ENST00000305364 ARHGAP29Q52LW3 1261 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 FSIP1Q8NA03 581 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 ANKRD7Q92527 254 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 DNAJC2Q99543 621 aaKnown RBP15.27■□□□□ 0.03
TRIM35-201ENST00000305364 CLSTN2Q9H4D0 955 aa15.27■□□□□ 0.03
TRIM35-201ENST00000305364 LEO1Q8WVC0 666 aaPredicted RBP15.26■□□□□ 0.03
TRIM35-201ENST00000305364 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 BRF1Q92994 677 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 HYPKQ9NX55 129 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
TRIM35-201ENST00000305364 SHPRHQ149N8 1683 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 NR1I2O75469 434 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 ADCK5Q3MIX3 580 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 CREB3L3Q68CJ9 461 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 EVI5LQ96CN4 794 aa15.26■□□□□ 0.03
TRIM35-201ENST00000305364 DNAI1Q9UI46 699 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms