RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 ST5P78524 1137 aa20.85■□□□□ 0.93
SRGAP2C-201ENST00000304465 PDZRN3Q9UPQ7 1066 aa20.85■□□□□ 0.93
SRGAP2C-201ENST00000304465 RGL2O15211 777 aa20.84■□□□□ 0.93
SRGAP2C-201ENST00000304465 MYL6BP14649 208 aa20.84■□□□□ 0.93
SRGAP2C-201ENST00000304465 PRR5LQ6MZQ0 368 aa20.84■□□□□ 0.93
SRGAP2C-201ENST00000304465 BRIP1Q9BX63 1249 aa20.84■□□□□ 0.93
SRGAP2C-201ENST00000304465 ATP10DQ9P241 1426 aa20.84■□□□□ 0.93
SRGAP2C-201ENST00000304465 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
SRGAP2C-201ENST00000304465 NBPF5PQ86XG9 351 aaPredicted RBP20.83■□□□□ 0.93
SRGAP2C-201ENST00000304465 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.92
SRGAP2C-201ENST00000304465 NRXN2Q9P2S2 1712 aa20.83■□□□□ 0.92
SRGAP2C-201ENST00000304465 TTLL6Q8N841 843 aa20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 GPBP1L1Q9HC44 474 aaPredicted RBP20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 NIP7Q9Y221 180 aaKnown RBP eCLIP20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 SALL2Q9Y467 1007 aaPredicted RBP20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 ERBB4Q15303 1308 aa20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 LAMB4A4D0S4 1761 aa20.82■□□□□ 0.92
SRGAP2C-201ENST00000304465 EIF2S2P20042 333 aaKnown RBP20.81■□□□□ 0.92
SRGAP2C-201ENST00000304465 CCDC24Q8N4L8 307 aa20.81■□□□□ 0.92
SRGAP2C-201ENST00000304465 ZNF526Q8TF50 670 aaPredicted RBP20.81■□□□□ 0.92
SRGAP2C-201ENST00000304465 ZNF622Q969S3 477 aaKnown RBP eCLIP20.81■□□□□ 0.924e-6■□□□□ 8.2
SRGAP2C-201ENST00000304465 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
SRGAP2C-201ENST00000304465 NCBP3Q53F19 620 aaKnown RBP20.8■□□□□ 0.92
SRGAP2C-201ENST00000304465 TPTE2Q6XPS3 522 aa20.8■□□□□ 0.92
SRGAP2C-201ENST00000304465 BCORQ6W2J9 1755 aa20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 ADCY9O60503 1353 aa20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 ERVV-1B6SEH8 477 aa20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 CHL1O00533 1208 aa20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 GTF2E1P29083 439 aaPredicted RBP20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 MAP3K15Q6ZN16 1313 aa20.79■□□□□ 0.92
SRGAP2C-201ENST00000304465 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
SRGAP2C-201ENST00000304465 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
SRGAP2C-201ENST00000304465 CALD1Q05682 793 aaKnown RBP20.78■□□□□ 0.92
SRGAP2C-201ENST00000304465 HLFQ16534 295 aa20.78■□□□□ 0.92
SRGAP2C-201ENST00000304465 C9orf131Q5VYM1 1079 aa20.76■□□□□ 0.91
SRGAP2C-201ENST00000304465 TTLL7Q6ZT98 887 aa20.76■□□□□ 0.91
SRGAP2C-201ENST00000304465 ZBTB3Q9H5J0 574 aa20.76■□□□□ 0.91
SRGAP2C-201ENST00000304465 ARFGEF1Q9Y6D6 1849 aa20.76■□□□□ 0.91
SRGAP2C-201ENST00000304465 CCDC27Q2M243 656 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 NECTIN2Q92692 538 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 CNKSR1Q969H4 720 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 NYXQ9GZU5 481 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 C1QTNF8P60827 252 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 CDCA7LQ96GN5 454 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 RNF181Q9P0P0 153 aa20.75■□□□□ 0.91
SRGAP2C-201ENST00000304465 STYK1Q6J9G0 422 aa20.74■□□□□ 0.91
SRGAP2C-201ENST00000304465 MASTLQ96GX5 879 aa20.74■□□□□ 0.91
SRGAP2C-201ENST00000304465 SRGNP10124 158 aa20.73■□□□□ 0.91
SRGAP2C-201ENST00000304465 ZNF219Q9P2Y4 722 aaPredicted RBP20.73■□□□□ 0.91
SRGAP2C-201ENST00000304465 GPTP24298 496 aa20.72■□□□□ 0.91
SRGAP2C-201ENST00000304465 GNAI1P63096 354 aa20.72■□□□□ 0.91
SRGAP2C-201ENST00000304465 HDGFL1Q5TGJ6 251 aa20.72■□□□□ 0.91
SRGAP2C-201ENST00000304465 GIGYF2Q6Y7W6 1299 aaKnown RBP20.72■□□□□ 0.91
SRGAP2C-201ENST00000304465 C21orf2O43822 256 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 ANXA1P04083 346 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 HOXB7P09629 217 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 AIMP1Q12904 312 aaKnown RBP20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 PDIA6Q15084 440 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 KRT24Q2M2I5 525 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 DLEC1Q9Y238 1755 aa20.71■□□□□ 0.91
SRGAP2C-201ENST00000304465 NPR1P16066 1061 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 RASSF7Q02833 373 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 PROSER3Q2NL68 480 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 SPINK5Q9NQ38 1064 aaPredicted RBP20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 DDX21Q9NR30 783 aaKnown RBP eCLIP20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 IFT57Q9NWB7 429 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 ANKRD31Q8N7Z5 1873 aa20.7■□□□□ 0.9
SRGAP2C-201ENST00000304465 SOGA3Q5TF21 947 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 COPS6Q7L5N1 327 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 LMNB1P20700 586 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 GOLGA2Q08379 1002 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 SLFN5Q08AF3 891 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 DUSP27Q5VZP5 1158 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 PRPF40BQ6NWY9 871 aaKnown RBP20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 XAGE3Q8WTP9 111 aa20.69■□□□□ 0.9
SRGAP2C-201ENST00000304465 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
SRGAP2C-201ENST00000304465 NUTM1Q86Y26 1132 aa20.68■□□□□ 0.9
SRGAP2C-201ENST00000304465 CHPF2Q9P2E5 772 aa20.68■□□□□ 0.9
SRGAP2C-201ENST00000304465 HSP90AB3PQ58FF7 597 aa20.67■□□□□ 0.9
SRGAP2C-201ENST00000304465 ZNF34Q8IZ26 560 aa20.67■□□□□ 0.9
SRGAP2C-201ENST00000304465 DBF4Q9UBU7 674 aaPredicted RBP20.67■□□□□ 0.9
SRGAP2C-201ENST00000304465 UBN2Q6ZU65 1347 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 KDM2BQ8NHM5 1336 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 KLRG2A4D1S0 409 aaPredicted RBP20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 ZNF853P0CG23 659 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 ERFEQ4G0M1 354 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 SUSD4Q5VX71 490 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 WDR63Q8IWG1 891 aa20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
SRGAP2C-201ENST00000304465 ALDH1B1P30837 517 aa20.65■□□□□ 0.9
SRGAP2C-201ENST00000304465 CHMP4AQ9BY43 222 aa20.65■□□□□ 0.9
SRGAP2C-201ENST00000304465 COL11A2P13942 1736 aaPredicted RBP20.65■□□□□ 0.9
SRGAP2C-201ENST00000304465 ZC3H4Q9UPT8 1303 aaKnown RBP20.65■□□□□ 0.9
SRGAP2C-201ENST00000304465 NFKBIEO00221 500 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms