RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 IRX5P78411 483 aaPredicted RBP16.35■□□□□ 0.21
HIPK3-201ENST00000303296 CFAP157Q5JU67 520 aa16.35■□□□□ 0.21
HIPK3-201ENST00000303296 SRGAP3O43295 1099 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 ATXN8OSP0DMR3 200 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 PSMD6Q15008 389 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 MIA2Q96PC5 1412 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 CCDC50Q8IVM0 306 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 TNIKQ9UKE5 1360 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 RASA3Q14644 834 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 CTCFLQ8NI51 663 aaPredicted RBP16.34■□□□□ 0.21
HIPK3-201ENST00000303296 PANK2Q9BZ23 570 aa16.34■□□□□ 0.21
HIPK3-201ENST00000303296 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.21
HIPK3-201ENST00000303296 FMN1Q68DA7 1419 aa16.33■□□□□ 0.21
HIPK3-201ENST00000303296 MIPOL1Q8TD10 442 aa16.33■□□□□ 0.21
HIPK3-201ENST00000303296 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.2
HIPK3-201ENST00000303296 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 GOLGA8AA7E2F4 631 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.2
HIPK3-201ENST00000303296 CEP57Q86XR8 500 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 RPGRQ92834 1020 aaKnown RBP16.33■□□□□ 0.2
HIPK3-201ENST00000303296 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.2
HIPK3-201ENST00000303296 FAM160A1Q05DH4 1040 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 PLS1Q14651 629 aa16.33■□□□□ 0.2
HIPK3-201ENST00000303296 CCDC194A0A1B0GVG4 234 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 SARNPP82979 210 aaKnown RBP16.32■□□□□ 0.2
HIPK3-201ENST00000303296 ANO10Q9NW15 660 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 PPME1Q9Y570 386 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 USP47Q96K76 1375 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 TMC6Q7Z403 805 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 PLCB3Q01970 1234 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
HIPK3-201ENST00000303296 FAM114A1Q8IWE2 563 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 NSRP1Q9H0G5 558 aaKnown RBP16.32■□□□□ 0.2
HIPK3-201ENST00000303296 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 SLC12A7Q9Y666 1083 aa16.32■□□□□ 0.2
HIPK3-201ENST00000303296 NUTM1Q86Y26 1132 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 WDR66Q8TBY9 1149 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 CIZ1Q9ULV3 898 aaPredicted RBP16.31■□□□□ 0.2
HIPK3-201ENST00000303296 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 A0A087WZG4 1122 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 CCDC170Q8IYT3 715 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 PPP6R1Q9UPN7 881 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 IQCA1Q86XH1 822 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 C16orf71Q8IYS4 520 aaPredicted RBP16.31■□□□□ 0.2
HIPK3-201ENST00000303296 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
HIPK3-201ENST00000303296 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
HIPK3-201ENST00000303296 STXBP4Q6ZWJ1 553 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 ATRIPQ8WXE1 791 aa16.31■□□□□ 0.2
HIPK3-201ENST00000303296 CCDC117Q8IWD4 279 aaPredicted RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 MPHOSPH6Q99547 160 aaKnown RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 ANKFY1Q9P2R3 1169 aa16.3■□□□□ 0.2
HIPK3-201ENST00000303296 ARID5AQ03989 594 aa16.3■□□□□ 0.2
HIPK3-201ENST00000303296 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
HIPK3-201ENST00000303296 TACC3Q9Y6A5 838 aa16.3■□□□□ 0.2
HIPK3-201ENST00000303296 UAP1Q16222 522 aaPredicted RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 ZNF530Q6P9A1 599 aaPredicted RBP16.3■□□□□ 0.2
HIPK3-201ENST00000303296 GABPAQ06546 454 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 KRT32Q14532 448 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 CCDC25Q86WR0 208 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
HIPK3-201ENST00000303296 ANKS4BQ8N8V4 417 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 BIN2Q9UBW5 565 aaPredicted RBP16.29■□□□□ 0.2
HIPK3-201ENST00000303296 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 ARID4AP29374 1257 aaPredicted RBP16.29■□□□□ 0.2
HIPK3-201ENST00000303296 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
HIPK3-201ENST00000303296 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 CCT4P50991 539 aaKnown RBP16.29■□□□□ 0.2
HIPK3-201ENST00000303296 GCC1Q96CN9 775 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 TCP11L1Q9NUJ3 509 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 ZNF652Q9Y2D9 606 aa16.29■□□□□ 0.2
HIPK3-201ENST00000303296 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
HIPK3-201ENST00000303296 TRIM7Q9C029 511 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 WDR63Q8IWG1 891 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
HIPK3-201ENST00000303296 SEC62Q99442 399 aaKnown RBP16.28■□□□□ 0.2
HIPK3-201ENST00000303296 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 KCNK9Q9NPC2 374 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 GAS8O95995 478 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 AMPD3Q01432 767 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 SRCIN1Q9C0H9 1055 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 CATIPQ7Z7H3 387 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 BOLA2Q9H3K6 86 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
HIPK3-201ENST00000303296 PPP1R12AO14974 1030 aaPredicted RBP16.27■□□□□ 0.2
HIPK3-201ENST00000303296 IFIT3O14879 490 aaKnown RBP16.27■□□□□ 0.2
HIPK3-201ENST00000303296 PTGS1P23219 599 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 DIXDC1Q155Q3 683 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 IFI16Q16666 785 aaKnown RBP16.27■□□□□ 0.2
HIPK3-201ENST00000303296 PPP4R3BQ5MIZ7 849 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 ATF7IPQ6VMQ6 1270 aa16.27■□□□□ 0.2
HIPK3-201ENST00000303296 VPS52Q8N1B4 723 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms