RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
PPP4R4-201ENST00000304338 GPTP24298 496 aa18.28■□□□□ 0.52
PPP4R4-201ENST00000304338 LMBR1LQ6UX01 489 aa18.28■□□□□ 0.52
PPP4R4-201ENST00000304338 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
PPP4R4-201ENST00000304338 NEURL1BA8MQ27 555 aa18.28■□□□□ 0.52
PPP4R4-201ENST00000304338 NFAT5O94916 1531 aa18.27■□□□□ 0.52
PPP4R4-201ENST00000304338 EXOC5O00471 708 aa18.27■□□□□ 0.51
PPP4R4-201ENST00000304338 FGD1P98174 961 aa18.27■□□□□ 0.51
PPP4R4-201ENST00000304338 IGKV5-2P06315 115 aa18.26■□□□□ 0.51
PPP4R4-201ENST00000304338 NAP1L2Q9ULW6 460 aaPredicted RBP18.26■□□□□ 0.51
PPP4R4-201ENST00000304338 SNX21Q969T3 373 aa18.26■□□□□ 0.51
PPP4R4-201ENST00000304338 TRAK2O60296 914 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 SSFA2P28290 1259 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
PPP4R4-201ENST00000304338 MEGF6O75095 1541 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 DDX11L8A8MPP1 907 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 ANTXR1Q9H6X2 564 aa18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 CWC25Q9NXE8 425 aaPredicted RBP18.24■□□□□ 0.51
PPP4R4-201ENST00000304338 STARD3NLO95772 234 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 DNAJC10Q8IXB1 793 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 CARD10Q9BWT7 1032 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 OSBPL3Q9H4L5 887 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 POLA2Q14181 598 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 PDIA6Q15084 440 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 KIF2CQ99661 725 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 EPHA10Q5JZY3 1008 aa18.23■□□□□ 0.51
PPP4R4-201ENST00000304338 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 EAF2Q96CJ1 260 aaPredicted RBP18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 DDX49Q9Y6V7 483 aaKnown RBP18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 DTNBO60941 627 aa18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 ZKSCAN1P17029 563 aaPredicted RBP18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 PRPF40BQ6NWY9 871 aaKnown RBP18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 PLBD2Q8NHP8 589 aa18.22■□□□□ 0.51
PPP4R4-201ENST00000304338 LTN1O94822 1766 aa18.21■□□□□ 0.51
PPP4R4-201ENST00000304338 TFCP2Q12800 502 aa18.21■□□□□ 0.51
PPP4R4-201ENST00000304338 EDC3Q96F86 508 aaKnown RBP18.21■□□□□ 0.51
PPP4R4-201ENST00000304338 CCDC57Q2TAC2 916 aa18.21■□□□□ 0.5
PPP4R4-201ENST00000304338 TLR7Q9NYK1 1049 aaKnown RBP18.21■□□□□ 0.5
PPP4R4-201ENST00000304338 ERVV-2B6SEH9 535 aa18.2■□□□□ 0.5
PPP4R4-201ENST00000304338 ZNF594Q96JF6 807 aaPredicted RBP18.2■□□□□ 0.5
PPP4R4-201ENST00000304338 FAM89AQ96GI7 184 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 STAP2Q9UGK3 403 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 TBC1D2BQ9UPU7 963 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 KDM6AO15550 1401 aaPredicted RBP18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 CPA1P15085 419 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 RGPD1P0DJD0 1748 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 NUCB2P80303 420 aa18.19■□□□□ 0.5
PPP4R4-201ENST00000304338 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 GOLGA6L3A6NEY3 463 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 CASTP20810 708 aaKnown RBP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 BRPF3Q9ULD4 1205 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 NBPF26B4DH59 902 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 FKBP4Q02790 459 aaKnown RBP eCLIP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 NBPF10Q6P3W6 841 aaKnown RBP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 DDX46Q7L014 1031 aaKnown RBP18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 NBPF15Q8N660 670 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 EVI5LQ96CN4 794 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 TMX3Q96JJ7 454 aa18.18■□□□□ 0.5
PPP4R4-201ENST00000304338 NPHP1O15259 732 aa18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 SASH1O94885 1247 aa18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 TIMM10P62072 90 aa18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 PI4K2BQ8TCG2 481 aa18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 CEP126Q9P2H0 1117 aa18.17■□□□□ 0.5
PPP4R4-201ENST00000304338 FAM227BQ96M60 508 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 PIGBQ92521 554 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 SNRKQ9NRH2 765 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 DCCP43146 1447 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
PPP4R4-201ENST00000304338 DBNDD2Q9BQY9 259 aa18.15■□□□□ 0.5
PPP4R4-201ENST00000304338 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
PPP4R4-201ENST00000304338 KAZALD1Q96I82 304 aa18.15■□□□□ 0.5
PPP4R4-201ENST00000304338 SGSM2O43147 1006 aa18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 GTF2E1P29083 439 aaPredicted RBP18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 NMIQ13287 307 aaPredicted RBP18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 DDB1Q16531 1140 aa18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 IL25Q9H293 177 aa18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 TRMT112Q9UI30 125 aaKnown RBP18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 PRPF40AO75400 957 aaKnown RBP18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 HSP90B1P14625 803 aaKnown RBP18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 CNNM1Q9NRU3 951 aa18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 GOLIM4O00461 696 aa18.14■□□□□ 0.49
PPP4R4-201ENST00000304338 PKP1Q13835 747 aa18.13■□□□□ 0.49
PPP4R4-201ENST00000304338 WASHC4Q2M389 1173 aa18.13■□□□□ 0.49
PPP4R4-201ENST00000304338 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms