RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 ZBTB3Q9H5J0 574 aa34.58■■■■□ 3.13
HDAC3-201ENST00000305264 TRIM27P14373 513 aa34.58■■■■□ 3.13
HDAC3-201ENST00000305264 RRP1P56182 461 aaKnown RBP34.58■■■■□ 3.13
HDAC3-201ENST00000305264 ZKSCAN2Q63HK3 967 aa34.58■■■■□ 3.13
HDAC3-201ENST00000305264 PNPLA7Q6ZV29 1317 aa34.58■■■■□ 3.13
HDAC3-201ENST00000305264 A0A087WZG4 1122 aa34.57■■■■□ 3.12
HDAC3-201ENST00000305264 PI4KAP2A4QPH2 592 aa34.57■■■■□ 3.12
HDAC3-201ENST00000305264 F6X3S4 739 aa34.57■■■■□ 3.12
HDAC3-201ENST00000305264 ANKRD13DQ6ZTN6 518 aa34.57■■■■□ 3.12
HDAC3-201ENST00000305264 PI4KAP1Q8N8J0 262 aa34.57■■■■□ 3.12
HDAC3-201ENST00000305264 MAP3K15Q6ZN16 1313 aa34.56■■■■□ 3.12
HDAC3-201ENST00000305264 DDX58O95786 925 aaKnown RBP34.56■■■■□ 3.12
HDAC3-201ENST00000305264 ATF7IPQ6VMQ6 1270 aa34.56■■■■□ 3.12
HDAC3-201ENST00000305264 ARHGAP45Q92619 1136 aa34.56■■■■□ 3.12
HDAC3-201ENST00000305264 IPO8O15397 1037 aaKnown RBP34.56■■■■□ 3.12
HDAC3-201ENST00000305264 RNF123Q5XPI4 1314 aa34.55■■■■□ 3.12
HDAC3-201ENST00000305264 CAMTA2O94983 1202 aa34.55■■■■□ 3.12
HDAC3-201ENST00000305264 KSR2Q6VAB6 950 aa34.55■■■■□ 3.12
HDAC3-201ENST00000305264 PLBD2Q8NHP8 589 aa34.55■■■■□ 3.12
HDAC3-201ENST00000305264 SRP68Q9UHB9 627 aaKnown RBP34.55■■■■□ 3.12
HDAC3-201ENST00000305264 NUP98P52948 1817 aa34.55■■■■□ 3.12
HDAC3-201ENST00000305264 MAP3K2Q9Y2U5 619 aa34.54■■■■□ 3.12
HDAC3-201ENST00000305264 RIC3Q7Z5B4 369 aa34.54■■■■□ 3.12
HDAC3-201ENST00000305264 RFC4P35249 363 aa34.53■■■■□ 3.12
HDAC3-201ENST00000305264 COL23A1Q86Y22 540 aaPredicted RBP34.53■■■■□ 3.12
HDAC3-201ENST00000305264 API5Q9BZZ5 524 aaKnown RBP34.53■■■■□ 3.12
HDAC3-201ENST00000305264 USP42Q9H9J4 1324 aaKnown RBP34.53■■■■□ 3.12
HDAC3-201ENST00000305264 CLUAP1Q96AJ1 413 aa34.53■■■■□ 3.12
HDAC3-201ENST00000305264 NARFQ9UHQ1 456 aa34.53■■■■□ 3.12
HDAC3-201ENST00000305264 HLFQ16534 295 aa34.52■■■■□ 3.12
HDAC3-201ENST00000305264 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.52■■■■□ 3.12
HDAC3-201ENST00000305264 DNAAF4Q8WXU2 420 aa34.51■■■■□ 3.11
HDAC3-201ENST00000305264 ERVV-1B6SEH8 477 aa34.5■■■■□ 3.11
HDAC3-201ENST00000305264 USPL1Q5W0Q7 1092 aa34.5■■■■□ 3.11
HDAC3-201ENST00000305264 FLAD1Q8NFF5 587 aa34.5■■■■□ 3.11
HDAC3-201ENST00000305264 ANKRD36CQ5JPF3 1778 aa34.5■■■■□ 3.11
HDAC3-201ENST00000305264 N4BP2Q86UW6 1770 aaPredicted RBP34.5■■■■□ 3.11
HDAC3-201ENST00000305264 ZPR1O75312 459 aa34.49■■■■□ 3.11
HDAC3-201ENST00000305264 ABCC4O15439 1325 aa34.49■■■■□ 3.11
HDAC3-201ENST00000305264 BCL2L12Q9HB09 334 aa34.49■■■■□ 3.11
HDAC3-201ENST00000305264 RLBP1P12271 317 aa34.48■■■■□ 3.11
HDAC3-201ENST00000305264 C20orf194Q5TEA3 1177 aa34.48■■■■□ 3.11
HDAC3-201ENST00000305264 SLC4A10Q6U841 1118 aa34.48■■■■□ 3.11
HDAC3-201ENST00000305264 PXDNLA1KZ92 1463 aa34.48■■■■□ 3.11
HDAC3-201ENST00000305264 MSH5O43196 834 aa34.47■■■■□ 3.11
HDAC3-201ENST00000305264 GIGYF2Q6Y7W6 1299 aaKnown RBP34.47■■■■□ 3.11
HDAC3-201ENST00000305264 METTL22Q9BUU2 404 aaPredicted RBP34.46■■■■□ 3.11
HDAC3-201ENST00000305264 FTSJ3Q8IY81 847 aaKnown RBP34.45■■■■□ 3.11
HDAC3-201ENST00000305264 DZIP1LQ8IYY4 767 aaKnown RBP34.45■■■■□ 3.11
HDAC3-201ENST00000305264 PANK1Q8TE04 598 aa34.45■■■■□ 3.11
HDAC3-201ENST00000305264 PDGFDQ9GZP0 370 aaPredicted RBP34.45■■■■□ 3.11
HDAC3-201ENST00000305264 MYD88Q99836 296 aa34.45■■■■□ 3.11
HDAC3-201ENST00000305264 SOCS7O14512 581 aa34.44■■■■□ 3.1
HDAC3-201ENST00000305264 AFDNP55196 1824 aaKnown RBP34.44■■■■□ 3.1
HDAC3-201ENST00000305264 GYS1P13807 737 aa34.43■■■■□ 3.1
HDAC3-201ENST00000305264 R3HDM1Q15032 1099 aaKnown RBP34.43■■■■□ 3.1
HDAC3-201ENST00000305264 ATP10DQ9P241 1426 aa34.43■■■■□ 3.1
HDAC3-201ENST00000305264 ZNF652Q9Y2D9 606 aa34.42■■■■□ 3.1
HDAC3-201ENST00000305264 CASZ1Q86V15 1759 aa34.42■■■■□ 3.1
HDAC3-201ENST00000305264 BEND3Q5T5X7 828 aa34.42■■■■□ 3.1
HDAC3-201ENST00000305264 ATP5J2-PTCD1G3V325 749 aa34.41■■■■□ 3.1
HDAC3-201ENST00000305264 TCIRG1Q13488 830 aa34.41■■■■□ 3.1
HDAC3-201ENST00000305264 FKBP8Q14318 412 aa34.41■■■■□ 3.1
HDAC3-201ENST00000305264 CLEC4GQ6UXB4 293 aa34.41■■■■□ 3.1
HDAC3-201ENST00000305264 TMEM57Q8N5G2 664 aa34.41■■■■□ 3.1
HDAC3-201ENST00000305264 IGKV5-2P06315 115 aa34.4■■■■□ 3.1
HDAC3-201ENST00000305264 RGL2O15211 777 aa34.4■■■■□ 3.1
HDAC3-201ENST00000305264 NEXNQ0ZGT2 675 aa34.4■■■■□ 3.1
HDAC3-201ENST00000305264 PDE3AQ14432 1141 aa34.4■■■■□ 3.1
HDAC3-201ENST00000305264 CWF19L2Q2TBE0 894 aaKnown RBP34.4■■■■□ 3.1
HDAC3-201ENST00000305264 GPTP24298 496 aa34.39■■■■□ 3.1
HDAC3-201ENST00000305264 HSP90AB3PQ58FF7 597 aa34.38■■■■□ 3.09
HDAC3-201ENST00000305264 MS4A1P11836 297 aa34.38■■■■□ 3.09
HDAC3-201ENST00000305264 TBC1D9BQ66K14 1250 aa34.38■■■■□ 3.09
HDAC3-201ENST00000305264 LINS1Q8NG48 757 aa34.38■■■■□ 3.09
HDAC3-201ENST00000305264 PSDA5PKW4 1024 aaPredicted RBP34.37■■■■□ 3.09
HDAC3-201ENST00000305264 INTS3Q68E01 1043 aaKnown RBP34.37■■■■□ 3.09
HDAC3-201ENST00000305264 ISCA1Q9BUE6 129 aa34.37■■■■□ 3.09
HDAC3-201ENST00000305264 UBN2Q6ZU65 1347 aa34.37■■■■□ 3.09
HDAC3-201ENST00000305264 ZNF34Q8IZ26 560 aa34.36■■■■□ 3.09
HDAC3-201ENST00000305264 SRCIN1Q9C0H9 1055 aa34.36■■■■□ 3.09
HDAC3-201ENST00000305264 CCT4P50991 539 aaKnown RBP34.36■■■■□ 3.09
HDAC3-201ENST00000305264 COL24A1Q17RW2 1714 aa34.36■■■■□ 3.09
HDAC3-201ENST00000305264 NEURL1BA8MQ27 555 aa34.35■■■■□ 3.09
HDAC3-201ENST00000305264 BICDL1Q6ZP65 573 aa34.35■■■■□ 3.09
HDAC3-201ENST00000305264 NIP7Q9Y221 180 aaKnown RBP eCLIP34.35■■■■□ 3.09
HDAC3-201ENST00000305264 COG6Q9Y2V7 657 aa34.34■■■■□ 3.09
HDAC3-201ENST00000305264 IRX6P78412 446 aaPredicted RBP34.34■■■■□ 3.09
HDAC3-201ENST00000305264 MSL1Q68DK7 614 aa34.34■■■■□ 3.09
HDAC3-201ENST00000305264 ITPRIPQ8IWB1 547 aa34.34■■■■□ 3.09
HDAC3-201ENST00000305264 NFIXQ14938 502 aa34.32■■■■□ 3.08
HDAC3-201ENST00000305264 NLRP10Q86W26 655 aa34.32■■■■□ 3.08
HDAC3-201ENST00000305264 TRIM28Q13263 835 aaKnown RBP34.31■■■■□ 3.08
HDAC3-201ENST00000305264 ALDH1L1O75891 902 aa34.31■■■■□ 3.08
HDAC3-201ENST00000305264 MVPQ14764 893 aaKnown RBP34.31■■■■□ 3.08
HDAC3-201ENST00000305264 NLGN1Q8N2Q7 840 aa34.29■■■■□ 3.08
HDAC3-201ENST00000305264 CCDC191Q8NCU4 936 aa34.29■■■■□ 3.08
HDAC3-201ENST00000305264 CWC25Q9NXE8 425 aaPredicted RBP34.29■■■■□ 3.08
HDAC3-201ENST00000305264 GCKRQ14397 625 aa34.29■■■■□ 3.08
HDAC3-201ENST00000305264 SETDB2Q96T68 719 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms